RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 PLEKHA4Q9H4M7 779 aa19.44■□□□□ 0.7
SMG1-203ENST00000532700 HCFC1R1Q9NWW0 138 aa19.44■□□□□ 0.7
SMG1-203ENST00000532700 LACTBL1A8MY62 500 aa19.43■□□□□ 0.7
SMG1-203ENST00000532700 NRG2O14511 850 aaPredicted RBP19.43■□□□□ 0.7
SMG1-203ENST00000532700 HNRNPDLO14979 420 aaKnown RBP19.43■□□□□ 0.7
SMG1-203ENST00000532700 CCL16O15467 120 aa19.43■□□□□ 0.7
SMG1-203ENST00000532700 KRT18P05783 430 aaKnown RBP19.43■□□□□ 0.7
SMG1-203ENST00000532700 C8AP07357 584 aa19.43■□□□□ 0.7
SMG1-203ENST00000532700 ELAVL2Q12926 359 aaKnown RBP19.43■□□□□ 0.7
SMG1-203ENST00000532700 MTMR3Q13615 1198 aa19.43■□□□□ 0.7
SMG1-203ENST00000532700 PKP1Q13835 747 aa19.43■□□□□ 0.7
SMG1-203ENST00000532700 RAB33AQ14088 237 aa19.43■□□□□ 0.7
SMG1-203ENST00000532700 SLC39A14Q15043 492 aa19.43■□□□□ 0.7
SMG1-203ENST00000532700 ZBTB6Q15916 424 aa19.43■□□□□ 0.7
SMG1-203ENST00000532700 VARS2Q5ST30 1063 aaKnown RBP19.43■□□□□ 0.7
SMG1-203ENST00000532700 FBXL6Q8N531 539 aa19.43■□□□□ 0.7
SMG1-203ENST00000532700 ZSWIM2Q8NEG5 633 aa19.43■□□□□ 0.7
SMG1-203ENST00000532700 SLC7A14Q8TBB6 771 aa19.43■□□□□ 0.7
SMG1-203ENST00000532700 RHOBTB2Q9BYZ6 727 aa19.43■□□□□ 0.7
SMG1-203ENST00000532700 KCNK12Q9HB15 430 aa19.43■□□□□ 0.7
SMG1-203ENST00000532700 ZDHHC7Q9NXF8 308 aa19.43■□□□□ 0.7
SMG1-203ENST00000532700 TFIP11Q9UBB9 837 aaKnown RBP19.43■□□□□ 0.7
SMG1-203ENST00000532700 TBC1D4O60343 1298 aa19.42■□□□□ 0.7
SMG1-203ENST00000532700 GBP2P32456 591 aaPredicted RBP19.42■□□□□ 0.7
SMG1-203ENST00000532700 MATR3P43243 847 aaKnown RBP eCLIP19.42■□□□□ 0.7
SMG1-203ENST00000532700 NASPP49321 788 aaPredicted RBP19.42■□□□□ 0.7
SMG1-203ENST00000532700 LIG4P49917 911 aa19.42■□□□□ 0.7
SMG1-203ENST00000532700 CASP5P51878 434 aa19.42■□□□□ 0.7
SMG1-203ENST00000532700 WNT7BP56706 349 aa19.42■□□□□ 0.7
SMG1-203ENST00000532700 GTF2BQ00403 316 aa19.42■□□□□ 0.7
SMG1-203ENST00000532700 CREMQ03060 361 aa19.42■□□□□ 0.7
SMG1-203ENST00000532700 GET4Q7L5D6 327 aaPredicted RBP19.42■□□□□ 0.7
SMG1-203ENST00000532700 OTOP3Q7RTS5 596 aa19.42■□□□□ 0.7
SMG1-203ENST00000532700 GRASPQ7Z6J2 395 aaPredicted RBP19.42■□□□□ 0.7
SMG1-203ENST00000532700 MAP4K3Q8IVH8 894 aa19.42■□□□□ 0.7
SMG1-203ENST00000532700 DDX12PQ92771 950 aa19.42■□□□□ 0.7
SMG1-203ENST00000532700 SLC38A7Q9NVC3 462 aa19.42■□□□□ 0.7
SMG1-203ENST00000532700 TBC1D7Q9P0N9 293 aa19.42■□□□□ 0.7
SMG1-203ENST00000532700 ARIH1Q9Y4X5 557 aaPredicted RBP19.42■□□□□ 0.7
SMG1-203ENST00000532700 A0A0B4J269 797 aa19.41■□□□□ 0.7
SMG1-203ENST00000532700 WDR27A2RRH5 827 aa19.41■□□□□ 0.7
SMG1-203ENST00000532700 TBCAO75347 108 aaKnown RBP19.41■□□□□ 0.7
SMG1-203ENST00000532700 PPP1R37O75864 691 aa19.41■□□□□ 0.7
SMG1-203ENST00000532700 C1RP00736 705 aa19.41■□□□□ 0.7
SMG1-203ENST00000532700 CLTAP09496 248 aa19.41■□□□□ 0.7
SMG1-203ENST00000532700 ROR1Q01973 937 aa19.41■□□□□ 0.7
SMG1-203ENST00000532700 AXDND1Q5T1B0 1012 aaPredicted RBP19.41■□□□□ 0.7
SMG1-203ENST00000532700 STAMQ92783 540 aa19.41■□□□□ 0.7
SMG1-203ENST00000532700 FAM84AQ96KN4 292 aa19.41■□□□□ 0.7
SMG1-203ENST00000532700 PHOX2BQ99453 314 aa19.41■□□□□ 0.7
SMG1-203ENST00000532700 STRA6Q9BX79 667 aa19.41■□□□□ 0.7
SMG1-203ENST00000532700 PIDD1Q9HB75 910 aa19.41■□□□□ 0.7
SMG1-203ENST00000532700 BACE2Q9Y5Z0 518 aa19.41■□□□□ 0.7
SMG1-203ENST00000532700 SCN1AP35498 2009 aa19.41■□□□□ 0.7
SMG1-203ENST00000532700 OGTO15294 1046 aa19.4■□□□□ 0.7
SMG1-203ENST00000532700 SEC24AO95486 1093 aa19.4■□□□□ 0.7
SMG1-203ENST00000532700 ADRB2P07550 413 aa19.4■□□□□ 0.7
SMG1-203ENST00000532700 NFICP08651 508 aa19.4■□□□□ 0.7
SMG1-203ENST00000532700 MRPL58Q14197 206 aaKnown RBP19.4■□□□□ 0.7
SMG1-203ENST00000532700 FOXD4L6Q3SYB3 417 aaPredicted RBP19.4■□□□□ 0.7
SMG1-203ENST00000532700 RRAGBQ5VZM2 374 aa19.4■□□□□ 0.7
SMG1-203ENST00000532700 SCARA3Q6AZY7 606 aa19.4■□□□□ 0.7
SMG1-203ENST00000532700 FOXD4L3Q6VB84 417 aaPredicted RBP19.4■□□□□ 0.7
SMG1-203ENST00000532700 PLCD3Q8N3E9 789 aa19.4■□□□□ 0.7
SMG1-203ENST00000532700 PDILTQ8N807 584 aa19.4■□□□□ 0.7
SMG1-203ENST00000532700 SPRYD3Q8NCJ5 442 aa19.4■□□□□ 0.7
SMG1-203ENST00000532700 LINC00301Q8NCQ3 95 aa19.4■□□□□ 0.7
SMG1-203ENST00000532700 GLIS3Q8NEA6 775 aa19.4■□□□□ 0.7
SMG1-203ENST00000532700 ITFG1Q8TB96 612 aa19.4■□□□□ 0.7
SMG1-203ENST00000532700 ACSF2Q96CM8 615 aaPredicted RBP19.4■□□□□ 0.7
SMG1-203ENST00000532700 KIF12Q96FN5 646 aa19.4■□□□□ 0.7
SMG1-203ENST00000532700 SUSD3Q96L08 255 aa19.4■□□□□ 0.7
SMG1-203ENST00000532700 MFSD14AQ96MC6 490 aa19.4■□□□□ 0.7
SMG1-203ENST00000532700 MSTO1Q9BUK6 570 aa19.4■□□□□ 0.7
SMG1-203ENST00000532700 RPP25Q9BUL9 199 aaKnown RBP19.4■□□□□ 0.7
SMG1-203ENST00000532700 STK17AQ9UEE5 414 aa19.4■□□□□ 0.7
SMG1-203ENST00000532700 CPSF3Q9UKF6 684 aaKnown RBP19.4■□□□□ 0.7
SMG1-203ENST00000532700 TIMM13Q9Y5L4 95 aaPredicted RBP19.4■□□□□ 0.7
SMG1-203ENST00000532700 ZDBF2Q9HCK1 2354 aa19.39■□□□□ 0.69
SMG1-203ENST00000532700 VNN2O95498 520 aa19.39■□□□□ 0.69
SMG1-203ENST00000532700 HSP90AA1P07900 732 aaKnown RBP19.39■□□□□ 0.69
SMG1-203ENST00000532700 ADSSP30520 456 aa19.39■□□□□ 0.69
SMG1-203ENST00000532700 MCM4P33991 863 aa19.39■□□□□ 0.69
SMG1-203ENST00000532700 ACOT2P49753 483 aa19.39■□□□□ 0.69
SMG1-203ENST00000532700 NHLH1Q02575 133 aa19.39■□□□□ 0.69
SMG1-203ENST00000532700 TCF15Q12870 199 aa19.39■□□□□ 0.69
SMG1-203ENST00000532700 PPM1LQ5SGD2 360 aa19.39■□□□□ 0.69
SMG1-203ENST00000532700 JADE1Q6IE81 842 aa19.39■□□□□ 0.69
SMG1-203ENST00000532700 SLC8B1Q6J4K2 584 aa19.39■□□□□ 0.69
SMG1-203ENST00000532700 CRELD2Q6UXH1 353 aaPredicted RBP19.39■□□□□ 0.69
SMG1-203ENST00000532700 ZNF720Q7Z2F6 126 aa19.39■□□□□ 0.69
SMG1-203ENST00000532700 UBALD2Q8IYN6 164 aa19.39■□□□□ 0.69
SMG1-203ENST00000532700 TMEM105Q8N8V8 129 aa19.39■□□□□ 0.69
SMG1-203ENST00000532700 KRI1Q8N9T8 703 aaKnown RBP19.39■□□□□ 0.69
SMG1-203ENST00000532700 CHAMP1Q96JM3 812 aa19.39■□□□□ 0.69
SMG1-203ENST00000532700 EPS15L1Q9UBC2 864 aa19.39■□□□□ 0.69
SMG1-203ENST00000532700 DNMT3BQ9UBC3 853 aaKnown RBP19.39■□□□□ 0.69
SMG1-203ENST00000532700 FBXL5Q9UKA1 691 aa19.39■□□□□ 0.69
SMG1-203ENST00000532700 MORC2Q9Y6X9 1032 aaPredicted RBP19.39■□□□□ 0.69
SMG1-203ENST00000532700 H0YCG3 227 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms