RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 TPCN2Q8NHX9 752 aa12.94□□□□□ -0.34
BDNF-218ENST00000533246 SLC20A1Q8WUM9 679 aa12.94□□□□□ -0.34
BDNF-218ENST00000533246 DHX35Q9H5Z1 703 aaKnown RBP12.94□□□□□ -0.34
BDNF-218ENST00000533246 MYOZ2Q9NPC6 264 aa12.94□□□□□ -0.34
BDNF-218ENST00000533246 MRGBPQ9NV56 204 aa12.94□□□□□ -0.34
BDNF-218ENST00000533246 LGR5O75473 907 aa12.94□□□□□ -0.34
BDNF-218ENST00000533246 BCAR1P56945 870 aa12.94□□□□□ -0.34
BDNF-218ENST00000533246 TMPRSS15P98073 1019 aa12.94□□□□□ -0.34
BDNF-218ENST00000533246 RBBP8NLQ8NC74 664 aaPredicted RBP12.94□□□□□ -0.34
BDNF-218ENST00000533246 RIT2Q99578 217 aa12.94□□□□□ -0.34
BDNF-218ENST00000533246 ACP6Q9NPH0 428 aa12.94□□□□□ -0.34
BDNF-218ENST00000533246 ZNF232Q9UNY5 417 aa12.94□□□□□ -0.34
BDNF-218ENST00000533246 AGAP1Q9UPQ3 857 aa12.94□□□□□ -0.34
BDNF-218ENST00000533246 TSC22D4Q9Y3Q8 395 aa12.94□□□□□ -0.34
BDNF-218ENST00000533246 NWD1Q149M9 1564 aa12.93□□□□□ -0.34
BDNF-218ENST00000533246 SPDYE16A6NNV3 312 aaPredicted RBP12.93□□□□□ -0.34
BDNF-218ENST00000533246 KRT3P12035 628 aa12.93□□□□□ -0.34
BDNF-218ENST00000533246 MDH1P40925 334 aaKnown RBP12.93□□□□□ -0.34
BDNF-218ENST00000533246 CASP5P51878 434 aa12.93□□□□□ -0.34
BDNF-218ENST00000533246 ARL4CP56559 192 aa12.93□□□□□ -0.34
BDNF-218ENST00000533246 SPDYE2Q495Y8 402 aa12.93□□□□□ -0.34
BDNF-218ENST00000533246 DSTYKQ6XUX3 929 aa12.93□□□□□ -0.34
BDNF-218ENST00000533246 SLC51AQ86UW1 340 aa12.93□□□□□ -0.34
BDNF-218ENST00000533246 CASKIN2Q8WXE0 1202 aa12.93□□□□□ -0.34
BDNF-218ENST00000533246 KIF12Q96FN5 646 aa12.93□□□□□ -0.34
BDNF-218ENST00000533246 ATXN7L3BQ96GX2 97 aa12.93□□□□□ -0.34
BDNF-218ENST00000533246 MCEEQ96PE7 176 aa12.93□□□□□ -0.34
BDNF-218ENST00000533246 RAB3IPQ96QF0 476 aaPredicted RBP12.93□□□□□ -0.34
BDNF-218ENST00000533246 SLC16A3O15427 465 aaKnown RBP12.93□□□□□ -0.34
BDNF-218ENST00000533246 XPOTO43592 962 aaKnown RBP12.93□□□□□ -0.34
BDNF-218ENST00000533246 GPC4O75487 556 aa12.93□□□□□ -0.34
BDNF-218ENST00000533246 NCF2P19878 526 aaPredicted RBP12.93□□□□□ -0.34
BDNF-218ENST00000533246 SDC4P31431 198 aa12.93□□□□□ -0.34
BDNF-218ENST00000533246 CAP2P40123 477 aa12.93□□□□□ -0.34
BDNF-218ENST00000533246 RHBDL3P58872 404 aa12.93□□□□□ -0.34
BDNF-218ENST00000533246 SPARCL1Q14515 664 aa12.93□□□□□ -0.34
BDNF-218ENST00000533246 SH3RF1Q7Z6J0 888 aa12.93□□□□□ -0.34
BDNF-218ENST00000533246 LONP2Q86WA8 852 aa12.93□□□□□ -0.34
BDNF-218ENST00000533246 MFN1Q8IWA4 741 aa12.93□□□□□ -0.34
BDNF-218ENST00000533246 TAS1R2Q8TE23 839 aa12.93□□□□□ -0.34
BDNF-218ENST00000533246 HVCN1Q96D96 273 aa12.93□□□□□ -0.34
BDNF-218ENST00000533246 CHMP6Q96FZ7 201 aa12.93□□□□□ -0.34
BDNF-218ENST00000533246 CYTH2Q99418 400 aa12.93□□□□□ -0.34
BDNF-218ENST00000533246 MAF1Q9H063 256 aa12.93□□□□□ -0.34
BDNF-218ENST00000533246 SNX9Q9Y5X1 595 aa12.93□□□□□ -0.34
BDNF-218ENST00000533246 CCDC195A0A1B0GUA6 201 aa12.93□□□□□ -0.34
BDNF-218ENST00000533246 FAM187AA6NFU0 413 aa12.93□□□□□ -0.34
BDNF-218ENST00000533246 TCP11X1B4DZS4 312 aa12.93□□□□□ -0.34
BDNF-218ENST00000533246 PRKCBP05771 671 aa12.93□□□□□ -0.34
BDNF-218ENST00000533246 PDGFRBP09619 1106 aa12.93□□□□□ -0.34
BDNF-218ENST00000533246 LSP1P33241 339 aa12.93□□□□□ -0.34
BDNF-218ENST00000533246 SREBF1P36956 1147 aa12.93□□□□□ -0.34
BDNF-218ENST00000533246 RNASELQ05823 741 aaKnown RBP12.93□□□□□ -0.34
BDNF-218ENST00000533246 SPATA24Q86W54 205 aa12.93□□□□□ -0.34
BDNF-218ENST00000533246 RYBPQ8N488 228 aaPredicted RBP12.93□□□□□ -0.34
BDNF-218ENST00000533246 CERS5Q8N5B7 392 aa12.93□□□□□ -0.34
BDNF-218ENST00000533246 LPAR1Q92633 364 aa12.93□□□□□ -0.34
BDNF-218ENST00000533246 PRMT1Q99873 361 aaKnown RBP12.93□□□□□ -0.34
BDNF-218ENST00000533246 IKZF4Q9H2S9 585 aa12.93□□□□□ -0.34
BDNF-218ENST00000533246 IFT122Q9HBG6 1241 aa12.93□□□□□ -0.34
BDNF-218ENST00000533246 SUCLA2Q9P2R7 463 aaPredicted RBP12.93□□□□□ -0.34
BDNF-218ENST00000533246 PPARGC1AQ9UBK2 798 aaKnown RBP12.93□□□□□ -0.34
BDNF-218ENST00000533246 DIS3Q9Y2L1 958 aaKnown RBP12.93□□□□□ -0.34
BDNF-218ENST00000533246 RIC1Q4ADV7 1423 aa12.93□□□□□ -0.34
BDNF-218ENST00000533246 CFLARO15519 480 aa12.92□□□□□ -0.34
BDNF-218ENST00000533246 CALB1P05937 261 aa12.92□□□□□ -0.34
BDNF-218ENST00000533246 TCHHQ07283 1943 aa12.92□□□□□ -0.34
BDNF-218ENST00000533246 SURF1Q15526 300 aa12.92□□□□□ -0.34
BDNF-218ENST00000533246 TKFCQ3LXA3 575 aa12.92□□□□□ -0.34
BDNF-218ENST00000533246 KAT2BQ92831 832 aa12.92□□□□□ -0.34
BDNF-218ENST00000533246 AKT1S1Q96B36 256 aa12.92□□□□□ -0.34
BDNF-218ENST00000533246 RBM15Q96T37 977 aaKnown RBP eCLIP12.92□□□□□ -0.34
BDNF-218ENST00000533246 FAM49BQ9NUQ9 324 aa12.92□□□□□ -0.34
BDNF-218ENST00000533246 FAF1Q9UNN5 650 aaPredicted RBP12.92□□□□□ -0.34
BDNF-218ENST00000533246 RIMS1Q86UR5 1692 aaKnown RBP12.92□□□□□ -0.34
BDNF-218ENST00000533246 RCCD1A6NED2 376 aa12.92□□□□□ -0.34
BDNF-218ENST00000533246 A8MXQ7 604 aa12.92□□□□□ -0.34
BDNF-218ENST00000533246 ESRRAP11474 423 aaPredicted RBP12.92□□□□□ -0.34
BDNF-218ENST00000533246 IL1R1P14778 569 aa12.92□□□□□ -0.34
BDNF-218ENST00000533246 PHKA2P46019 1235 aa12.92□□□□□ -0.34
BDNF-218ENST00000533246 NOP14P78316 857 aaKnown RBP12.92□□□□□ -0.34
BDNF-218ENST00000533246 NME3Q13232 169 aa12.92□□□□□ -0.34
BDNF-218ENST00000533246 NBPF12Q5TAG4 269 aaPredicted RBP12.92□□□□□ -0.34
BDNF-218ENST00000533246 AGR3Q8TD06 166 aa12.92□□□□□ -0.34
BDNF-218ENST00000533246 C18orf8Q96DM3 657 aa12.92□□□□□ -0.34
BDNF-218ENST00000533246 FAXDC2Q96IV6 333 aa12.92□□□□□ -0.34
BDNF-218ENST00000533246 TGS1Q96RS0 853 aaKnown RBP12.92□□□□□ -0.34
BDNF-218ENST00000533246 OSBPL8Q9BZF1 889 aa12.92□□□□□ -0.34
BDNF-218ENST00000533246 SIK2Q9H0K1 926 aa12.92□□□□□ -0.34
BDNF-218ENST00000533246 CXCL9Q07325 125 aa12.92□□□□□ -0.34
BDNF-218ENST00000533246 ASPHQ12797 758 aa12.92□□□□□ -0.34
BDNF-218ENST00000533246 EMC2Q15006 297 aa12.92□□□□□ -0.34
BDNF-218ENST00000533246 P3H1Q32P28 736 aa12.92□□□□□ -0.34
BDNF-218ENST00000533246 CYP4A22Q5TCH4 519 aa12.92□□□□□ -0.34
BDNF-218ENST00000533246 SPOPLQ6IQ16 392 aa12.92□□□□□ -0.34
BDNF-218ENST00000533246 CYB5D1Q6P9G0 228 aa12.92□□□□□ -0.34
BDNF-218ENST00000533246 ZNF720Q7Z2F6 126 aa12.92□□□□□ -0.34
BDNF-218ENST00000533246 KDELC2Q7Z4H8 507 aa12.92□□□□□ -0.34
BDNF-218ENST00000533246 EXOC8Q8IYI6 725 aa12.92□□□□□ -0.34
BDNF-218ENST00000533246 MMGT1Q8N4V1 131 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms