RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 TGFB3P10600 412 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 CYP2C8P10632 490 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 HIST1H2ADP20671 130 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 PID1Q7Z2X4 250 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 SLC7A14Q8TBB6 771 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 PIK3R5Q8WYR1 880 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 RNF25Q96BH1 459 aaPredicted RBP11.31□□□□□ -0.6
COLCA1-203ENST00000532918 HIST1H2AHQ96KK5 128 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 HIST1H2AJQ99878 128 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 AGPAT1Q99943 283 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 REEP2Q9BRK0 252 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 H2AFJQ9BTM1 129 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 CAPS2Q9BXY5 557 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 TRIM15Q9C019 465 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 KIAA1683Q9H0B3 1180 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.31□□□□□ -0.6
COLCA1-203ENST00000532918 NFU1Q9UMS0 254 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 SPATA31D1Q6ZQQ2 1576 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 PP2D1A8MPX8 630 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 HMBSP08397 361 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 PDGFRBP09619 1106 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 DSG3P32926 999 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 EPHB3P54753 998 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 C10orf120Q5SQS8 335 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 MRPL9Q9BYD2 267 aaKnown RBP11.31□□□□□ -0.6
COLCA1-203ENST00000532918 GLIS2Q9BZE0 524 aaPredicted RBP11.31□□□□□ -0.6
COLCA1-203ENST00000532918 KDM4FA0A1W2PPD8 638 aa11.3□□□□□ -0.6
COLCA1-203ENST00000532918 COPEO14579 308 aa11.3□□□□□ -0.6
COLCA1-203ENST00000532918 FKBP1BP68106 108 aa11.3□□□□□ -0.6
COLCA1-203ENST00000532918 DEUP1Q05D60 604 aa11.3□□□□□ -0.6
COLCA1-203ENST00000532918 NOGQ13253 232 aa11.3□□□□□ -0.6
COLCA1-203ENST00000532918 PLA2G4FQ68DD2 849 aa11.3□□□□□ -0.6
COLCA1-203ENST00000532918 PDZD8Q8NEN9 1154 aa11.3□□□□□ -0.6
COLCA1-203ENST00000532918 CDCA5Q96FF9 252 aa11.3□□□□□ -0.6
COLCA1-203ENST00000532918 MKL2Q9ULH7 1088 aa11.3□□□□□ -0.6
COLCA1-203ENST00000532918 SALL1Q9NSC2 1324 aa11.3□□□□□ -0.6
COLCA1-203ENST00000532918 UBA6A0AVT1 1052 aaPredicted RBP11.3□□□□□ -0.6
COLCA1-203ENST00000532918 MAN1A2O60476 641 aa11.3□□□□□ -0.6
COLCA1-203ENST00000532918 BTN2A1Q7KYR7 527 aa11.3□□□□□ -0.6
COLCA1-203ENST00000532918 BCAS4Q8TDM0 211 aa11.3□□□□□ -0.6
COLCA1-203ENST00000532918 HEMGNQ9BXL5 484 aa11.3□□□□□ -0.6
COLCA1-203ENST00000532918 EMILIN2Q9BXX0 1053 aa11.3□□□□□ -0.6
COLCA1-203ENST00000532918 NIF3L1Q9GZT8 377 aa11.3□□□□□ -0.6
COLCA1-203ENST00000532918 MSRAQ9UJ68 235 aa11.3□□□□□ -0.6
COLCA1-203ENST00000532918 CYP11B2P19099 503 aa11.3□□□□□ -0.6
COLCA1-203ENST00000532918 FXR2P51116 673 aaKnown RBP eCLIP11.3□□□□□ -0.6
COLCA1-203ENST00000532918 COPS2P61201 443 aa11.3□□□□□ -0.6
COLCA1-203ENST00000532918 NOP14P78316 857 aaKnown RBP11.3□□□□□ -0.6
COLCA1-203ENST00000532918 ART3Q13508 389 aa11.3□□□□□ -0.6
COLCA1-203ENST00000532918 PDIA6Q15084 440 aa11.3□□□□□ -0.6
COLCA1-203ENST00000532918 EDRF1Q3B7T1 1238 aa11.3□□□□□ -0.6
COLCA1-203ENST00000532918 LMBRD2Q68DH5 695 aaPredicted RBP11.3□□□□□ -0.6
COLCA1-203ENST00000532918 LZICQ8WZA0 190 aa11.3□□□□□ -0.6
COLCA1-203ENST00000532918 RAPGEF5Q92565 580 aa11.3□□□□□ -0.6
COLCA1-203ENST00000532918 MKNK1Q9BUB5 465 aa11.3□□□□□ -0.6
COLCA1-203ENST00000532918 RNF208Q9H0X6 261 aa11.3□□□□□ -0.6
COLCA1-203ENST00000532918 NAGPAQ9UK23 515 aa11.3□□□□□ -0.6
COLCA1-203ENST00000532918 A0A1W2PQC6 194 aa11.3□□□□□ -0.6
COLCA1-203ENST00000532918 PDGFRAP16234 1089 aa11.3□□□□□ -0.6
COLCA1-203ENST00000532918 SKOR1P84550 965 aa11.3□□□□□ -0.6
COLCA1-203ENST00000532918 IL1RL1Q01638 556 aa11.3□□□□□ -0.6
COLCA1-203ENST00000532918 SZRD1Q7Z422 152 aa11.3□□□□□ -0.6
COLCA1-203ENST00000532918 DAGLBQ8NCG7 672 aa11.3□□□□□ -0.6
COLCA1-203ENST00000532918 HPDLQ96IR7 371 aa11.3□□□□□ -0.6
COLCA1-203ENST00000532918 SERPINI1Q99574 410 aa11.3□□□□□ -0.6
COLCA1-203ENST00000532918 ABHD16BQ9H3Z7 469 aa11.3□□□□□ -0.6
COLCA1-203ENST00000532918 TMEM8AQ9HCN3 771 aa11.3□□□□□ -0.6
COLCA1-203ENST00000532918 XPNPEP3Q9NQH7 507 aa11.3□□□□□ -0.6
COLCA1-203ENST00000532918 RRP15Q9Y3B9 282 aaKnown RBP11.3□□□□□ -0.6
COLCA1-203ENST00000532918 SLC30A1Q9Y6M5 507 aa11.3□□□□□ -0.6
COLCA1-203ENST00000532918 PALMO75781 387 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 PRKCQQ04759 706 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 PPIL2Q13356 520 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 P3H1Q32P28 736 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 ZNF280DQ6N043 979 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 RASSF3Q86WH2 238 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 OOSP2Q86WS3 158 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 CHSY1Q86X52 802 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 RBBP8NLQ8NC74 664 aaPredicted RBP11.29□□□□□ -0.6
COLCA1-203ENST00000532918 TSC22D3Q99576 134 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 TRIM9Q9C026 710 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 THG1LQ9NWX6 298 aaKnown RBP11.29□□□□□ -0.6
COLCA1-203ENST00000532918 LRRIQ1Q96JM4 1722 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 PREX1Q8TCU6 1659 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 EEF2KO00418 725 aaKnown RBP11.29□□□□□ -0.6
COLCA1-203ENST00000532918 C2CD2LO14523 706 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 FKTNO75072 461 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 TRPA1O75762 1119 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 AKT1P31749 480 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 RAP1GDS1P52306 607 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 ANKRD40Q6AI12 368 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 TAF2Q6P1X5 1199 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 NUDCD3Q8IVD9 361 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 FBXO16Q8IX29 292 aaPredicted RBP11.29□□□□□ -0.6
COLCA1-203ENST00000532918 RCOR2Q8IZ40 523 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 ACER1Q8TDN7 264 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 RFFLQ8WZ73 363 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 STK33Q9BYT3 514 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 APEX2Q9UBZ4 518 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 PGK2P07205 417 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms