RNA–Protein interactions for RNA: ENST00000532708.5

TRAF3IP2-212, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,956 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-212ENST00000532708 RRP9O43818 475 aaKnown RBP12.91□□□□□ -0.34
TRAF3IP2-212ENST00000532708 LPXNO60711 386 aa12.91□□□□□ -0.34
TRAF3IP2-212ENST00000532708 DNAJB1P25685 340 aa12.91□□□□□ -0.34
TRAF3IP2-212ENST00000532708 DLG4P78352 724 aa12.91□□□□□ -0.34
TRAF3IP2-212ENST00000532708 HSP90AA2PQ14568 343 aaPredicted RBP12.91□□□□□ -0.34
TRAF3IP2-212ENST00000532708 PSMD6Q15008 389 aa12.91□□□□□ -0.34
TRAF3IP2-212ENST00000532708 SKOR2Q2VWA4 1001 aaPredicted RBP12.91□□□□□ -0.34
TRAF3IP2-212ENST00000532708 SPATA1Q5VX52 437 aa12.91□□□□□ -0.34
TRAF3IP2-212ENST00000532708 C3orf58Q8NDZ4 430 aa12.91□□□□□ -0.34
TRAF3IP2-212ENST00000532708 OR5B17Q8NGF7 314 aa12.91□□□□□ -0.34
TRAF3IP2-212ENST00000532708 SPPL3Q8TCT6 385 aa12.91□□□□□ -0.34
TRAF3IP2-212ENST00000532708 TMEM169Q96HH4 297 aa12.91□□□□□ -0.34
TRAF3IP2-212ENST00000532708 FNBP1Q96RU3 617 aa12.91□□□□□ -0.34
TRAF3IP2-212ENST00000532708 GZF1Q9H116 711 aaPredicted RBP12.91□□□□□ -0.34
TRAF3IP2-212ENST00000532708 C2CD2Q9Y426 696 aa12.91□□□□□ -0.34
TRAF3IP2-212ENST00000532708 BICDL2A1A5D9 508 aa12.9□□□□□ -0.34
TRAF3IP2-212ENST00000532708 PODXLO00592 558 aa12.9□□□□□ -0.34
TRAF3IP2-212ENST00000532708 PPEF2O14830 753 aa12.9□□□□□ -0.34
TRAF3IP2-212ENST00000532708 B3GAT3O94766 335 aa12.9□□□□□ -0.34
TRAF3IP2-212ENST00000532708 KIF4AO95239 1232 aa12.9□□□□□ -0.34
TRAF3IP2-212ENST00000532708 TNNI1P19237 187 aa12.9□□□□□ -0.34
TRAF3IP2-212ENST00000532708 PPM1AP35813 382 aa12.9□□□□□ -0.34
TRAF3IP2-212ENST00000532708 PSMC2P35998 433 aaKnown RBP12.9□□□□□ -0.34
TRAF3IP2-212ENST00000532708 KRT17Q04695 432 aa12.9□□□□□ -0.34
TRAF3IP2-212ENST00000532708 FAM186BQ8IYM0 893 aa12.9□□□□□ -0.34
TRAF3IP2-212ENST00000532708 CSGALNACT2Q8N6G5 542 aa12.9□□□□□ -0.34
TRAF3IP2-212ENST00000532708 BEST2Q8NFU1 509 aa12.9□□□□□ -0.34
TRAF3IP2-212ENST00000532708 POF1BQ8WVV4 589 aa12.9□□□□□ -0.34
TRAF3IP2-212ENST00000532708 COLEC11Q9BWP8 271 aa12.9□□□□□ -0.34
TRAF3IP2-212ENST00000532708 MTMR12Q9C0I1 747 aa12.9□□□□□ -0.34
TRAF3IP2-212ENST00000532708 DPP3Q9NY33 737 aa12.9□□□□□ -0.34
TRAF3IP2-212ENST00000532708 RWDD2AQ9UIY3 292 aa12.9□□□□□ -0.34
TRAF3IP2-212ENST00000532708 DERAQ9Y315 318 aa12.9□□□□□ -0.34
TRAF3IP2-212ENST00000532708 SYCE3A1L190 88 aa12.9□□□□□ -0.34
TRAF3IP2-212ENST00000532708 XPOTO43592 962 aaKnown RBP12.9□□□□□ -0.34
TRAF3IP2-212ENST00000532708 TADA2AO75478 443 aa12.9□□□□□ -0.34
TRAF3IP2-212ENST00000532708 PLCB3Q01970 1234 aa12.9□□□□□ -0.34
TRAF3IP2-212ENST00000532708 ADGRE1Q14246 886 aa12.9□□□□□ -0.34
TRAF3IP2-212ENST00000532708 SURF1Q15526 300 aa12.9□□□□□ -0.34
TRAF3IP2-212ENST00000532708 DCLRE1AQ6PJP8 1040 aa12.9□□□□□ -0.34
TRAF3IP2-212ENST00000532708 TAS1R1Q7RTX1 841 aa12.9□□□□□ -0.34
TRAF3IP2-212ENST00000532708 ZC3H3Q8IXZ2 948 aaKnown RBP12.9□□□□□ -0.34
TRAF3IP2-212ENST00000532708 PARD3BQ8TEW8 1205 aa12.9□□□□□ -0.34
TRAF3IP2-212ENST00000532708 ZNF516Q92618 1163 aa12.9□□□□□ -0.34
TRAF3IP2-212ENST00000532708 UROC1Q96N76 676 aa12.9□□□□□ -0.34
TRAF3IP2-212ENST00000532708 VN1R3Q9BXE9 311 aa12.9□□□□□ -0.34
TRAF3IP2-212ENST00000532708 SRRTQ9BXP5 876 aaKnown RBP12.9□□□□□ -0.34
TRAF3IP2-212ENST00000532708 INTS13Q9NVM9 706 aa12.9□□□□□ -0.34
TRAF3IP2-212ENST00000532708 LRRIQ3A6PVS8 624 aaPredicted RBP12.89□□□□□ -0.35
TRAF3IP2-212ENST00000532708 I3L4J1 428 aa12.89□□□□□ -0.35
TRAF3IP2-212ENST00000532708 TMEM191BP0C7N4 346 aa12.89□□□□□ -0.35
TRAF3IP2-212ENST00000532708 CYP3A5P20815 502 aa12.89□□□□□ -0.35
TRAF3IP2-212ENST00000532708 IGFBP4P22692 258 aa12.89□□□□□ -0.35
TRAF3IP2-212ENST00000532708 RPL9P32969 192 aaKnown RBP12.89□□□□□ -0.35
TRAF3IP2-212ENST00000532708 TYRO3Q06418 890 aa12.89□□□□□ -0.35
TRAF3IP2-212ENST00000532708 CAMK1Q14012 370 aa12.89□□□□□ -0.35
TRAF3IP2-212ENST00000532708 CD300LGQ6UXG3 332 aa12.89□□□□□ -0.35
TRAF3IP2-212ENST00000532708 C11orf57Q6ZUT1 292 aaPredicted RBP12.89□□□□□ -0.35
TRAF3IP2-212ENST00000532708 WDR49Q8IV35 697 aa12.89□□□□□ -0.35
TRAF3IP2-212ENST00000532708 C1orf127Q8N9H9 656 aa12.89□□□□□ -0.35
TRAF3IP2-212ENST00000532708 CACTINQ8WUQ7 758 aaKnown RBP12.89□□□□□ -0.35
TRAF3IP2-212ENST00000532708 MYLIPQ8WY64 445 aa12.89□□□□□ -0.35
TRAF3IP2-212ENST00000532708 DDX27Q96GQ7 796 aaKnown RBP12.89□□□□□ -0.35
TRAF3IP2-212ENST00000532708 GUCD1Q96NT3 240 aa12.89□□□□□ -0.35
TRAF3IP2-212ENST00000532708 TSPAN18Q96SJ8 248 aa12.89□□□□□ -0.35
TRAF3IP2-212ENST00000532708 CDX2Q99626 313 aaPredicted RBP12.89□□□□□ -0.35
TRAF3IP2-212ENST00000532708 CGRRF1Q99675 332 aa12.89□□□□□ -0.35
TRAF3IP2-212ENST00000532708 GPR62Q9BZJ7 368 aa12.89□□□□□ -0.35
TRAF3IP2-212ENST00000532708 ANO10Q9NW15 660 aa12.89□□□□□ -0.35
TRAF3IP2-212ENST00000532708 MTMR10Q9NXD2 777 aa12.89□□□□□ -0.35
TRAF3IP2-212ENST00000532708 DACH1Q9UI36 760 aa12.89□□□□□ -0.35
TRAF3IP2-212ENST00000532708 ADAM28Q9UKQ2 775 aa12.89□□□□□ -0.35
TRAF3IP2-212ENST00000532708 PCDHGC5Q9Y5F6 944 aa12.89□□□□□ -0.35
TRAF3IP2-212ENST00000532708 PRUNE2Q8WUY3 3088 aa12.89□□□□□ -0.35
TRAF3IP2-212ENST00000532708 COL4A4P53420 1690 aaPredicted RBP12.89□□□□□ -0.35
TRAF3IP2-212ENST00000532708 ITGB3P05106 788 aa12.89□□□□□ -0.35
TRAF3IP2-212ENST00000532708 TRIM49P0CI25 452 aa12.89□□□□□ -0.35
TRAF3IP2-212ENST00000532708 TRIM49CP0CI26 452 aa12.89□□□□□ -0.35
TRAF3IP2-212ENST00000532708 EPB41P11171 864 aaKnown RBP12.89□□□□□ -0.35
TRAF3IP2-212ENST00000532708 LRPAP1P30533 357 aa12.89□□□□□ -0.35
TRAF3IP2-212ENST00000532708 BRCC3P46736 316 aa12.89□□□□□ -0.35
TRAF3IP2-212ENST00000532708 VAMP7P51809 220 aa12.89□□□□□ -0.35
TRAF3IP2-212ENST00000532708 ERVFC1P60507 584 aa12.89□□□□□ -0.35
TRAF3IP2-212ENST00000532708 STX1AQ16623 288 aa12.89□□□□□ -0.35
TRAF3IP2-212ENST00000532708 DUOXA2Q1HG44 320 aa12.89□□□□□ -0.35
TRAF3IP2-212ENST00000532708 C1orf220Q5T0J3 134 aa12.89□□□□□ -0.35
TRAF3IP2-212ENST00000532708 C9orf57Q5W0N0 161 aa12.89□□□□□ -0.35
TRAF3IP2-212ENST00000532708 FUT10Q6P4F1 479 aa12.89□□□□□ -0.35
TRAF3IP2-212ENST00000532708 NT5DC4Q86YG4 428 aa12.89□□□□□ -0.35
TRAF3IP2-212ENST00000532708 VPS52Q8N1B4 723 aa12.89□□□□□ -0.35
TRAF3IP2-212ENST00000532708 BORCS6Q96GS4 357 aa12.89□□□□□ -0.35
TRAF3IP2-212ENST00000532708 ANKRD36BP1Q96IX9 119 aa12.89□□□□□ -0.35
TRAF3IP2-212ENST00000532708 B3GALT6Q96L58 329 aa12.89□□□□□ -0.35
TRAF3IP2-212ENST00000532708 DNAJC25Q9H1X3 360 aa12.89□□□□□ -0.35
TRAF3IP2-212ENST00000532708 PUF60Q9UHX1 559 aaKnown RBP12.89□□□□□ -0.35
TRAF3IP2-212ENST00000532708 SCN1AP35498 2009 aa12.89□□□□□ -0.35
TRAF3IP2-212ENST00000532708 PRRC2BQ5JSZ5 2229 aaKnown RBP12.88□□□□□ -0.35
TRAF3IP2-212ENST00000532708 MAPK13O15264 365 aa12.88□□□□□ -0.35
TRAF3IP2-212ENST00000532708 TNNC2P02585 160 aa12.88□□□□□ -0.35
TRAF3IP2-212ENST00000532708 KRT19P08727 400 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms