RNA–Protein interactions for RNA: ENST00000532904.5

UBXN1-213, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-213ENST00000532904 L3MBTL3Q96JM7 780 aaPredicted RBP19.19■□□□□ 0.66
UBXN1-213ENST00000532904 SERPINB12Q96P63 405 aa19.19■□□□□ 0.66
UBXN1-213ENST00000532904 CBWD1Q9BRT8 395 aa19.19■□□□□ 0.66
UBXN1-213ENST00000532904 SYT17Q9BSW7 474 aa19.19■□□□□ 0.66
UBXN1-213ENST00000532904 NOD2Q9HC29 1040 aa19.19■□□□□ 0.66
UBXN1-213ENST00000532904 GTF3C4Q9UKN8 822 aa19.19■□□□□ 0.66
UBXN1-213ENST00000532904 ADM5C9JUS6 153 aa19.18■□□□□ 0.66
UBXN1-213ENST00000532904 SOCS7O14512 581 aa19.18■□□□□ 0.66
UBXN1-213ENST00000532904 PLS3P13797 630 aa19.18■□□□□ 0.66
UBXN1-213ENST00000532904 KCNA2P16389 499 aa19.18■□□□□ 0.66
UBXN1-213ENST00000532904 FMO1Q01740 532 aa19.18■□□□□ 0.66
UBXN1-213ENST00000532904 GNPTABQ3T906 1256 aa19.18■□□□□ 0.66
UBXN1-213ENST00000532904 CCDC38Q502W7 563 aa19.18■□□□□ 0.66
UBXN1-213ENST00000532904 USP50Q70EL3 339 aaPredicted RBP19.18■□□□□ 0.66
UBXN1-213ENST00000532904 XXYLT1Q8NBI6 393 aa19.18■□□□□ 0.66
UBXN1-213ENST00000532904 BTBD6Q96KE9 485 aa19.18■□□□□ 0.66
UBXN1-213ENST00000532904 KREMEN1Q96MU8 473 aa19.18■□□□□ 0.66
UBXN1-213ENST00000532904 CCDC113Q9H0I3 377 aa19.18■□□□□ 0.66
UBXN1-213ENST00000532904 CDC42EP4Q9H3Q1 356 aaKnown RBP19.18■□□□□ 0.66
UBXN1-213ENST00000532904 AAASQ9NRG9 546 aa19.18■□□□□ 0.66
UBXN1-213ENST00000532904 UVRAGQ9P2Y5 699 aa19.18■□□□□ 0.66
UBXN1-213ENST00000532904 FSCN2O14926 492 aa19.18■□□□□ 0.66
UBXN1-213ENST00000532904 TP73O15350 636 aa19.18■□□□□ 0.66
UBXN1-213ENST00000532904 RGS20O76081 388 aa19.18■□□□□ 0.66
UBXN1-213ENST00000532904 MXI1P50539 228 aa19.18■□□□□ 0.66
UBXN1-213ENST00000532904 MCCD1P59942 119 aaPredicted RBP19.18■□□□□ 0.66
UBXN1-213ENST00000532904 UGCGQ16739 394 aa19.18■□□□□ 0.66
UBXN1-213ENST00000532904 RHBDF2Q6PJF5 856 aa19.18■□□□□ 0.66
UBXN1-213ENST00000532904 CCDC25Q86WR0 208 aa19.18■□□□□ 0.66
UBXN1-213ENST00000532904 RIOX2Q8IUF8 465 aa19.18■□□□□ 0.66
UBXN1-213ENST00000532904 PSPC1Q8WXF1 523 aaKnown RBP19.18■□□□□ 0.66
UBXN1-213ENST00000532904 TMEM117Q9H0C3 514 aa19.18■□□□□ 0.66
UBXN1-213ENST00000532904 ATP6V0A4Q9HBG4 840 aa19.18■□□□□ 0.66
UBXN1-213ENST00000532904 ABCF3Q9NUQ8 709 aa19.18■□□□□ 0.66
UBXN1-213ENST00000532904 HSPBP1Q9NZL4 362 aa19.18■□□□□ 0.66
UBXN1-213ENST00000532904 A0A0G2JLL6 359 aaPredicted RBP19.17■□□□□ 0.66
UBXN1-213ENST00000532904 SPATA31C2B4DYI2 1134 aa19.17■□□□□ 0.66
UBXN1-213ENST00000532904 CXCL11O14625 94 aa19.17■□□□□ 0.66
UBXN1-213ENST00000532904 CYP26A1O43174 497 aa19.17■□□□□ 0.66
UBXN1-213ENST00000532904 SNRPFP62306 86 aaKnown RBP19.17■□□□□ 0.66
UBXN1-213ENST00000532904 TREML2Q5T2D2 321 aa19.17■□□□□ 0.66
UBXN1-213ENST00000532904 C9orf131Q5VYM1 1079 aa19.17■□□□□ 0.66
UBXN1-213ENST00000532904 PRRT2Q7Z6L0 340 aaPredicted RBP19.17■□□□□ 0.66
UBXN1-213ENST00000532904 ERO1BQ86YB8 467 aa19.17■□□□□ 0.66
UBXN1-213ENST00000532904 SHC3Q92529 594 aa19.17■□□□□ 0.66
UBXN1-213ENST00000532904 ZNF653Q96CK0 615 aa19.17■□□□□ 0.66
UBXN1-213ENST00000532904 DDX23Q9BUQ8 820 aaKnown RBP19.17■□□□□ 0.66
UBXN1-213ENST00000532904 ARID2Q68CP9 1835 aa19.17■□□□□ 0.66
UBXN1-213ENST00000532904 MFAP3P55082 362 aa19.16■□□□□ 0.66
UBXN1-213ENST00000532904 SF3A3Q12874 501 aaKnown RBP eCLIP19.16■□□□□ 0.66
UBXN1-213ENST00000532904 LONRF1Q17RB8 773 aa19.16■□□□□ 0.66
UBXN1-213ENST00000532904 FAM133BQ5BKY9 247 aaKnown RBP19.16■□□□□ 0.66
UBXN1-213ENST00000532904 DPY19L2Q6NUT2 758 aa19.16■□□□□ 0.66
UBXN1-213ENST00000532904 CRELD2Q6UXH1 353 aaPredicted RBP19.16■□□□□ 0.66
UBXN1-213ENST00000532904 SLC47A2Q86VL8 602 aa19.16■□□□□ 0.66
UBXN1-213ENST00000532904 ARHGEF2Q92974 986 aaKnown RBP19.16■□□□□ 0.66
UBXN1-213ENST00000532904 ATP6V0A1Q93050 837 aa19.16■□□□□ 0.66
UBXN1-213ENST00000532904 USP15Q9Y4E8 981 aaPredicted RBP19.16■□□□□ 0.66
UBXN1-213ENST00000532904 YBX3P16989 372 aaKnown RBP eCLIP19.16■□□□□ 0.66
UBXN1-213ENST00000532904 ITIH2P19823 946 aa19.16■□□□□ 0.66
UBXN1-213ENST00000532904 ATP5DP30049 168 aa19.16■□□□□ 0.66
UBXN1-213ENST00000532904 ICAM3P32942 547 aa19.16■□□□□ 0.66
UBXN1-213ENST00000532904 KRT17Q04695 432 aa19.16■□□□□ 0.66
UBXN1-213ENST00000532904 E2F5Q15329 346 aa19.16■□□□□ 0.66
UBXN1-213ENST00000532904 VSTM1Q6UX27 236 aa19.16■□□□□ 0.66
UBXN1-213ENST00000532904 OTUD6AQ7L8S5 288 aa19.16■□□□□ 0.66
UBXN1-213ENST00000532904 ANKRD13AQ8IZ07 590 aa19.16■□□□□ 0.66
UBXN1-213ENST00000532904 POP1Q99575 1024 aaKnown RBP19.16■□□□□ 0.66
UBXN1-213ENST00000532904 BAIAP2L1Q9UHR4 511 aa19.16■□□□□ 0.66
UBXN1-213ENST00000532904 AGAP1Q9UPQ3 857 aa19.16■□□□□ 0.66
UBXN1-213ENST00000532904 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.16■□□□□ 0.66
UBXN1-213ENST00000532904 IRF6O14896 467 aa19.15■□□□□ 0.66
UBXN1-213ENST00000532904 PSAPP07602 524 aa19.15■□□□□ 0.66
UBXN1-213ENST00000532904 DLATP10515 647 aaKnown RBP19.15■□□□□ 0.66
UBXN1-213ENST00000532904 GALNTL6Q49A17 601 aa19.15■□□□□ 0.66
UBXN1-213ENST00000532904 SYDE1Q6ZW31 735 aaPredicted RBP19.15■□□□□ 0.66
UBXN1-213ENST00000532904 MAEAQ7L5Y9 396 aa19.15■□□□□ 0.66
UBXN1-213ENST00000532904 ZSWIM2Q8NEG5 633 aa19.15■□□□□ 0.66
UBXN1-213ENST00000532904 DYDC1Q8WWB3 177 aa19.15■□□□□ 0.66
UBXN1-213ENST00000532904 N4BP2L2Q92802 583 aaPredicted RBP19.15■□□□□ 0.66
UBXN1-213ENST00000532904 PLVAPQ9BX97 442 aa19.15■□□□□ 0.66
UBXN1-213ENST00000532904 ACP6Q9NPH0 428 aa19.15■□□□□ 0.66
UBXN1-213ENST00000532904 DOCK5Q9H7D0 1870 aa19.15■□□□□ 0.66
UBXN1-213ENST00000532904 MYH9P35579 1960 aaKnown RBP19.15■□□□□ 0.66
UBXN1-213ENST00000532904 TMEM120BA0PK00 339 aa19.15■□□□□ 0.66
UBXN1-213ENST00000532904 CLDN3O15551 220 aa19.15■□□□□ 0.66
UBXN1-213ENST00000532904 UBOX5O94941 541 aa19.15■□□□□ 0.66
UBXN1-213ENST00000532904 CYP11B1P15538 503 aa19.15■□□□□ 0.66
UBXN1-213ENST00000532904 GTF2BQ00403 316 aa19.15■□□□□ 0.66
UBXN1-213ENST00000532904 CDR2Q01850 454 aa19.15■□□□□ 0.66
UBXN1-213ENST00000532904 STXBP2Q15833 593 aa19.15■□□□□ 0.66
UBXN1-213ENST00000532904 SGO2Q562F6 1265 aa19.15■□□□□ 0.66
UBXN1-213ENST00000532904 TLDC1Q6P9B6 456 aa19.15■□□□□ 0.66
UBXN1-213ENST00000532904 TBC1D1Q86TI0 1168 aaPredicted RBP19.15■□□□□ 0.66
UBXN1-213ENST00000532904 PPM1KQ8N3J5 372 aa19.15■□□□□ 0.66
UBXN1-213ENST00000532904 TCP11Q8WWU5 503 aa19.15■□□□□ 0.66
UBXN1-213ENST00000532904 JPH1Q9HDC5 661 aaPredicted RBP19.15■□□□□ 0.66
UBXN1-213ENST00000532904 SLC9A2Q9UBY0 812 aa19.15■□□□□ 0.66
UBXN1-213ENST00000532904 KCNH4Q9UQ05 1017 aa19.15■□□□□ 0.66
UBXN1-213ENST00000532904 SPDYE5A6NIY4 337 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms