RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 SEPT11Q9NVA2 429 aaKnown RBP13.17□□□□□ -0.3
CHD7-211ENST00000532149 ANKFY1Q9P2R3 1169 aa13.17□□□□□ -0.3
CHD7-211ENST00000532149 HDAC6Q9UBN7 1215 aa13.17□□□□□ -0.3
CHD7-211ENST00000532149 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.17□□□□□ -0.3
CHD7-211ENST00000532149 SALL4Q9UJQ4 1053 aa13.17□□□□□ -0.3
CHD7-211ENST00000532149 AJAP1Q9UKB5 411 aaPredicted RBP13.17□□□□□ -0.3
CHD7-211ENST00000532149 PCDHGA4Q9Y5G9 962 aa13.17□□□□□ -0.3
CHD7-211ENST00000532149 V9GYY5 206 aaPredicted RBP13.17□□□□□ -0.3
CHD7-211ENST00000532149 ZSWIM8A7E2V4 1837 aa13.16□□□□□ -0.3
CHD7-211ENST00000532149 GOLGA6L10A0A0M3HER8 536 aa13.16□□□□□ -0.3
CHD7-211ENST00000532149 CCDC66A2RUB6 948 aa13.16□□□□□ -0.3
CHD7-211ENST00000532149 INO80B-WBP1J3KQ70 363 aa13.16□□□□□ -0.3
CHD7-211ENST00000532149 CYP26A1O43174 497 aa13.16□□□□□ -0.3
CHD7-211ENST00000532149 FAM189A1O60320 539 aa13.16□□□□□ -0.3
CHD7-211ENST00000532149 LRRN2O75325 713 aa13.16□□□□□ -0.3
CHD7-211ENST00000532149 STAU1O95793 577 aaKnown RBP13.16□□□□□ -0.3
CHD7-211ENST00000532149 ITGBL1O95965 494 aaPredicted RBP13.16□□□□□ -0.3
CHD7-211ENST00000532149 ASS1P00966 412 aaKnown RBP13.16□□□□□ -0.3
CHD7-211ENST00000532149 TMEM191BP0C7N4 346 aa13.16□□□□□ -0.3
CHD7-211ENST00000532149 GBP1P32455 592 aa13.16□□□□□ -0.3
CHD7-211ENST00000532149 ACOT2P49753 483 aa13.16□□□□□ -0.3
CHD7-211ENST00000532149 ZNF157P51786 506 aaPredicted RBP13.16□□□□□ -0.3
CHD7-211ENST00000532149 TAP1Q03518 808 aa13.16□□□□□ -0.3
CHD7-211ENST00000532149 MBTD1Q05BQ5 628 aa13.16□□□□□ -0.3
CHD7-211ENST00000532149 PPFIA1Q13136 1202 aa13.16□□□□□ -0.3
CHD7-211ENST00000532149 NNTQ13423 1086 aa13.16□□□□□ -0.3
CHD7-211ENST00000532149 NAA30Q147X3 362 aaPredicted RBP13.16□□□□□ -0.3
CHD7-211ENST00000532149 TDRD10Q5VZ19 366 aaKnown RBP13.16□□□□□ -0.3
CHD7-211ENST00000532149 RGMBQ6NW40 437 aa13.16□□□□□ -0.3
CHD7-211ENST00000532149 MTHFD1LQ6UB35 978 aa13.16□□□□□ -0.3
CHD7-211ENST00000532149 FAM43BQ6ZT52 329 aaPredicted RBP13.16□□□□□ -0.3
CHD7-211ENST00000532149 NT5DC3Q86UY8 548 aa13.16□□□□□ -0.3
CHD7-211ENST00000532149 CCDC26Q8TAB7 109 aa13.16□□□□□ -0.3
CHD7-211ENST00000532149 AFG1LQ8WV93 481 aa13.16□□□□□ -0.3
CHD7-211ENST00000532149 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.16□□□□□ -0.39e-6■□□□□ 9.3
CHD7-211ENST00000532149 C16orf70Q9BSU1 422 aa13.16□□□□□ -0.3
CHD7-211ENST00000532149 MIS12Q9H081 205 aa13.16□□□□□ -0.3
CHD7-211ENST00000532149 SLITRK6Q9H5Y7 841 aa13.16□□□□□ -0.3
CHD7-211ENST00000532149 VRTNQ9H8Y1 702 aa13.16□□□□□ -0.3
CHD7-211ENST00000532149 CYP3A43Q9HB55 503 aa13.16□□□□□ -0.3
CHD7-211ENST00000532149 PDE11AQ9HCR9 933 aa13.16□□□□□ -0.3
CHD7-211ENST00000532149 FAM53CQ9NYF3 392 aa13.16□□□□□ -0.3
CHD7-211ENST00000532149 KIAA1257Q9ULG3 409 aa13.16□□□□□ -0.3
CHD7-211ENST00000532149 STXBP5LQ9Y2K9 1186 aa13.16□□□□□ -0.3
CHD7-211ENST00000532149 CEP83Q9Y592 693 aa13.16□□□□□ -0.3
CHD7-211ENST00000532149 SCINQ9Y6U3 715 aa13.16□□□□□ -0.3
CHD7-211ENST00000532149 MCM3APO60318 1980 aa13.16□□□□□ -0.3
CHD7-211ENST00000532149 SMIM35A0A1B0GVV1 85 aa13.15□□□□□ -0.3
CHD7-211ENST00000532149 MED7O43513 233 aa13.15□□□□□ -0.3
CHD7-211ENST00000532149 SORBS3O60504 671 aa13.15□□□□□ -0.3
CHD7-211ENST00000532149 MMP3P08254 477 aa13.15□□□□□ -0.3
CHD7-211ENST00000532149 KRT5P13647 590 aa13.15□□□□□ -0.3
CHD7-211ENST00000532149 ZSCAN20P17040 1043 aaPredicted RBP13.15□□□□□ -0.3
CHD7-211ENST00000532149 MARK3P27448 753 aa13.15□□□□□ -0.3
CHD7-211ENST00000532149 NOP14P78316 857 aaKnown RBP13.15□□□□□ -0.3
CHD7-211ENST00000532149 TAF1CQ15572 869 aaPredicted RBP13.15□□□□□ -0.3
CHD7-211ENST00000532149 CLEC16AQ2KHT3 1053 aa13.15□□□□□ -0.3
CHD7-211ENST00000532149 ZNF568Q3ZCX4 644 aa13.15□□□□□ -0.3
CHD7-211ENST00000532149 GLIPR1L2Q4G1C9 344 aa13.15□□□□□ -0.3
CHD7-211ENST00000532149 EMBQ6PCB8 327 aa13.15□□□□□ -0.3
CHD7-211ENST00000532149 EFCAB13Q8IY85 973 aa13.15□□□□□ -0.3
CHD7-211ENST00000532149 USP38Q8NB14 1042 aa13.15□□□□□ -0.3
CHD7-211ENST00000532149 ZNF516Q92618 1163 aa13.15□□□□□ -0.3
CHD7-211ENST00000532149 CAPZA3Q96KX2 299 aa13.15□□□□□ -0.3
CHD7-211ENST00000532149 POP1Q99575 1024 aaKnown RBP13.15□□□□□ -0.3
CHD7-211ENST00000532149 PACSIN1Q9BY11 444 aa13.15□□□□□ -0.3
CHD7-211ENST00000532149 GCOM2Q9BZD3 368 aaPredicted RBP13.15□□□□□ -0.3
CHD7-211ENST00000532149 FAM129AQ9BZQ8 928 aa13.15□□□□□ -0.3
CHD7-211ENST00000532149 NIF3L1Q9GZT8 377 aa13.15□□□□□ -0.3
CHD7-211ENST00000532149 AP5M1Q9H0R1 490 aa13.15□□□□□ -0.3
CHD7-211ENST00000532149 RNPEPQ9H4A4 650 aa13.15□□□□□ -0.3
CHD7-211ENST00000532149 PDGFCQ9NRA1 345 aa13.15□□□□□ -0.3
CHD7-211ENST00000532149 CTTNBP2NLQ9P2B4 639 aa13.15□□□□□ -0.3
CHD7-211ENST00000532149 TMEM59LQ9UK28 342 aa13.15□□□□□ -0.3
CHD7-211ENST00000532149 TFR2Q9UP52 801 aa13.15□□□□□ -0.3
CHD7-211ENST00000532149 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.15□□□□□ -0.3
CHD7-211ENST00000532149 C2CD2Q9Y426 696 aa13.15□□□□□ -0.3
CHD7-211ENST00000532149 TELO2Q9Y4R8 837 aa13.15□□□□□ -0.3
CHD7-211ENST00000532149 KAT6AQ92794 2004 aa13.15□□□□□ -0.3
CHD7-211ENST00000532149 TMCO5BA8MYB1 307 aa13.14□□□□□ -0.31
CHD7-211ENST00000532149 ABLIM1O14639 778 aa13.14□□□□□ -0.31
CHD7-211ENST00000532149 KCNK3O14649 394 aa13.14□□□□□ -0.31
CHD7-211ENST00000532149 PEX10O60683 326 aa13.14□□□□□ -0.31
CHD7-211ENST00000532149 ERLIN2O94905 339 aa13.14□□□□□ -0.31
CHD7-211ENST00000532149 SGPL1O95470 568 aa13.14□□□□□ -0.31
CHD7-211ENST00000532149 ADCYAP1R1P41586 468 aa13.14□□□□□ -0.31
CHD7-211ENST00000532149 NSFP46459 744 aaKnown RBP13.14□□□□□ -0.31
CHD7-211ENST00000532149 FMO1Q01740 532 aa13.14□□□□□ -0.31
CHD7-211ENST00000532149 CENPCQ03188 943 aa13.14□□□□□ -0.31
CHD7-211ENST00000532149 GRIK4Q16099 956 aa13.14□□□□□ -0.31
CHD7-211ENST00000532149 LONRF2Q1L5Z9 754 aa13.14□□□□□ -0.31
CHD7-211ENST00000532149 BEND6Q5SZJ8 279 aaPredicted RBP13.14□□□□□ -0.31
CHD7-211ENST00000532149 C8orf74Q6P047 294 aa13.14□□□□□ -0.31
CHD7-211ENST00000532149 NFRKBQ6P4R8 1299 aa13.14□□□□□ -0.31
CHD7-211ENST00000532149 C17orf99Q6UX52 265 aa13.14□□□□□ -0.31
CHD7-211ENST00000532149 NOP9Q86U38 636 aaKnown RBP13.14□□□□□ -0.31
CHD7-211ENST00000532149 RASAL3Q86YV0 1011 aa13.14□□□□□ -0.31
CHD7-211ENST00000532149 GOLGA6L1Q8N7Z2 621 aa13.14□□□□□ -0.31
CHD7-211ENST00000532149 DDX1Q92499 740 aaKnown RBP13.14□□□□□ -0.31
CHD7-211ENST00000532149 USP6NLQ92738 828 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms