RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 DCLRE1AQ6PJP8 1040 aa26.91■■□□□ 1.9
USP48-214ENST00000532737 TRIML1Q8N9V2 468 aa26.91■■□□□ 1.9
USP48-214ENST00000532737 HASPINQ8TF76 798 aa26.91■■□□□ 1.9
USP48-214ENST00000532737 DDX27Q96GQ7 796 aaKnown RBP26.91■■□□□ 1.9
USP48-214ENST00000532737 TLR9Q9NR96 1032 aa26.91■■□□□ 1.9
USP48-214ENST00000532737 ADAM28Q9UKQ2 775 aa26.91■■□□□ 1.9
USP48-214ENST00000532737 C2CD2Q9Y426 696 aa26.91■■□□□ 1.9
USP48-214ENST00000532737 MYO7AQ13402 2215 aa26.9■■□□□ 1.9
USP48-214ENST00000532737 PLXNA4Q9HCM2 1894 aa26.9■■□□□ 1.9
USP48-214ENST00000532737 B3GAT3O94766 335 aa26.9■■□□□ 1.9
USP48-214ENST00000532737 RPL9P32969 192 aaKnown RBP26.9■■□□□ 1.9
USP48-214ENST00000532737 CASP4P49662 377 aa26.9■■□□□ 1.9
USP48-214ENST00000532737 PMS1P54277 932 aaKnown RBP26.9■■□□□ 1.9
USP48-214ENST00000532737 NFIL3Q16649 462 aa26.9■■□□□ 1.9
USP48-214ENST00000532737 TAS1R1Q7RTX1 841 aa26.9■■□□□ 1.9
USP48-214ENST00000532737 VPS52Q8N1B4 723 aa26.9■■□□□ 1.9
USP48-214ENST00000532737 C3orf58Q8NDZ4 430 aa26.9■■□□□ 1.9
USP48-214ENST00000532737 TCF20Q9UGU0 1960 aaKnown RBP26.89■■□□□ 1.9
USP48-214ENST00000532737 TMEM189-UBE2V1I3L0A0 370 aa26.89■■□□□ 1.9
USP48-214ENST00000532737 PODXLO00592 558 aa26.89■■□□□ 1.9
USP48-214ENST00000532737 FSCN2O14926 492 aa26.89■■□□□ 1.9
USP48-214ENST00000532737 XPOTO43592 962 aaKnown RBP26.89■■□□□ 1.9
USP48-214ENST00000532737 LRPAP1P30533 357 aa26.89■■□□□ 1.9
USP48-214ENST00000532737 CYP24A1Q07973 514 aa26.89■■□□□ 1.9
USP48-214ENST00000532737 MICALL1Q8N3F8 863 aa26.89■■□□□ 1.9
USP48-214ENST00000532737 BEST2Q8NFU1 509 aa26.89■■□□□ 1.9
USP48-214ENST00000532737 MICAL1Q8TDZ2 1067 aa26.89■■□□□ 1.9
USP48-214ENST00000532737 FAM84AQ96KN4 292 aa26.89■■□□□ 1.9
USP48-214ENST00000532737 ASB2Q96Q27 587 aa26.89■■□□□ 1.9
USP48-214ENST00000532737 TCF25Q9BQ70 676 aa26.89■■□□□ 1.9
USP48-214ENST00000532737 GPR62Q9BZJ7 368 aa26.89■■□□□ 1.9
USP48-214ENST00000532737 NR2F2P24468 414 aa26.88■■□□□ 1.89
USP48-214ENST00000532737 STIM1Q13586 685 aa26.88■■□□□ 1.89
USP48-214ENST00000532737 PSMD6Q15008 389 aa26.88■■□□□ 1.89
USP48-214ENST00000532737 EDRF1Q3B7T1 1238 aa26.88■■□□□ 1.89
USP48-214ENST00000532737 ANKRD40Q6AI12 368 aa26.88■■□□□ 1.89
USP48-214ENST00000532737 FUT10Q6P4F1 479 aa26.88■■□□□ 1.89
USP48-214ENST00000532737 TMC7Q7Z402 723 aa26.88■■□□□ 1.89
USP48-214ENST00000532737 RNF168Q8IYW5 571 aaPredicted RBP26.88■■□□□ 1.89
USP48-214ENST00000532737 DHTKD1Q96HY7 919 aaPredicted RBP26.88■■□□□ 1.89
USP48-214ENST00000532737 MFSD14AQ96MC6 490 aa26.88■■□□□ 1.89
USP48-214ENST00000532737 ZBP1Q9H171 429 aa26.88■■□□□ 1.89
USP48-214ENST00000532737 GTF3C5Q9Y5Q8 519 aaPredicted RBP26.88■■□□□ 1.89
USP48-214ENST00000532737 PSMA7O14818 248 aa26.87■■□□□ 1.89
USP48-214ENST00000532737 CCNE1P24864 410 aa26.87■■□□□ 1.89
USP48-214ENST00000532737 PPP1R2P41236 205 aa26.87■■□□□ 1.89
USP48-214ENST00000532737 TFAMQ00059 246 aaKnown RBP26.87■■□□□ 1.89
USP48-214ENST00000532737 CEP135Q66GS9 1140 aa26.87■■□□□ 1.89
USP48-214ENST00000532737 KLHL10Q6JEL2 608 aa26.87■■□□□ 1.89
USP48-214ENST00000532737 NT5DC4Q86YG4 428 aa26.87■■□□□ 1.89
USP48-214ENST00000532737 PLEKHO2Q8TD55 490 aa26.87■■□□□ 1.89
USP48-214ENST00000532737 HERC2P3Q9BVR0 1158 aa26.87■■□□□ 1.89
USP48-214ENST00000532737 GZF1Q9H116 711 aaPredicted RBP26.87■■□□□ 1.89
USP48-214ENST00000532737 ENTPD7Q9NQZ7 604 aa26.87■■□□□ 1.89
USP48-214ENST00000532737 DPP3Q9NY33 737 aa26.87■■□□□ 1.89
USP48-214ENST00000532737 BDP1A6H8Y1 2624 aa26.87■■□□□ 1.89
USP48-214ENST00000532737 PTPRJQ12913 1337 aa26.87■■□□□ 1.89
USP48-214ENST00000532737 TRIM49BA6NDI0 452 aa26.86■■□□□ 1.89
USP48-214ENST00000532737 PPEF2O14830 753 aa26.86■■□□□ 1.89
USP48-214ENST00000532737 SOD2P04179 222 aa26.86■■□□□ 1.89
USP48-214ENST00000532737 ANK1P16157 1881 aa26.86■■□□□ 1.89
USP48-214ENST00000532737 RPL13P26373 211 aaKnown RBP26.86■■□□□ 1.89
USP48-214ENST00000532737 ADAM9Q13443 819 aa26.86■■□□□ 1.89
USP48-214ENST00000532737 PDCD11Q14690 1871 aaKnown RBP26.86■■□□□ 1.89
USP48-214ENST00000532737 SURF1Q15526 300 aa26.86■■□□□ 1.89
USP48-214ENST00000532737 TIGD5Q53EQ6 642 aa26.86■■□□□ 1.89
USP48-214ENST00000532737 PLPP4Q5VZY2 271 aa26.86■■□□□ 1.89
USP48-214ENST00000532737 LMBRD2Q68DH5 695 aaPredicted RBP26.86■■□□□ 1.89
USP48-214ENST00000532737 AUTS2Q8WXX7 1259 aa26.86■■□□□ 1.89
USP48-214ENST00000532737 CCDC127Q96BQ5 260 aa26.86■■□□□ 1.89
USP48-214ENST00000532737 NSUN3Q9H649 340 aaKnown RBP26.86■■□□□ 1.89
USP48-214ENST00000532737 SF3B1O75533 1304 aaKnown RBP eCLIP26.86■■□□□ 1.895e-6■■■■□ 20.1
USP48-214ENST00000532737 HIDE1A8MVS5 230 aa26.85■■□□□ 1.89
USP48-214ENST00000532737 TNFRSF10AO00220 468 aa26.85■■□□□ 1.89
USP48-214ENST00000532737 AKAP3O75969 853 aa26.85■■□□□ 1.89
USP48-214ENST00000532737 CXCL14O95715 111 aa26.85■■□□□ 1.89
USP48-214ENST00000532737 CTSAP10619 480 aa26.85■■□□□ 1.89
USP48-214ENST00000532737 BRCC3P46736 316 aa26.85■■□□□ 1.89
USP48-214ENST00000532737 TCEAL5Q5H9L2 206 aa26.85■■□□□ 1.89
USP48-214ENST00000532737 C9orf57Q5W0N0 161 aa26.85■■□□□ 1.89
USP48-214ENST00000532737 PDE12Q6L8Q7 609 aaKnown RBP26.85■■□□□ 1.89
USP48-214ENST00000532737 OR5B17Q8NGF7 314 aa26.85■■□□□ 1.89
USP48-214ENST00000532737 NELFBQ8WX92 580 aa26.85■■□□□ 1.89
USP48-214ENST00000532737 EEF2KMTQ96G04 330 aa26.85■■□□□ 1.89
USP48-214ENST00000532737 B3GALT6Q96L58 329 aa26.85■■□□□ 1.89
USP48-214ENST00000532737 POP1Q99575 1024 aaKnown RBP26.85■■□□□ 1.89
USP48-214ENST00000532737 TSG101Q99816 390 aa26.85■■□□□ 1.89
USP48-214ENST00000532737 NGRNQ9NPE2 291 aaKnown RBP26.85■■□□□ 1.89
USP48-214ENST00000532737 INTS13Q9NVM9 706 aa26.85■■□□□ 1.89
USP48-214ENST00000532737 STK39Q9UEW8 545 aa26.85■■□□□ 1.89
USP48-214ENST00000532737 FRMD4BQ9Y2L6 1034 aa26.85■■□□□ 1.89
USP48-214ENST00000532737 ANO9A1A5B4 782 aa26.84■■□□□ 1.89
USP48-214ENST00000532737 I3L4J1 428 aa26.84■■□□□ 1.89
USP48-214ENST00000532737 DLATP10515 647 aaKnown RBP26.84■■□□□ 1.89
USP48-214ENST00000532737 MRPS5P82675 430 aaKnown RBP26.84■■□□□ 1.89
USP48-214ENST00000532737 LRRC63Q05C16 580 aa26.84■■□□□ 1.89
USP48-214ENST00000532737 SCARA3Q6AZY7 606 aa26.84■■□□□ 1.89
USP48-214ENST00000532737 RBM43Q6ZSC3 357 aaKnown RBP26.84■■□□□ 1.89
USP48-214ENST00000532737 ADGRD2Q7Z7M1 963 aa26.84■■□□□ 1.89
USP48-214ENST00000532737 MRPL43Q8N983 215 aaKnown RBP26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms