RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 SPAG1Q07617 926 aa17.37■□□□□ 0.37
BRK1-201ENST00000530758 ZSCAN23Q3MJ62 389 aa17.37■□□□□ 0.37
BRK1-201ENST00000530758 SPOUT1Q5T280 376 aaKnown RBP17.37■□□□□ 0.37
BRK1-201ENST00000530758 DCLRE1AQ6PJP8 1040 aa17.37■□□□□ 0.37
BRK1-201ENST00000530758 SPRED2Q7Z698 418 aa17.37■□□□□ 0.37
BRK1-201ENST00000530758 FRMD5Q7Z6J6 570 aa17.37■□□□□ 0.37
BRK1-201ENST00000530758 FAM186BQ8IYM0 893 aa17.37■□□□□ 0.37
BRK1-201ENST00000530758 CXorf38Q8TB03 319 aa17.37■□□□□ 0.37
BRK1-201ENST00000530758 ENOX1Q8TC92 643 aaKnown RBP17.37■□□□□ 0.37
BRK1-201ENST00000530758 C18orf25Q96B23 403 aaPredicted RBP17.37■□□□□ 0.37
BRK1-201ENST00000530758 FAM212AQ96EL1 285 aa17.37■□□□□ 0.37
BRK1-201ENST00000530758 BPIFA3Q9BQP9 254 aa17.37■□□□□ 0.37
BRK1-201ENST00000530758 COLEC11Q9BWP8 271 aa17.37■□□□□ 0.37
BRK1-201ENST00000530758 SRRTQ9BXP5 876 aaKnown RBP17.37■□□□□ 0.37
BRK1-201ENST00000530758 SPG21Q9NZD8 308 aa17.37■□□□□ 0.37
BRK1-201ENST00000530758 MYO9BQ13459 2157 aa17.37■□□□□ 0.37
BRK1-201ENST00000530758 A0A0C4DFX4 3053 aa17.37■□□□□ 0.37
BRK1-201ENST00000530758 ANO9A1A5B4 782 aa17.36■□□□□ 0.37
BRK1-201ENST00000530758 SYCE3A1L190 88 aa17.36■□□□□ 0.37
BRK1-201ENST00000530758 PIRO00625 290 aa17.36■□□□□ 0.37
BRK1-201ENST00000530758 GNA14O95837 355 aa17.36■□□□□ 0.37
BRK1-201ENST00000530758 PAX3P23760 479 aa17.36■□□□□ 0.37
BRK1-201ENST00000530758 DUOXA2Q1HG44 320 aa17.36■□□□□ 0.37
BRK1-201ENST00000530758 C1orf220Q5T0J3 134 aa17.36■□□□□ 0.37
BRK1-201ENST00000530758 CD300LGQ6UXG3 332 aa17.36■□□□□ 0.37
BRK1-201ENST00000530758 USP37Q86T82 979 aa17.36■□□□□ 0.37
BRK1-201ENST00000530758 RNF168Q8IYW5 571 aaPredicted RBP17.36■□□□□ 0.37
BRK1-201ENST00000530758 BEST2Q8NFU1 509 aa17.36■□□□□ 0.37
BRK1-201ENST00000530758 NOC3LQ8WTT2 800 aaKnown RBP17.36■□□□□ 0.37
BRK1-201ENST00000530758 ZNF516Q92618 1163 aa17.36■□□□□ 0.37
BRK1-201ENST00000530758 IGSF21Q96ID5 467 aa17.36■□□□□ 0.37
BRK1-201ENST00000530758 FNBP1Q96RU3 617 aa17.36■□□□□ 0.37
BRK1-201ENST00000530758 CGRRF1Q99675 332 aa17.36■□□□□ 0.37
BRK1-201ENST00000530758 PAAF1Q9BRP4 392 aa17.36■□□□□ 0.37
BRK1-201ENST00000530758 METTL14Q9HCE5 456 aaKnown RBP17.36■□□□□ 0.37
BRK1-201ENST00000530758 MARCH5Q9NX47 278 aa17.36■□□□□ 0.37
BRK1-201ENST00000530758 STK39Q9UEW8 545 aa17.36■□□□□ 0.37
BRK1-201ENST00000530758 LZTS1Q9Y250 596 aa17.36■□□□□ 0.37
BRK1-201ENST00000530758 SCN1AP35498 2009 aa17.36■□□□□ 0.37
BRK1-201ENST00000530758 REV3LO60673 3130 aa17.35■□□□□ 0.37
BRK1-201ENST00000530758 LRRIQ3A6PVS8 624 aaPredicted RBP17.35■□□□□ 0.37
BRK1-201ENST00000530758 EPB41P11171 864 aaKnown RBP17.35■□□□□ 0.37
BRK1-201ENST00000530758 CTNNB1P35222 781 aa17.35■□□□□ 0.37
BRK1-201ENST00000530758 OR1G1P47890 313 aa17.35■□□□□ 0.37
BRK1-201ENST00000530758 CLCNKBP51801 687 aa17.35■□□□□ 0.37
BRK1-201ENST00000530758 VAMP7P51809 220 aa17.35■□□□□ 0.37
BRK1-201ENST00000530758 UBE3AQ05086 875 aa17.35■□□□□ 0.37
BRK1-201ENST00000530758 BFSP1Q12934 665 aa17.35■□□□□ 0.37
BRK1-201ENST00000530758 ADGRE1Q14246 886 aa17.35■□□□□ 0.37
BRK1-201ENST00000530758 C15orf39Q6ZRI6 1047 aa17.35■□□□□ 0.37
BRK1-201ENST00000530758 C11orf57Q6ZUT1 292 aaPredicted RBP17.35■□□□□ 0.37
BRK1-201ENST00000530758 IRF2BP1Q8IU81 584 aa17.35■□□□□ 0.37
BRK1-201ENST00000530758 KLHL23Q8NBE8 558 aa17.35■□□□□ 0.37
BRK1-201ENST00000530758 EEF2KMTQ96G04 330 aa17.35■□□□□ 0.37
BRK1-201ENST00000530758 POP1Q99575 1024 aaKnown RBP17.35■□□□□ 0.37
BRK1-201ENST00000530758 C11orf84Q9BUA3 381 aaPredicted RBP17.35■□□□□ 0.37
BRK1-201ENST00000530758 PRDM12Q9H4Q4 367 aa17.35■□□□□ 0.37
BRK1-201ENST00000530758 GOLGA2P5Q9HBQ8 144 aa17.35■□□□□ 0.37
BRK1-201ENST00000530758 DPP3Q9NY33 737 aa17.35■□□□□ 0.37
BRK1-201ENST00000530758 TUBGCP4Q9UGJ1 667 aa17.35■□□□□ 0.37
BRK1-201ENST00000530758 PTPRJQ12913 1337 aa17.35■□□□□ 0.37
BRK1-201ENST00000530758 CASTOR2A6NHX0 329 aa17.34■□□□□ 0.37
BRK1-201ENST00000530758 NT5C1B-RDH14C9J2C7 533 aa17.34■□□□□ 0.37
BRK1-201ENST00000530758 FGF18O76093 207 aa17.34■□□□□ 0.37
BRK1-201ENST00000530758 CAVIN2O95810 425 aa17.34■□□□□ 0.37
BRK1-201ENST00000530758 C4BPAP04003 597 aaKnown RBP17.34■□□□□ 0.37
BRK1-201ENST00000530758 ITGB1P05556 798 aa17.34■□□□□ 0.37
BRK1-201ENST00000530758 KRT13P13646 458 aa17.34■□□□□ 0.37
BRK1-201ENST00000530758 FOSL2P15408 326 aa17.34■□□□□ 0.37
BRK1-201ENST00000530758 TNNI1P19237 187 aa17.34■□□□□ 0.37
BRK1-201ENST00000530758 GTF2H1P32780 548 aa17.34■□□□□ 0.37
BRK1-201ENST00000530758 DLG4P78352 724 aa17.34■□□□□ 0.37
BRK1-201ENST00000530758 C9orf57Q5W0N0 161 aa17.34■□□□□ 0.37
BRK1-201ENST00000530758 DDX53Q86TM3 631 aaKnown RBP17.34■□□□□ 0.37
BRK1-201ENST00000530758 TMEM173Q86WV6 379 aaPredicted RBP17.34■□□□□ 0.37
BRK1-201ENST00000530758 C1orf127Q8N9H9 656 aa17.34■□□□□ 0.37
BRK1-201ENST00000530758 FBXO22Q8NEZ5 403 aa17.34■□□□□ 0.37
BRK1-201ENST00000530758 OR5B17Q8NGF7 314 aa17.34■□□□□ 0.37
BRK1-201ENST00000530758 MAFAQ8NHW3 353 aaPredicted RBP17.34■□□□□ 0.37
BRK1-201ENST00000530758 SPPL3Q8TCT6 385 aa17.34■□□□□ 0.37
BRK1-201ENST00000530758 CCDC127Q96BQ5 260 aa17.34■□□□□ 0.37
BRK1-201ENST00000530758 ANKRD36BP1Q96IX9 119 aa17.34■□□□□ 0.37
BRK1-201ENST00000530758 NAT10Q9H0A0 1025 aaKnown RBP17.34■□□□□ 0.37
BRK1-201ENST00000530758 DNAJC25Q9H1X3 360 aa17.34■□□□□ 0.37
BRK1-201ENST00000530758 THAP9Q9H5L6 903 aa17.34■□□□□ 0.37
BRK1-201ENST00000530758 ARMCX3Q9UH62 379 aaPredicted RBP17.34■□□□□ 0.37
BRK1-201ENST00000530758 ITGA11Q9UKX5 1188 aa17.34■□□□□ 0.37
BRK1-201ENST00000530758 PODXLO00592 558 aa17.33■□□□□ 0.36
BRK1-201ENST00000530758 DLATP10515 647 aaKnown RBP17.33■□□□□ 0.36
BRK1-201ENST00000530758 POU3F3P20264 500 aaPredicted RBP17.33■□□□□ 0.36
BRK1-201ENST00000530758 PBX3P40426 434 aa17.33■□□□□ 0.36
BRK1-201ENST00000530758 AARSP49588 968 aaKnown RBP eCLIP17.33■□□□□ 0.36
BRK1-201ENST00000530758 TFAMQ00059 246 aaKnown RBP17.33■□□□□ 0.36
BRK1-201ENST00000530758 KRT17Q04695 432 aa17.33■□□□□ 0.36
BRK1-201ENST00000530758 GPM6BQ13491 265 aa17.33■□□□□ 0.36
BRK1-201ENST00000530758 ANO6Q4KMQ2 910 aa17.33■□□□□ 0.36
BRK1-201ENST00000530758 TRAPPC11Q7Z392 1133 aa17.33■□□□□ 0.36
BRK1-201ENST00000530758 C3orf58Q8NDZ4 430 aa17.33■□□□□ 0.36
BRK1-201ENST00000530758 BCL7CQ8WUZ0 217 aaPredicted RBP17.33■□□□□ 0.36
BRK1-201ENST00000530758 TMEM169Q96HH4 297 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms