RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 EEPD1Q7L9B9 569 aa16.39■□□□□ 0.21
CACNA1E-208ENST00000533229 PASD1Q8IV76 773 aa16.39■□□□□ 0.21
CACNA1E-208ENST00000533229 EFCAB13Q8IY85 973 aa16.39■□□□□ 0.21
CACNA1E-208ENST00000533229 C1orf54Q8WWF1 131 aa16.39■□□□□ 0.21
CACNA1E-208ENST00000533229 PABPC3Q9H361 631 aaKnown RBP16.39■□□□□ 0.21
CACNA1E-208ENST00000533229 SEMA4AQ9H3S1 761 aa16.39■□□□□ 0.21
CACNA1E-208ENST00000533229 MTUS1Q9ULD2 1270 aa16.39■□□□□ 0.21
CACNA1E-208ENST00000533229 NUB1Q9Y5A7 615 aa16.39■□□□□ 0.21
CACNA1E-208ENST00000533229 CD2APQ9Y5K6 639 aa16.39■□□□□ 0.21
CACNA1E-208ENST00000533229 LCTP09848 1927 aa16.38■□□□□ 0.21
CACNA1E-208ENST00000533229 WDR81Q562E7 1941 aa16.38■□□□□ 0.21
CACNA1E-208ENST00000533229 EBAG9O00559 213 aa16.38■□□□□ 0.21
CACNA1E-208ENST00000533229 FSCN2O14926 492 aa16.38■□□□□ 0.21
CACNA1E-208ENST00000533229 TP73O15350 636 aa16.38■□□□□ 0.21
CACNA1E-208ENST00000533229 CORO7P57737 925 aa16.38■□□□□ 0.21
CACNA1E-208ENST00000533229 MAGOHP61326 146 aaKnown RBP16.38■□□□□ 0.21
CACNA1E-208ENST00000533229 SPDYCQ5MJ68 293 aa16.38■□□□□ 0.21
CACNA1E-208ENST00000533229 AGBL2Q5U5Z8 902 aa16.38■□□□□ 0.21
CACNA1E-208ENST00000533229 TMEM270Q6UE05 265 aa16.38■□□□□ 0.21
CACNA1E-208ENST00000533229 ZNF677Q86XU0 584 aa16.38■□□□□ 0.21
CACNA1E-208ENST00000533229 LRRC19Q9H756 370 aa16.38■□□□□ 0.21
CACNA1E-208ENST00000533229 AVENQ9NQS1 362 aaPredicted RBP16.38■□□□□ 0.21
CACNA1E-208ENST00000533229 KCNG1Q9UIX4 513 aa16.38■□□□□ 0.21
CACNA1E-208ENST00000533229 CAND2O75155 1236 aa16.37■□□□□ 0.21
CACNA1E-208ENST00000533229 HARSP12081 509 aaKnown RBP16.37■□□□□ 0.21
CACNA1E-208ENST00000533229 EDNRBP24530 442 aa16.37■□□□□ 0.21
CACNA1E-208ENST00000533229 TNFSF9P41273 254 aa16.37■□□□□ 0.21
CACNA1E-208ENST00000533229 NSFP46459 744 aaKnown RBP16.37■□□□□ 0.21
CACNA1E-208ENST00000533229 IFFO1Q0D2I5 559 aa16.37■□□□□ 0.21
CACNA1E-208ENST00000533229 SLC29A2Q14542 456 aa16.37■□□□□ 0.21
CACNA1E-208ENST00000533229 SLFN12LQ6IEE8 588 aa16.37■□□□□ 0.21
CACNA1E-208ENST00000533229 C12orf50Q8NA57 414 aaPredicted RBP16.37■□□□□ 0.21
CACNA1E-208ENST00000533229 FAM81BQ96LP2 452 aa16.37■□□□□ 0.21
CACNA1E-208ENST00000533229 MAF1Q9H063 256 aa16.37■□□□□ 0.21
CACNA1E-208ENST00000533229 CHST7Q9NS84 486 aa16.37■□□□□ 0.21
CACNA1E-208ENST00000533229 PPP2R3BQ9Y5P8 575 aa16.37■□□□□ 0.21
CACNA1E-208ENST00000533229 CST3P01034 146 aaPredicted RBP16.37■□□□□ 0.21
CACNA1E-208ENST00000533229 NUDT17P0C025 328 aa16.37■□□□□ 0.21
CACNA1E-208ENST00000533229 STAT5BP51692 787 aa16.37■□□□□ 0.21
CACNA1E-208ENST00000533229 SNX1Q13596 522 aa16.37■□□□□ 0.21
CACNA1E-208ENST00000533229 LY6KQ17RY6 165 aa16.37■□□□□ 0.21
CACNA1E-208ENST00000533229 ODF2Q5BJF6 829 aa16.37■□□□□ 0.21
CACNA1E-208ENST00000533229 RIOX2Q8IUF8 465 aa16.37■□□□□ 0.21
CACNA1E-208ENST00000533229 ATG4AQ8WYN0 398 aa16.37■□□□□ 0.21
CACNA1E-208ENST00000533229 ART4Q93070 314 aa16.37■□□□□ 0.21
CACNA1E-208ENST00000533229 CGRRF1Q99675 332 aa16.37■□□□□ 0.21
CACNA1E-208ENST00000533229 C11orf70Q9BRQ4 267 aa16.37■□□□□ 0.21
CACNA1E-208ENST00000533229 TSPYL1Q9H0U9 437 aa16.37■□□□□ 0.21
CACNA1E-208ENST00000533229 RASSF4Q9H2L5 321 aa16.37■□□□□ 0.21
CACNA1E-208ENST00000533229 PCDHB4Q9Y5E5 795 aa16.37■□□□□ 0.21
CACNA1E-208ENST00000533229 ADCY3O60266 1144 aa16.36■□□□□ 0.21
CACNA1E-208ENST00000533229 ERLIN2O94905 339 aa16.36■□□□□ 0.21
CACNA1E-208ENST00000533229 LDHAP00338 332 aaKnown RBP16.36■□□□□ 0.21
CACNA1E-208ENST00000533229 TCF7P36402 384 aaPredicted RBP16.36■□□□□ 0.21
CACNA1E-208ENST00000533229 FNTAP49354 379 aa16.36■□□□□ 0.21
CACNA1E-208ENST00000533229 BPIFB4P59827 614 aa16.36■□□□□ 0.21
CACNA1E-208ENST00000533229 NOMO3P69849 1222 aa16.36■□□□□ 0.21
CACNA1E-208ENST00000533229 NCAPG2Q86XI2 1143 aa16.36■□□□□ 0.21
CACNA1E-208ENST00000533229 ABRAQ8N0Z2 381 aa16.36■□□□□ 0.21
CACNA1E-208ENST00000533229 PRPF31Q8WWY3 499 aaKnown RBP16.36■□□□□ 0.21
CACNA1E-208ENST00000533229 DDX27Q96GQ7 796 aaKnown RBP16.36■□□□□ 0.21
CACNA1E-208ENST00000533229 CCT8L2Q96SF2 557 aa16.36■□□□□ 0.21
CACNA1E-208ENST00000533229 TMEM134Q9H6X4 195 aa16.36■□□□□ 0.21
CACNA1E-208ENST00000533229 PPANQ9NQ55 473 aaKnown RBP16.36■□□□□ 0.21
CACNA1E-208ENST00000533229 FAM169AQ9Y6X4 670 aa16.36■□□□□ 0.21
CACNA1E-208ENST00000533229 ZNFX1Q9P2E3 1918 aaKnown RBP16.36■□□□□ 0.21
CACNA1E-208ENST00000533229 FAM189A1O60320 539 aa16.36■□□□□ 0.21
CACNA1E-208ENST00000533229 ARIH2O95376 493 aa16.36■□□□□ 0.21
CACNA1E-208ENST00000533229 GJB6O95452 261 aa16.36■□□□□ 0.21
CACNA1E-208ENST00000533229 CLTAP09496 248 aa16.36■□□□□ 0.21
CACNA1E-208ENST00000533229 MYBL1P10243 752 aa16.36■□□□□ 0.21
CACNA1E-208ENST00000533229 FGFR4P22455 802 aa16.36■□□□□ 0.21
CACNA1E-208ENST00000533229 GNA15P30679 374 aa16.36■□□□□ 0.21
CACNA1E-208ENST00000533229 EIF3BP55884 814 aaKnown RBP16.36■□□□□ 0.21
CACNA1E-208ENST00000533229 PPP2R2AP63151 447 aa16.36■□□□□ 0.21
CACNA1E-208ENST00000533229 NOP14P78316 857 aaKnown RBP16.36■□□□□ 0.21
CACNA1E-208ENST00000533229 SGO2Q562F6 1265 aa16.36■□□□□ 0.21
CACNA1E-208ENST00000533229 GPC2Q8N158 579 aa16.36■□□□□ 0.21
CACNA1E-208ENST00000533229 ARFGAP2Q8N6H7 521 aa16.36■□□□□ 0.21
CACNA1E-208ENST00000533229 MYCBPAPQ8TBZ2 947 aa16.36■□□□□ 0.21
CACNA1E-208ENST00000533229 TLCD1Q96CP7 247 aa16.36■□□□□ 0.21
CACNA1E-208ENST00000533229 SPATC1LQ9H0A9 340 aa16.36■□□□□ 0.21
CACNA1E-208ENST00000533229 MAFO75444 373 aaPredicted RBP16.35■□□□□ 0.21
CACNA1E-208ENST00000533229 ECEL1O95672 775 aa16.35■□□□□ 0.21
CACNA1E-208ENST00000533229 RFC5P40937 340 aa16.35■□□□□ 0.21
CACNA1E-208ENST00000533229 PTP4A2Q12974 167 aa16.35■□□□□ 0.21
CACNA1E-208ENST00000533229 MAMLD1Q13495 774 aa16.35■□□□□ 0.21
CACNA1E-208ENST00000533229 R3HDM1Q15032 1099 aaKnown RBP16.35■□□□□ 0.21
CACNA1E-208ENST00000533229 NLRP14Q86W24 1093 aa16.35■□□□□ 0.21
CACNA1E-208ENST00000533229 RBBP8NLQ8NC74 664 aaPredicted RBP16.35■□□□□ 0.21
CACNA1E-208ENST00000533229 UHMK1Q8TAS1 419 aaKnown RBP16.35■□□□□ 0.21
CACNA1E-208ENST00000533229 ZNF473Q8WTR7 871 aaKnown RBP16.35■□□□□ 0.21
CACNA1E-208ENST00000533229 NRBP2Q9NSY0 501 aa16.35■□□□□ 0.21
CACNA1E-208ENST00000533229 CNTN6Q9UQ52 1028 aa16.35■□□□□ 0.21
CACNA1E-208ENST00000533229 E7EVH7 732 aa16.34■□□□□ 0.21
CACNA1E-208ENST00000533229 MSCO60682 206 aa16.34■□□□□ 0.21
CACNA1E-208ENST00000533229 PROSCO94903 275 aa16.34■□□□□ 0.21
CACNA1E-208ENST00000533229 MARK3P27448 753 aa16.34■□□□□ 0.21
CACNA1E-208ENST00000533229 TAS2R40P59535 323 aa16.34■□□□□ 0.21
CACNA1E-208ENST00000533229 NCOA4Q13772 614 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms