RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 BRCC3P46736 316 aa12.89□□□□□ -0.35
LTBP3-219ENST00000530990 CYP2J2P51589 502 aa12.89□□□□□ -0.35
LTBP3-219ENST00000530990 POU5F1Q01860 360 aaKnown RBP12.89□□□□□ -0.35
LTBP3-219ENST00000530990 TFF2Q03403 129 aa12.89□□□□□ -0.35
LTBP3-219ENST00000530990 BMS1Q14692 1282 aaKnown RBP12.89□□□□□ -0.35
LTBP3-219ENST00000530990 TMEM132DQ14C87 1099 aa12.89□□□□□ -0.35
LTBP3-219ENST00000530990 CTC1Q2NKJ3 1217 aa12.89□□□□□ -0.35
LTBP3-219ENST00000530990 RTP2Q5QGT7 225 aa12.89□□□□□ -0.35
LTBP3-219ENST00000530990 EP400NLQ6ZTU2 488 aa12.89□□□□□ -0.35
LTBP3-219ENST00000530990 CBWD2Q8IUF1 395 aa12.89□□□□□ -0.35
LTBP3-219ENST00000530990 SMYD4Q8IYR2 804 aaPredicted RBP12.89□□□□□ -0.35
LTBP3-219ENST00000530990 EFHBQ8N7U6 833 aa12.89□□□□□ -0.35
LTBP3-219ENST00000530990 VN1R2Q8NFZ6 395 aa12.89□□□□□ -0.35
LTBP3-219ENST00000530990 HLA-CQ95604 372 aa12.89□□□□□ -0.35
LTBP3-219ENST00000530990 DDX27Q96GQ7 796 aaKnown RBP12.89□□□□□ -0.35
LTBP3-219ENST00000530990 KCTD10Q9H3F6 313 aa12.89□□□□□ -0.35
LTBP3-219ENST00000530990 ASB7Q9H672 318 aa12.89□□□□□ -0.35
LTBP3-219ENST00000530990 MRPL17Q9NRX2 175 aaKnown RBP12.89□□□□□ -0.35
LTBP3-219ENST00000530990 COG5Q9UP83 839 aa12.89□□□□□ -0.35
LTBP3-219ENST00000530990 MAPK8IP1Q9UQF2 711 aa12.89□□□□□ -0.35
LTBP3-219ENST00000530990 DERAQ9Y315 318 aa12.89□□□□□ -0.35
LTBP3-219ENST00000530990 PCDHA5Q9Y5H7 936 aa12.89□□□□□ -0.35
LTBP3-219ENST00000530990 MTCL1Q9Y4B5 1905 aaKnown RBP12.88□□□□□ -0.35
LTBP3-219ENST00000530990 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.88□□□□□ -0.35
LTBP3-219ENST00000530990 I3L4J1 428 aa12.88□□□□□ -0.35
LTBP3-219ENST00000530990 TULP1O00294 542 aaPredicted RBP12.88□□□□□ -0.35
LTBP3-219ENST00000530990 PPEF2O14830 753 aa12.88□□□□□ -0.35
LTBP3-219ENST00000530990 XPOTO43592 962 aaKnown RBP12.88□□□□□ -0.35
LTBP3-219ENST00000530990 LILRB3O75022 631 aa12.88□□□□□ -0.35
LTBP3-219ENST00000530990 CLASP2O75122 1294 aaKnown RBP12.88□□□□□ -0.35
LTBP3-219ENST00000530990 IL18RAPO95256 599 aa12.88□□□□□ -0.35
LTBP3-219ENST00000530990 CYP3A5P20815 502 aa12.88□□□□□ -0.35
LTBP3-219ENST00000530990 KCNA5P22460 613 aa12.88□□□□□ -0.35
LTBP3-219ENST00000530990 RPL9P32969 192 aaKnown RBP12.88□□□□□ -0.35
LTBP3-219ENST00000530990 LTBRP36941 435 aa12.88□□□□□ -0.35
LTBP3-219ENST00000530990 SNRPFP62306 86 aaKnown RBP12.88□□□□□ -0.35
LTBP3-219ENST00000530990 DSG1Q02413 1049 aa12.88□□□□□ -0.35
LTBP3-219ENST00000530990 DLX2Q07687 328 aaPredicted RBP12.88□□□□□ -0.35
LTBP3-219ENST00000530990 ELAVL2Q12926 359 aaKnown RBP12.88□□□□□ -0.35
LTBP3-219ENST00000530990 ADAM15Q13444 863 aa12.88□□□□□ -0.35
LTBP3-219ENST00000530990 USP41Q3LFD5 358 aa12.88□□□□□ -0.35
LTBP3-219ENST00000530990 FAM171A1Q5VUB5 890 aa12.88□□□□□ -0.35
LTBP3-219ENST00000530990 KIAA0319Q5VV43 1072 aa12.88□□□□□ -0.35
LTBP3-219ENST00000530990 SPATA1Q5VX52 437 aa12.88□□□□□ -0.35
LTBP3-219ENST00000530990 DCLRE1AQ6PJP8 1040 aa12.88□□□□□ -0.35
LTBP3-219ENST00000530990 C12orf56Q8IXR9 622 aa12.88□□□□□ -0.35
LTBP3-219ENST00000530990 ELOA2Q8IYF1 753 aaPredicted RBP12.88□□□□□ -0.35
LTBP3-219ENST00000530990 BEST2Q8NFU1 509 aa12.88□□□□□ -0.35
LTBP3-219ENST00000530990 SPATA20Q8TB22 786 aa12.88□□□□□ -0.35
LTBP3-219ENST00000530990 RIN2Q8WYP3 895 aaPredicted RBP12.88□□□□□ -0.35
LTBP3-219ENST00000530990 SMARCE1Q969G3 411 aa12.88□□□□□ -0.35
LTBP3-219ENST00000530990 FAM84AQ96KN4 292 aa12.88□□□□□ -0.35
LTBP3-219ENST00000530990 FBXL18Q96ME1 805 aa12.88□□□□□ -0.35
LTBP3-219ENST00000530990 GSDMAQ96QA5 445 aa12.88□□□□□ -0.35
LTBP3-219ENST00000530990 TSPAN18Q96SJ8 248 aa12.88□□□□□ -0.35
LTBP3-219ENST00000530990 CDCA3Q99618 268 aaPredicted RBP12.88□□□□□ -0.35
LTBP3-219ENST00000530990 PDE11AQ9HCR9 933 aa12.88□□□□□ -0.35
LTBP3-219ENST00000530990 CHST7Q9NS84 486 aa12.88□□□□□ -0.35
LTBP3-219ENST00000530990 RMND1Q9NWS8 449 aa12.88□□□□□ -0.35
LTBP3-219ENST00000530990 CGNQ9P2M7 1197 aaKnown RBP12.88□□□□□ -0.35
LTBP3-219ENST00000530990 HOOK1Q9UJC3 728 aaKnown RBP12.88□□□□□ -0.35
LTBP3-219ENST00000530990 BARX2Q9UMQ3 279 aaPredicted RBP12.88□□□□□ -0.35
LTBP3-219ENST00000530990 C2CD2Q9Y426 696 aa12.88□□□□□ -0.35
LTBP3-219ENST00000530990 TCF20Q9UGU0 1960 aaKnown RBP12.88□□□□□ -0.35
LTBP3-219ENST00000530990 SPTBN5Q9NRC6 3674 aaKnown RBP12.88□□□□□ -0.35
LTBP3-219ENST00000530990 H3BQ06 376 aaPredicted RBP12.87□□□□□ -0.35
LTBP3-219ENST00000530990 NCK2O43639 380 aa12.87□□□□□ -0.35
LTBP3-219ENST00000530990 SMC2O95347 1197 aa12.87□□□□□ -0.35
LTBP3-219ENST00000530990 CNPP09543 421 aaKnown RBP12.87□□□□□ -0.35
LTBP3-219ENST00000530990 TKTP29401 623 aaKnown RBP12.87□□□□□ -0.35
LTBP3-219ENST00000530990 MCM4P33991 863 aa12.87□□□□□ -0.35
LTBP3-219ENST00000530990 NDUFV1P49821 464 aa12.87□□□□□ -0.35
LTBP3-219ENST00000530990 KCNC3Q14003 757 aa12.87□□□□□ -0.35
LTBP3-219ENST00000530990 SNRNP35Q16560 246 aaKnown RBP12.87□□□□□ -0.35
LTBP3-219ENST00000530990 KIAA1841Q6NSI8 718 aa12.87□□□□□ -0.35
LTBP3-219ENST00000530990 LLGL2Q6P1M3 1020 aa12.87□□□□□ -0.35
LTBP3-219ENST00000530990 PRSS55Q6UWB4 352 aaPredicted RBP12.87□□□□□ -0.35
LTBP3-219ENST00000530990 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.87□□□□□ -0.35
LTBP3-219ENST00000530990 CEP57Q86XR8 500 aa12.87□□□□□ -0.35
LTBP3-219ENST00000530990 GUF1Q8N442 669 aaKnown RBP12.87□□□□□ -0.35
LTBP3-219ENST00000530990 XXYLT1Q8NBI6 393 aa12.87□□□□□ -0.35
LTBP3-219ENST00000530990 RDH13Q8NBN7 331 aa12.87□□□□□ -0.35
LTBP3-219ENST00000530990 GOLGA5Q8TBA6 731 aa12.87□□□□□ -0.35
LTBP3-219ENST00000530990 GBP4Q96PP9 640 aa12.87□□□□□ -0.35
LTBP3-219ENST00000530990 KLHL5Q96PQ7 755 aa12.87□□□□□ -0.35
LTBP3-219ENST00000530990 NUB1Q9Y5A7 615 aa12.87□□□□□ -0.35
LTBP3-219ENST00000530990 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.87□□□□□ -0.35
LTBP3-219ENST00000530990 HCFC2Q9Y5Z7 792 aa12.87□□□□□ -0.35
LTBP3-219ENST00000530990 C2orf16Q68DN1 1984 aa12.87□□□□□ -0.35
LTBP3-219ENST00000530990 PTPRJQ12913 1337 aa12.87□□□□□ -0.35
LTBP3-219ENST00000530990 FSD2A1L4K1 749 aa12.86□□□□□ -0.35
LTBP3-219ENST00000530990 ZNF233A6NK53 670 aa12.86□□□□□ -0.35
LTBP3-219ENST00000530990 PDXKO00764 312 aa12.86□□□□□ -0.35
LTBP3-219ENST00000530990 TEX28O15482 410 aa12.86□□□□□ -0.35
LTBP3-219ENST00000530990 KIF20AO95235 890 aa12.86□□□□□ -0.35
LTBP3-219ENST00000530990 NR3C1P04150 777 aa12.86□□□□□ -0.35
LTBP3-219ENST00000530990 RPL17P18621 184 aaKnown RBP12.86□□□□□ -0.35
LTBP3-219ENST00000530990 FGFR3P22607 806 aa12.86□□□□□ -0.35
LTBP3-219ENST00000530990 KCNQ1P51787 676 aa12.86□□□□□ -0.35
LTBP3-219ENST00000530990 TFAMQ00059 246 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms