RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 TULP1O00294 542 aaPredicted RBP20.37■□□□□ 0.85
GMDS-208ENST00000530927 NFICP08651 508 aa20.37■□□□□ 0.85
GMDS-208ENST00000530927 WEE2P0C1S8 567 aa20.37■□□□□ 0.85
GMDS-208ENST00000530927 KLRC2P26717 231 aa20.37■□□□□ 0.85
GMDS-208ENST00000530927 ABCD1P33897 745 aa20.37■□□□□ 0.85
GMDS-208ENST00000530927 CLCN4P51793 760 aa20.37■□□□□ 0.85
GMDS-208ENST00000530927 USP41Q3LFD5 358 aa20.37■□□□□ 0.85
GMDS-208ENST00000530927 DCLRE1AQ6PJP8 1040 aa20.37■□□□□ 0.85
GMDS-208ENST00000530927 EPM2AIP1Q7L775 607 aaPredicted RBP20.37■□□□□ 0.85
GMDS-208ENST00000530927 NELFCDQ8IXH7 590 aa20.37■□□□□ 0.85
GMDS-208ENST00000530927 NOC3LQ8WTT2 800 aaKnown RBP20.37■□□□□ 0.85
GMDS-208ENST00000530927 FAM213AQ9BRX8 229 aa20.37■□□□□ 0.85
GMDS-208ENST00000530927 SLC38A7Q9NVC3 462 aa20.37■□□□□ 0.85
GMDS-208ENST00000530927 PPEF2O14830 753 aa20.36■□□□□ 0.85
GMDS-208ENST00000530927 ADAM12O43184 909 aa20.36■□□□□ 0.85
GMDS-208ENST00000530927 SPATA31D3P0C874 917 aa20.36■□□□□ 0.85
GMDS-208ENST00000530927 TKTP29401 623 aaKnown RBP20.36■□□□□ 0.85
GMDS-208ENST00000530927 SMAD4Q13485 552 aaKnown RBP20.36■□□□□ 0.85
GMDS-208ENST00000530927 ZBTB6Q15916 424 aa20.36■□□□□ 0.85
GMDS-208ENST00000530927 SLFN12LQ6IEE8 588 aa20.36■□□□□ 0.85
GMDS-208ENST00000530927 SPATA31D4Q6ZUB0 917 aa20.36■□□□□ 0.85
GMDS-208ENST00000530927 SCFD1Q8WVM8 642 aa20.36■□□□□ 0.85
GMDS-208ENST00000530927 UROC1Q96N76 676 aa20.36■□□□□ 0.85
GMDS-208ENST00000530927 EMILIN2Q9BXX0 1053 aa20.36■□□□□ 0.85
GMDS-208ENST00000530927 S1PR5Q9H228 398 aa20.36■□□□□ 0.85
GMDS-208ENST00000530927 PLEKHA5Q9HAU0 1116 aa20.36■□□□□ 0.85
GMDS-208ENST00000530927 EXOC7Q9UPT5 735 aa20.36■□□□□ 0.85
GMDS-208ENST00000530927 USP15Q9Y4E8 981 aaPredicted RBP20.36■□□□□ 0.85
GMDS-208ENST00000530927 TMEM189-UBE2V1I3L0A0 370 aa20.36■□□□□ 0.85
GMDS-208ENST00000530927 ADRB2P07550 413 aa20.36■□□□□ 0.85
GMDS-208ENST00000530927 PALB2Q86YC2 1186 aa20.36■□□□□ 0.85
GMDS-208ENST00000530927 CASP10Q92851 521 aa20.36■□□□□ 0.85
GMDS-208ENST00000530927 PYM1Q9BRP8 204 aaKnown RBP20.36■□□□□ 0.85
GMDS-208ENST00000530927 TTPALQ9BTX7 342 aa20.36■□□□□ 0.85
GMDS-208ENST00000530927 RXFP1Q9HBX9 757 aa20.36■□□□□ 0.85
GMDS-208ENST00000530927 ALCAMQ13740 583 aa20.35■□□□□ 0.85
GMDS-208ENST00000530927 SMAD2Q15796 467 aaKnown RBP20.35■□□□□ 0.85
GMDS-208ENST00000530927 KMT5BQ4FZB7 885 aa20.35■□□□□ 0.85
GMDS-208ENST00000530927 RARS2Q5T160 578 aaKnown RBP20.35■□□□□ 0.85
GMDS-208ENST00000530927 SCARA3Q6AZY7 606 aa20.35■□□□□ 0.85
GMDS-208ENST00000530927 RSPO2Q6UXX9 243 aaPredicted RBP20.35■□□□□ 0.85
GMDS-208ENST00000530927 EFCAB13Q8IY85 973 aa20.35■□□□□ 0.85
GMDS-208ENST00000530927 LNX1Q8TBB1 728 aaPredicted RBP20.35■□□□□ 0.85
GMDS-208ENST00000530927 CHMP5Q9NZZ3 219 aa20.35■□□□□ 0.85
GMDS-208ENST00000530927 STK39Q9UEW8 545 aa20.35■□□□□ 0.85
GMDS-208ENST00000530927 TTC28Q96AY4 2481 aa20.35■□□□□ 0.85
GMDS-208ENST00000530927 TGFB1I1O43294 461 aa20.34■□□□□ 0.85
GMDS-208ENST00000530927 ZNF202O95125 648 aa20.34■□□□□ 0.85
GMDS-208ENST00000530927 FGFR3P22607 806 aa20.34■□□□□ 0.85
GMDS-208ENST00000530927 STK4Q13043 487 aa20.34■□□□□ 0.85
GMDS-208ENST00000530927 PSMD5Q16401 504 aa20.34■□□□□ 0.85
GMDS-208ENST00000530927 KYAT1Q16773 422 aa20.34■□□□□ 0.85
GMDS-208ENST00000530927 ARMCX5Q6P1M9 558 aa20.34■□□□□ 0.85
GMDS-208ENST00000530927 KRBA2Q6ZNG9 492 aa20.34■□□□□ 0.85
GMDS-208ENST00000530927 KIAA0895Q8NCT3 520 aa20.34■□□□□ 0.85
GMDS-208ENST00000530927 ZNF507Q8TCN5 953 aa20.34■□□□□ 0.85
GMDS-208ENST00000530927 DDX27Q96GQ7 796 aaKnown RBP20.34■□□□□ 0.85
GMDS-208ENST00000530927 CLSTN3Q9BQT9 956 aa20.34■□□□□ 0.85
GMDS-208ENST00000530927 TMEM206Q9H813 350 aa20.34■□□□□ 0.85
GMDS-208ENST00000530927 PVALEFA0A1B0GWK0 134 aa20.33■□□□□ 0.84
GMDS-208ENST00000530927 EIF3DO15371 548 aaKnown RBP eCLIP20.33■□□□□ 0.84
GMDS-208ENST00000530927 KHSRPQ92945 711 aaKnown RBP eCLIP20.33■□□□□ 0.846e-7■■□□□ 14.5
GMDS-208ENST00000530927 FBXL18Q96ME1 805 aa20.33■□□□□ 0.84
GMDS-208ENST00000530927 MAN1C1Q9NR34 630 aa20.33■□□□□ 0.84
GMDS-208ENST00000530927 USP25Q9UHP3 1055 aa20.33■□□□□ 0.84
GMDS-208ENST00000530927 UBQLN1Q9UMX0 589 aaKnown RBP20.33■□□□□ 0.84
GMDS-208ENST00000530927 CLIC2O15247 247 aa20.32■□□□□ 0.84
GMDS-208ENST00000530927 ADH1AP07327 375 aa20.32■□□□□ 0.84
GMDS-208ENST00000530927 SRGAP2BP0DMP2 458 aa20.32■□□□□ 0.84
GMDS-208ENST00000530927 GARTP22102 1010 aa20.32■□□□□ 0.84
GMDS-208ENST00000530927 SP100P23497 879 aaPredicted RBP20.32■□□□□ 0.84
GMDS-208ENST00000530927 RPL9P32969 192 aaKnown RBP20.32■□□□□ 0.84
GMDS-208ENST00000530927 MCM4P33991 863 aa20.32■□□□□ 0.84
GMDS-208ENST00000530927 TMEM132DQ14C87 1099 aa20.32■□□□□ 0.84
GMDS-208ENST00000530927 POSTNQ15063 836 aa20.32■□□□□ 0.84
GMDS-208ENST00000530927 PUS10Q3MIT2 529 aaKnown RBP20.32■□□□□ 0.84
GMDS-208ENST00000530927 SPATA1Q5VX52 437 aa20.32■□□□□ 0.84
GMDS-208ENST00000530927 TMC5Q6UXY8 1006 aa20.32■□□□□ 0.84
GMDS-208ENST00000530927 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.32■□□□□ 0.84
GMDS-208ENST00000530927 PIK3R5Q8WYR1 880 aa20.32■□□□□ 0.84
GMDS-208ENST00000530927 SUSD6Q92537 303 aa20.32■□□□□ 0.84
GMDS-208ENST00000530927 EXOC1Q9NV70 894 aa20.32■□□□□ 0.84
GMDS-208ENST00000530927 SSX2IPQ9Y2D8 614 aa20.32■□□□□ 0.84
GMDS-208ENST00000530927 NUB1Q9Y5A7 615 aa20.32■□□□□ 0.84
GMDS-208ENST00000530927 CUL9Q8IWT3 2517 aa20.32■□□□□ 0.84
GMDS-208ENST00000530927 FSD2A1L4K1 749 aa20.31■□□□□ 0.84
GMDS-208ENST00000530927 TGM5O43548 720 aa20.31■□□□□ 0.84
GMDS-208ENST00000530927 GADD45BO75293 160 aaPredicted RBP20.31■□□□□ 0.84
GMDS-208ENST00000530927 RFPL2O75678 378 aa20.31■□□□□ 0.84
GMDS-208ENST00000530927 GLUD1P00367 558 aa20.31■□□□□ 0.84
GMDS-208ENST00000530927 RPN1P04843 607 aaKnown RBP20.31■□□□□ 0.84
GMDS-208ENST00000530927 LRPAP1P30533 357 aa20.31■□□□□ 0.84
GMDS-208ENST00000530927 ZP2Q05996 745 aa20.31■□□□□ 0.84
GMDS-208ENST00000530927 STXBP4Q6ZWJ1 553 aa20.31■□□□□ 0.84
GMDS-208ENST00000530927 PPFIBP1Q86W92 1011 aa20.31■□□□□ 0.84
GMDS-208ENST00000530927 CBWD2Q8IUF1 395 aa20.31■□□□□ 0.84
GMDS-208ENST00000530927 FMR1NBQ8N0W7 255 aaPredicted RBP20.31■□□□□ 0.84
GMDS-208ENST00000530927 ERCC4Q92889 916 aaPredicted RBP20.31■□□□□ 0.84
GMDS-208ENST00000530927 AGPAT3Q9NRZ7 376 aa20.31■□□□□ 0.84
GMDS-208ENST00000530927 RBAKQ9NYW8 714 aaPredicted RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms