RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 C18orf25Q96B23 403 aaPredicted RBP20.2■□□□□ 0.82
SSSCA1-206ENST00000531405 MRPL4Q9BYD3 311 aaKnown RBP20.2■□□□□ 0.82
SSSCA1-206ENST00000531405 PLA2G2FQ9BZM2 168 aa20.2■□□□□ 0.82
SSSCA1-206ENST00000531405 MEFVO15553 781 aaPredicted RBP20.19■□□□□ 0.82
SSSCA1-206ENST00000531405 HARSP12081 509 aaKnown RBP20.19■□□□□ 0.82
SSSCA1-206ENST00000531405 HMGN5P82970 282 aaKnown RBP20.19■□□□□ 0.82
SSSCA1-206ENST00000531405 PRKCQQ04759 706 aa20.19■□□□□ 0.82
SSSCA1-206ENST00000531405 MAPK7Q13164 816 aa20.19■□□□□ 0.82
SSSCA1-206ENST00000531405 DMP1Q13316 513 aaPredicted RBP20.19■□□□□ 0.82
SSSCA1-206ENST00000531405 IL17AQ16552 155 aa20.19■□□□□ 0.82
SSSCA1-206ENST00000531405 ZC3H14Q6PJT7 736 aaKnown RBP20.19■□□□□ 0.82
SSSCA1-206ENST00000531405 KCNK18Q7Z418 384 aa20.19■□□□□ 0.82
SSSCA1-206ENST00000531405 KIAA2013Q8IYS2 634 aa20.19■□□□□ 0.82
SSSCA1-206ENST00000531405 TMEM134Q9H6X4 195 aa20.19■□□□□ 0.82
SSSCA1-206ENST00000531405 KMT5AQ9NQR1 393 aa20.19■□□□□ 0.82
SSSCA1-206ENST00000531405 SPATA6Q9NWH7 488 aaPredicted RBP20.19■□□□□ 0.82
SSSCA1-206ENST00000531405 ARHGAP28Q9P2N2 729 aa20.19■□□□□ 0.82
SSSCA1-206ENST00000531405 DNM3Q9UQ16 869 aa20.19■□□□□ 0.82
SSSCA1-206ENST00000531405 F5P12259 2224 aa20.19■□□□□ 0.82
SSSCA1-206ENST00000531405 FAM170BA6NMN3 283 aa20.18■□□□□ 0.82
SSSCA1-206ENST00000531405 SFI1A8K8P3 1242 aa20.18■□□□□ 0.82
SSSCA1-206ENST00000531405 ABLIM1O14639 778 aa20.18■□□□□ 0.82
SSSCA1-206ENST00000531405 PRRG1O14668 218 aa20.18■□□□□ 0.82
SSSCA1-206ENST00000531405 SLC16A4O15374 487 aa20.18■□□□□ 0.82
SSSCA1-206ENST00000531405 LRG1P02750 347 aa20.18■□□□□ 0.82
SSSCA1-206ENST00000531405 U2AF2P26368 475 aaKnown RBP eCLIP20.18■□□□□ 0.82
SSSCA1-206ENST00000531405 SLC8B1Q6J4K2 584 aa20.18■□□□□ 0.82
SSSCA1-206ENST00000531405 RINT1Q6NUQ1 792 aa20.18■□□□□ 0.82
SSSCA1-206ENST00000531405 RTL10Q7L3V2 364 aa20.18■□□□□ 0.82
SSSCA1-206ENST00000531405 TMEM130Q8N3G9 435 aa20.18■□□□□ 0.82
SSSCA1-206ENST00000531405 ZNF461Q8TAF7 563 aa20.18■□□□□ 0.82
SSSCA1-206ENST00000531405 ZBTB45Q96K62 511 aaPredicted RBP20.18■□□□□ 0.82
SSSCA1-206ENST00000531405 ACAP3Q96P50 834 aa20.18■□□□□ 0.82
SSSCA1-206ENST00000531405 HINFPQ9BQA5 517 aa20.18■□□□□ 0.82
SSSCA1-206ENST00000531405 TCHPQ9BT92 498 aa20.18■□□□□ 0.82
SSSCA1-206ENST00000531405 BCO2Q9BYV7 579 aa20.18■□□□□ 0.82
SSSCA1-206ENST00000531405 RAB34Q9BZG1 259 aa20.18■□□□□ 0.82
SSSCA1-206ENST00000531405 LTB4R2Q9NPC1 389 aa20.18■□□□□ 0.82
SSSCA1-206ENST00000531405 SLC38A7Q9NVC3 462 aa20.18■□□□□ 0.82
SSSCA1-206ENST00000531405 ARHGEF37A1IGU5 675 aa20.17■□□□□ 0.82
SSSCA1-206ENST00000531405 ABLIM3O94929 683 aa20.17■□□□□ 0.82
SSSCA1-206ENST00000531405 SEC24AO95486 1093 aa20.17■□□□□ 0.82
SSSCA1-206ENST00000531405 MCF2P10911 925 aa20.17■□□□□ 0.82
SSSCA1-206ENST00000531405 PTPN2P17706 415 aa20.17■□□□□ 0.82
SSSCA1-206ENST00000531405 PROZP22891 400 aa20.17■□□□□ 0.82
SSSCA1-206ENST00000531405 ELF1P32519 619 aa20.17■□□□□ 0.82
SSSCA1-206ENST00000531405 PFKPQ01813 784 aa20.17■□□□□ 0.82
SSSCA1-206ENST00000531405 RAD51AP2Q09MP3 1159 aa20.17■□□□□ 0.82
SSSCA1-206ENST00000531405 SEZ6Q53EL9 994 aa20.17■□□□□ 0.82
SSSCA1-206ENST00000531405 KRT79Q5XKE5 535 aa20.17■□□□□ 0.82
SSSCA1-206ENST00000531405 TANGO2Q6ICL3 276 aa20.17■□□□□ 0.82
SSSCA1-206ENST00000531405 MPZL3Q6UWV2 235 aa20.17■□□□□ 0.82
SSSCA1-206ENST00000531405 TPRG1Q6ZUI0 275 aa20.17■□□□□ 0.82
SSSCA1-206ENST00000531405 C1orf186Q6ZWK4 172 aa20.17■□□□□ 0.82
SSSCA1-206ENST00000531405 ERMP1Q7Z2K6 904 aa20.17■□□□□ 0.82
SSSCA1-206ENST00000531405 DCLK2Q8N568 766 aa20.17■□□□□ 0.82
SSSCA1-206ENST00000531405 TCEAL4Q96EI5 215 aa20.17■□□□□ 0.82
SSSCA1-206ENST00000531405 DRC1Q96MC2 740 aa20.17■□□□□ 0.82
SSSCA1-206ENST00000531405 CORO1BQ9BR76 489 aa20.17■□□□□ 0.82
SSSCA1-206ENST00000531405 MMTAG2Q9BU76 263 aaKnown RBP20.17■□□□□ 0.82
SSSCA1-206ENST00000531405 CYP4F11Q9HBI6 524 aa20.17■□□□□ 0.82
SSSCA1-206ENST00000531405 NUB1Q9Y5A7 615 aa20.17■□□□□ 0.82
SSSCA1-206ENST00000531405 NRG2O14511 850 aaPredicted RBP20.16■□□□□ 0.82
SSSCA1-206ENST00000531405 TBC1D4O60343 1298 aa20.16■□□□□ 0.82
SSSCA1-206ENST00000531405 ECI2O75521 394 aa20.16■□□□□ 0.82
SSSCA1-206ENST00000531405 KCNE1P15382 129 aa20.16■□□□□ 0.82
SSSCA1-206ENST00000531405 ZRSR1Q15695 479 aaKnown RBP20.16■□□□□ 0.82
SSSCA1-206ENST00000531405 PRSS36Q5K4E3 855 aa20.16■□□□□ 0.82
SSSCA1-206ENST00000531405 RMDN1Q96DB5 314 aa20.16■□□□□ 0.82
SSSCA1-206ENST00000531405 ZSCAN31Q96LW9 406 aaPredicted RBP20.16■□□□□ 0.82
SSSCA1-206ENST00000531405 HEBP1Q9NRV9 189 aa20.16■□□□□ 0.82
SSSCA1-206ENST00000531405 GDE1Q9NZC3 331 aa20.16■□□□□ 0.82
SSSCA1-206ENST00000531405 CNTN3Q9P232 1028 aa20.16■□□□□ 0.82
SSSCA1-206ENST00000531405 ANKFY1Q9P2R3 1169 aa20.16■□□□□ 0.82
SSSCA1-206ENST00000531405 DAXXQ9UER7 740 aaPredicted RBP20.16■□□□□ 0.82
SSSCA1-206ENST00000531405 FBXL5Q9UKA1 691 aa20.16■□□□□ 0.82
SSSCA1-206ENST00000531405 STK24Q9Y6E0 443 aa20.16■□□□□ 0.82
SSSCA1-206ENST00000531405 SYN3O14994 580 aa20.15■□□□□ 0.82
SSSCA1-206ENST00000531405 LAMTOR5O43504 91 aa20.15■□□□□ 0.82
SSSCA1-206ENST00000531405 EIF5BO60841 1220 aaKnown RBP20.15■□□□□ 0.82
SSSCA1-206ENST00000531405 ATF2P15336 505 aa20.15■□□□□ 0.82
SSSCA1-206ENST00000531405 TARSP26639 723 aaKnown RBP20.15■□□□□ 0.82
SSSCA1-206ENST00000531405 CCR2P41597 374 aa20.15■□□□□ 0.82
SSSCA1-206ENST00000531405 MRPL58Q14197 206 aaKnown RBP20.15■□□□□ 0.82
SSSCA1-206ENST00000531405 TCEAL8Q8IYN2 117 aa20.15■□□□□ 0.82
SSSCA1-206ENST00000531405 KIF2CQ99661 725 aa20.15■□□□□ 0.82
SSSCA1-206ENST00000531405 AVENQ9NQS1 362 aaPredicted RBP20.15■□□□□ 0.82
SSSCA1-206ENST00000531405 SH2B1Q9NRF2 756 aaPredicted RBP20.15■□□□□ 0.82
SSSCA1-206ENST00000531405 RBM19Q9Y4C8 960 aaKnown RBP20.15■□□□□ 0.82
SSSCA1-206ENST00000531405 INSL5Q9Y5Q6 135 aa20.15■□□□□ 0.82
SSSCA1-206ENST00000531405 KIF26AQ9ULI4 1882 aaPredicted RBP20.15■□□□□ 0.82
SSSCA1-206ENST00000531405 TCHHQ07283 1943 aa20.15■□□□□ 0.82
SSSCA1-206ENST00000531405 TSC2P49815 1807 aa20.14■□□□□ 0.81
SSSCA1-206ENST00000531405 H7C4K7 107 aa20.14■□□□□ 0.81
SSSCA1-206ENST00000531405 FCARP24071 287 aa20.14■□□□□ 0.81
SSSCA1-206ENST00000531405 RPL9P32969 192 aaKnown RBP20.14■□□□□ 0.81
SSSCA1-206ENST00000531405 MCM4P33991 863 aa20.14■□□□□ 0.81
SSSCA1-206ENST00000531405 CSTF1Q05048 431 aaKnown RBP20.14■□□□□ 0.81
SSSCA1-206ENST00000531405 GRM2Q14416 872 aa20.14■□□□□ 0.81
SSSCA1-206ENST00000531405 CTXN3Q4LDR2 81 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms