RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 LARP4BQ92615 738 aaKnown RBP14.98□□□□□ -0.01
PCF11-204ENST00000530660 KLHL4Q9C0H6 718 aa14.98□□□□□ -0.01
PCF11-204ENST00000530660 TAS2R14Q9NYV8 317 aa14.98□□□□□ -0.01
PCF11-204ENST00000530660 ASIC3Q9UHC3 531 aa14.98□□□□□ -0.01
PCF11-204ENST00000530660 DIS3Q9Y2L1 958 aaKnown RBP14.98□□□□□ -0.01
PCF11-204ENST00000530660 PVALEFA0A1B0GWK0 134 aa14.97□□□□□ -0.01
PCF11-204ENST00000530660 DKC1O60832 514 aaKnown RBP eCLIP14.97□□□□□ -0.01
PCF11-204ENST00000530660 SERPINB7O75635 380 aa14.97□□□□□ -0.01
PCF11-204ENST00000530660 GYS1P13807 737 aa14.97□□□□□ -0.01
PCF11-204ENST00000530660 PON1P27169 355 aa14.97□□□□□ -0.01
PCF11-204ENST00000530660 SMARCA1P28370 1054 aa14.97□□□□□ -0.01
PCF11-204ENST00000530660 SLC5A2P31639 672 aa14.97□□□□□ -0.01
PCF11-204ENST00000530660 AP2B1P63010 937 aa14.97□□□□□ -0.01
PCF11-204ENST00000530660 KCNK18Q7Z418 384 aa14.97□□□□□ -0.01
PCF11-204ENST00000530660 PROM2Q8N271 834 aa14.97□□□□□ -0.01
PCF11-204ENST00000530660 SYT2Q8N9I0 419 aaPredicted RBP14.97□□□□□ -0.01
PCF11-204ENST00000530660 DQX1Q8TE96 717 aaKnown RBP14.97□□□□□ -0.01
PCF11-204ENST00000530660 ZNF75CPQ92670 426 aaPredicted RBP14.97□□□□□ -0.01
PCF11-204ENST00000530660 THAP2Q9H0W7 228 aa14.97□□□□□ -0.01
PCF11-204ENST00000530660 C12orf65Q9H3J6 166 aaKnown RBP14.97□□□□□ -0.01
PCF11-204ENST00000530660 TIMMDC1Q9NPL8 285 aa14.97□□□□□ -0.01
PCF11-204ENST00000530660 LGALS13Q9UHV8 139 aa14.97□□□□□ -0.01
PCF11-204ENST00000530660 MYOCOSA0A1B0GUC4 107 aa14.97□□□□□ -0.01
PCF11-204ENST00000530660 H3BRJ5 948 aa14.97□□□□□ -0.01
PCF11-204ENST00000530660 UQCRBP14927 111 aa14.97□□□□□ -0.01
PCF11-204ENST00000530660 PPIDQ08752 370 aaKnown RBP14.97□□□□□ -0.01
PCF11-204ENST00000530660 MMEL1Q495T6 779 aa14.97□□□□□ -0.01
PCF11-204ENST00000530660 FYB2Q5VWT5 728 aa14.97□□□□□ -0.01
PCF11-204ENST00000530660 CYP4F22Q6NT55 531 aa14.97□□□□□ -0.01
PCF11-204ENST00000530660 SLC2A7Q6PXP3 512 aa14.97□□□□□ -0.01
PCF11-204ENST00000530660 MAML1Q92585 1016 aa14.97□□□□□ -0.01
PCF11-204ENST00000530660 ALG13Q9NP73 1137 aaKnown RBP14.97□□□□□ -0.01
PCF11-204ENST00000530660 PCDHGB4Q9UN71 923 aa14.97□□□□□ -0.01
PCF11-204ENST00000530660 STX8Q9UNK0 236 aa14.97□□□□□ -0.01
PCF11-204ENST00000530660 MTMR7Q9Y216 660 aa14.97□□□□□ -0.01
PCF11-204ENST00000530660 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.97□□□□□ -0.01
PCF11-204ENST00000530660 PCDHGB5Q9Y5G0 923 aa14.97□□□□□ -0.01
PCF11-204ENST00000530660 MROH5Q6ZUA9 1318 aa14.97□□□□□ -0.01
PCF11-204ENST00000530660 DOCK2Q92608 1830 aa14.97□□□□□ -0.01
PCF11-204ENST00000530660 B2RBV5 119 aa14.97□□□□□ -0.01
PCF11-204ENST00000530660 ALDH2P05091 517 aa14.97□□□□□ -0.01
PCF11-204ENST00000530660 TFPTP0C1Z6 253 aa14.97□□□□□ -0.01
PCF11-204ENST00000530660 TROVE2P10155 538 aaKnown RBP eCLIP14.97□□□□□ -0.01
PCF11-204ENST00000530660 RARBP10826 455 aa14.97□□□□□ -0.01
PCF11-204ENST00000530660 HNRNPDQ14103 355 aaKnown RBP14.97□□□□□ -0.01
PCF11-204ENST00000530660 MYLK3Q32MK0 819 aa14.97□□□□□ -0.01
PCF11-204ENST00000530660 MDH1BQ5I0G3 518 aa14.97□□□□□ -0.01
PCF11-204ENST00000530660 SPDYAQ5MJ70 313 aa14.97□□□□□ -0.01
PCF11-204ENST00000530660 FBXL19Q6PCT2 694 aa14.97□□□□□ -0.01
PCF11-204ENST00000530660 CYFIP1Q7L576 1253 aa14.97□□□□□ -0.01
PCF11-204ENST00000530660 CPNE8Q86YQ8 564 aa14.97□□□□□ -0.01
PCF11-204ENST00000530660 C1orf54Q8WWF1 131 aa14.97□□□□□ -0.01
PCF11-204ENST00000530660 PYDC1Q8WXC3 89 aa14.97□□□□□ -0.01
PCF11-204ENST00000530660 ARPC5LQ9BPX5 153 aa14.97□□□□□ -0.01
PCF11-204ENST00000530660 EPB41L1Q9H4G0 881 aa14.97□□□□□ -0.01
PCF11-204ENST00000530660 SEPT11Q9NVA2 429 aaKnown RBP14.97□□□□□ -0.01
PCF11-204ENST00000530660 NDUFA13Q9P0J0 144 aa14.97□□□□□ -0.01
PCF11-204ENST00000530660 DUOX1Q9NRD9 1551 aa14.97□□□□□ -0.01
PCF11-204ENST00000530660 KANSL1LA0AUZ9 987 aa14.96□□□□□ -0.01
PCF11-204ENST00000530660 USP17L12C9JPN9 530 aa14.96□□□□□ -0.01
PCF11-204ENST00000530660 USP17L21D6R901 530 aa14.96□□□□□ -0.01
PCF11-204ENST00000530660 CLPTM1O96005 669 aa14.96□□□□□ -0.01
PCF11-204ENST00000530660 PRKCIP41743 596 aa14.96□□□□□ -0.01
PCF11-204ENST00000530660 CACNB1Q02641 598 aaPredicted RBP14.96□□□□□ -0.01
PCF11-204ENST00000530660 KRT17Q04695 432 aa14.96□□□□□ -0.01
PCF11-204ENST00000530660 PKN2Q16513 984 aaKnown RBP14.96□□□□□ -0.01
PCF11-204ENST00000530660 AK8Q96MA6 479 aa14.96□□□□□ -0.01
PCF11-204ENST00000530660 NUDT12Q9BQG2 462 aa14.96□□□□□ -0.01
PCF11-204ENST00000530660 TRABDQ9H4I3 376 aa14.96□□□□□ -0.01
PCF11-204ENST00000530660 BAZ2AQ9UIF9 1905 aaKnown RBP14.96□□□□□ -0.01
PCF11-204ENST00000530660 ALS2Q96Q42 1657 aa14.96□□□□□ -0.01
PCF11-204ENST00000530660 SYNGAP1Q96PV0 1343 aa14.96□□□□□ -0.01
PCF11-204ENST00000530660 C15orf38-AP3S2A0A0A6YYH1 394 aa14.96□□□□□ -0.01
PCF11-204ENST00000530660 M0R2N6 131 aa14.96□□□□□ -0.01
PCF11-204ENST00000530660 CHN2P52757 468 aa14.96□□□□□ -0.01
PCF11-204ENST00000530660 ITGA8P53708 1063 aa14.96□□□□□ -0.01
PCF11-204ENST00000530660 ASPHQ12797 758 aa14.96□□□□□ -0.01
PCF11-204ENST00000530660 C1orf146Q5VVC0 180 aa14.96□□□□□ -0.01
PCF11-204ENST00000530660 RNF111Q6ZNA4 994 aa14.96□□□□□ -0.01
PCF11-204ENST00000530660 ARPINQ7Z6K5 226 aa14.96□□□□□ -0.01
PCF11-204ENST00000530660 TRABD2AQ86V40 505 aa14.96□□□□□ -0.01
PCF11-204ENST00000530660 NUP93Q8N1F7 819 aa14.96□□□□□ -0.01
PCF11-204ENST00000530660 PNMA5Q96PV4 448 aa14.96□□□□□ -0.01
PCF11-204ENST00000530660 ASAP1Q9ULH1 1129 aa14.96□□□□□ -0.01
PCF11-204ENST00000530660 FAF1Q9UNN5 650 aaPredicted RBP14.96□□□□□ -0.01
PCF11-204ENST00000530660 TMED5Q9Y3A6 229 aa14.96□□□□□ -0.01
PCF11-204ENST00000530660 PDE8AO60658 829 aa14.95□□□□□ -0.02
PCF11-204ENST00000530660 RPL5P46777 297 aaKnown RBP14.95□□□□□ -0.02
PCF11-204ENST00000530660 HDAC4P56524 1084 aa14.95□□□□□ -0.02
PCF11-204ENST00000530660 UGT2A3Q6UWM9 527 aa14.95□□□□□ -0.02
PCF11-204ENST00000530660 PATL1Q86TB9 770 aaKnown RBP14.95□□□□□ -0.02
PCF11-204ENST00000530660 MPHOSPH6Q99547 160 aaKnown RBP14.95□□□□□ -0.02
PCF11-204ENST00000530660 RIOK1Q9BRS2 568 aaKnown RBP14.95□□□□□ -0.02
PCF11-204ENST00000530660 THTPAQ9BU02 230 aa14.95□□□□□ -0.02
PCF11-204ENST00000530660 SPZ1Q9BXG8 430 aa14.95□□□□□ -0.02
PCF11-204ENST00000530660 LIN28AQ9H9Z2 209 aaKnown RBP14.95□□□□□ -0.02
PCF11-204ENST00000530660 HDAC9Q9UKV0 1011 aa14.95□□□□□ -0.02
PCF11-204ENST00000530660 TELO2Q9Y4R8 837 aa14.95□□□□□ -0.02
PCF11-204ENST00000530660 ZMYM2Q9UBW7 1377 aa14.95□□□□□ -0.02
PCF11-204ENST00000530660 POC1B-GALNT4F8VUJ3 575 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms