RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 MLLT1Q03111 559 aaPredicted RBP13.57□□□□□ -0.24
COPB1-208ENST00000532088 PPP2R3AQ06190 1150 aa13.57□□□□□ -0.24
COPB1-208ENST00000532088 BFSP1Q12934 665 aa13.57□□□□□ -0.24
COPB1-208ENST00000532088 SLC10A6Q3KNW5 377 aa13.57□□□□□ -0.24
COPB1-208ENST00000532088 ZBTB41Q5SVQ8 909 aa13.57□□□□□ -0.24
COPB1-208ENST00000532088 CDKAL1Q5VV42 579 aa13.57□□□□□ -0.24
COPB1-208ENST00000532088 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.57□□□□□ -0.24
COPB1-208ENST00000532088 OTOP2Q7RTS6 562 aa13.57□□□□□ -0.24
COPB1-208ENST00000532088 CBWD2Q8IUF1 395 aa13.57□□□□□ -0.24
COPB1-208ENST00000532088 AOPEPQ8N6M6 819 aa13.57□□□□□ -0.24
COPB1-208ENST00000532088 KANSL3Q9P2N6 904 aa13.57□□□□□ -0.24
COPB1-208ENST00000532088 LRFN2Q9ULH4 789 aa13.57□□□□□ -0.24
COPB1-208ENST00000532088 C2CD2Q9Y426 696 aa13.57□□□□□ -0.24
COPB1-208ENST00000532088 HES2Q9Y543 173 aa13.57□□□□□ -0.24
COPB1-208ENST00000532088 COL4A6Q14031 1691 aa13.56□□□□□ -0.24
COPB1-208ENST00000532088 CARNS1A5YM72 827 aa13.56□□□□□ -0.24
COPB1-208ENST00000532088 GOLGA8IPA6NC78 632 aa13.56□□□□□ -0.24
COPB1-208ENST00000532088 GOLGA8JA6NMD2 632 aa13.56□□□□□ -0.24
COPB1-208ENST00000532088 H0YGN5 161 aa13.56□□□□□ -0.24
COPB1-208ENST00000532088 OFD1O75665 1012 aa13.56□□□□□ -0.24
COPB1-208ENST00000532088 CXCL8P10145 99 aa13.56□□□□□ -0.24
COPB1-208ENST00000532088 KRT13P13646 458 aa13.56□□□□□ -0.24
COPB1-208ENST00000532088 ZNF18P17022 549 aa13.56□□□□□ -0.24
COPB1-208ENST00000532088 GTF2H1P32780 548 aa13.56□□□□□ -0.24
COPB1-208ENST00000532088 MMP16P51512 607 aa13.56□□□□□ -0.24
COPB1-208ENST00000532088 TMEM259Q4ZIN3 620 aa13.56□□□□□ -0.24
COPB1-208ENST00000532088 GLB1LQ6UWU2 654 aa13.56□□□□□ -0.24
COPB1-208ENST00000532088 IRF2BP1Q8IU81 584 aa13.56□□□□□ -0.24
COPB1-208ENST00000532088 TMEM192Q8IY95 271 aa13.56□□□□□ -0.24
COPB1-208ENST00000532088 PARD3BQ8TEW8 1205 aa13.56□□□□□ -0.24
COPB1-208ENST00000532088 MRPL9Q9BYD2 267 aaKnown RBP13.56□□□□□ -0.24
COPB1-208ENST00000532088 SLC6A16Q9GZN6 736 aa13.56□□□□□ -0.24
COPB1-208ENST00000532088 TMEM117Q9H0C3 514 aa13.56□□□□□ -0.24
COPB1-208ENST00000532088 RNF19AQ9NV58 838 aa13.56□□□□□ -0.24
COPB1-208ENST00000532088 PLA2G2EQ9NZK7 142 aa13.56□□□□□ -0.24
COPB1-208ENST00000532088 MAGEC2Q9UBF1 373 aaPredicted RBP13.56□□□□□ -0.24
COPB1-208ENST00000532088 PARP2Q9UGN5 583 aa13.56□□□□□ -0.24
COPB1-208ENST00000532088 ARMCX3Q9UH62 379 aaPredicted RBP13.56□□□□□ -0.24
COPB1-208ENST00000532088 GOLGA6L19H0YKK7 550 aa13.55□□□□□ -0.24
COPB1-208ENST00000532088 PMM2O15305 246 aa13.55□□□□□ -0.24
COPB1-208ENST00000532088 XPOTO43592 962 aaKnown RBP13.55□□□□□ -0.24
COPB1-208ENST00000532088 STX10O60499 249 aa13.55□□□□□ -0.24
COPB1-208ENST00000532088 DGKIO75912 1065 aa13.55□□□□□ -0.24
COPB1-208ENST00000532088 CYP3A5P20815 502 aa13.55□□□□□ -0.24
COPB1-208ENST00000532088 AKAP5P24588 427 aa13.55□□□□□ -0.24
COPB1-208ENST00000532088 VAMP7P51809 220 aa13.55□□□□□ -0.24
COPB1-208ENST00000532088 OSTNP61366 133 aa13.55□□□□□ -0.24
COPB1-208ENST00000532088 CCDC40Q4G0X9 1142 aa13.55□□□□□ -0.24
COPB1-208ENST00000532088 SEZ6Q53EL9 994 aa13.55□□□□□ -0.24
COPB1-208ENST00000532088 WDR49Q8IV35 697 aa13.55□□□□□ -0.24
COPB1-208ENST00000532088 TRIM59Q8IWR1 403 aa13.55□□□□□ -0.24
COPB1-208ENST00000532088 ABI1Q8IZP0 508 aa13.55□□□□□ -0.24
COPB1-208ENST00000532088 ZSWIM2Q8NEG5 633 aa13.55□□□□□ -0.24
COPB1-208ENST00000532088 ANKRD20A12PQ8NF67 263 aa13.55□□□□□ -0.24
COPB1-208ENST00000532088 URGCPQ8TCY9 931 aa13.55□□□□□ -0.24
COPB1-208ENST00000532088 ZNF689Q96CS4 500 aaPredicted RBP13.55□□□□□ -0.24
COPB1-208ENST00000532088 CNOT6LQ96LI5 555 aaKnown RBP13.55□□□□□ -0.24
COPB1-208ENST00000532088 FNBP1Q96RU3 617 aa13.55□□□□□ -0.24
COPB1-208ENST00000532088 RPS6KC1Q96S38 1066 aa13.55□□□□□ -0.24
COPB1-208ENST00000532088 CGRRF1Q99675 332 aa13.55□□□□□ -0.24
COPB1-208ENST00000532088 HSD3B7Q9H2F3 369 aa13.55□□□□□ -0.24
COPB1-208ENST00000532088 RC3H2Q9HBD1 1191 aaKnown RBP13.55□□□□□ -0.24
COPB1-208ENST00000532088 SAMSN1Q9NSI8 373 aaKnown RBP13.55□□□□□ -0.24
COPB1-208ENST00000532088 SLC38A7Q9NVC3 462 aa13.55□□□□□ -0.24
COPB1-208ENST00000532088 FANCLQ9NW38 375 aa13.55□□□□□ -0.24
COPB1-208ENST00000532088 SLC4A7Q9Y6M7 1214 aa13.55□□□□□ -0.24
COPB1-208ENST00000532088 CITO14578 2027 aa13.54□□□□□ -0.24
COPB1-208ENST00000532088 SMIM28A0A1B0GU29 152 aa13.54□□□□□ -0.24
COPB1-208ENST00000532088 ARL5CA6NH57 179 aa13.54□□□□□ -0.24
COPB1-208ENST00000532088 LRRC10BA6NIK2 292 aa13.54□□□□□ -0.24
COPB1-208ENST00000532088 ZBBXA8MT70 800 aa13.54□□□□□ -0.24
COPB1-208ENST00000532088 LACTBL1A8MY62 500 aa13.54□□□□□ -0.24
COPB1-208ENST00000532088 KCNJ18B7U540 433 aa13.54□□□□□ -0.24
COPB1-208ENST00000532088 MEFVO15553 781 aaPredicted RBP13.54□□□□□ -0.24
COPB1-208ENST00000532088 DXOO77932 396 aaKnown RBP13.54□□□□□ -0.24
COPB1-208ENST00000532088 GJB5O95377 273 aa13.54□□□□□ -0.24
COPB1-208ENST00000532088 JUNDP17535 347 aa13.54□□□□□ -0.24
COPB1-208ENST00000532088 MLH1P40692 756 aa13.54□□□□□ -0.24
COPB1-208ENST00000532088 DEFB103AP81534 67 aa13.54□□□□□ -0.24
COPB1-208ENST00000532088 HTRA4P83105 476 aaPredicted RBP13.54□□□□□ -0.24
COPB1-208ENST00000532088 GRIK3Q13003 919 aa13.54□□□□□ -0.24
COPB1-208ENST00000532088 KCNJ12Q14500 433 aa13.54□□□□□ -0.24
COPB1-208ENST00000532088 ZBTB6Q15916 424 aa13.54□□□□□ -0.24
COPB1-208ENST00000532088 TCP11X2Q5H9J9 407 aa13.54□□□□□ -0.24
COPB1-208ENST00000532088 NOMO2Q5JPE7 1267 aa13.54□□□□□ -0.24
COPB1-208ENST00000532088 CLLU1OSQ5K130 101 aa13.54□□□□□ -0.24
COPB1-208ENST00000532088 CMTR2Q8IYT2 770 aaKnown RBP13.54□□□□□ -0.24
COPB1-208ENST00000532088 GSTCDQ8NEC7 633 aa13.54□□□□□ -0.24
COPB1-208ENST00000532088 CACTINQ8WUQ7 758 aaKnown RBP13.54□□□□□ -0.24
COPB1-208ENST00000532088 LPPQ93052 612 aa13.54□□□□□ -0.24
COPB1-208ENST00000532088 CASD1Q96PB1 797 aa13.54□□□□□ -0.24
COPB1-208ENST00000532088 PPP1R10Q96QC0 940 aaKnown RBP13.54□□□□□ -0.24
COPB1-208ENST00000532088 GAD1Q99259 594 aa13.54□□□□□ -0.24
COPB1-208ENST00000532088 APOL6Q9BWW8 343 aa13.54□□□□□ -0.24
COPB1-208ENST00000532088 UBE2OQ9C0C9 1292 aaKnown RBP13.54□□□□□ -0.24
COPB1-208ENST00000532088 PRDM9Q9NQV7 894 aa13.54□□□□□ -0.24
COPB1-208ENST00000532088 LIMA1Q9UHB6 759 aaKnown RBP13.54□□□□□ -0.24
COPB1-208ENST00000532088 UBQLN1Q9UMX0 589 aaKnown RBP13.54□□□□□ -0.24
COPB1-208ENST00000532088 MEIS3P2A8K0S8 358 aa13.53□□□□□ -0.24
COPB1-208ENST00000532088 PTGESO14684 152 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms