RNA–Protein interactions for RNA: ENST00000530579.6

NEDD8-MDP1-201, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 2

Gene NEDD8-MDP1, Length 471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-201ENST00000530579 DEKP35659 375 aaKnown RBP9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 SCNN1GP51170 649 aa9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 MYL6P60660 151 aa9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 POLR2FP61218 127 aaKnown RBP9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 TRIM14Q14142 442 aa9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 SGSM1Q2NKQ1 1148 aa9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 TSR1Q2NL82 804 aaKnown RBP9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 XKR4Q5GH76 650 aa9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 KLHDC7AQ5VTJ3 777 aa9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 TRIM65Q6PJ69 517 aa9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.17□□□□□ -0.947e-16■■■□□ 19.1
NEDD8-MDP1-201ENST00000530579 CCDC186Q7Z3E2 898 aa9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 ZNF598Q86UK7 904 aaKnown RBP9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 ABI1Q8IZP0 508 aa9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 ZNF397Q8NF99 534 aaPredicted RBP9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 HELQQ8TDG4 1101 aa9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 ELMO3Q96BJ8 720 aa9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 IQCDQ96DY2 449 aa9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 PDLIM2Q96JY6 352 aa9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 NT5C1BQ96P26 610 aa9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 PPP1R9BQ96SB3 815 aa9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 PI4K2AQ9BTU6 479 aa9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 IMPG2Q9BZV3 1241 aa9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 ELAC1Q9H777 363 aaKnown RBP9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 UBE2TQ9NPD8 197 aaPredicted RBP9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 PLCB1Q9NQ66 1216 aa9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 SLC38A7Q9NVC3 462 aa9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 MIOSQ9NXC5 875 aa9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 TUBGCP4Q9UGJ1 667 aa9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 ITGA11Q9UKX5 1188 aa9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 LUC7L2Q9Y383 392 aaKnown RBP9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 COQ4Q9Y3A0 265 aa9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 PCNTO95613 3336 aa9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 EVPLQ92817 2033 aa9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 SIP14410 1827 aa9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 ZBBXA8MT70 800 aa9.16□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 PTGESO14684 152 aa9.16□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 HOXA2O43364 376 aa9.16□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 EFCAB14O75071 495 aa9.16□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 ZC3H11AO75152 810 aaKnown RBP eCLIP9.16□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 LRRN2O75325 713 aa9.16□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 CYP3A5P20815 502 aa9.16□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 POLR2BP30876 1174 aaKnown RBP9.16□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 CASP14P31944 242 aa9.16□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 KCNJ6P48051 423 aa9.16□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 AFF1P51825 1210 aaKnown RBP9.16□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 ADKP55263 362 aaKnown RBP9.16□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 RNASELQ05823 741 aaKnown RBP9.16□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 MYO1EQ12965 1108 aa9.16□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 TBX2Q13207 712 aaPredicted RBP9.16□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 ZBTB6Q15916 424 aa9.16□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 ARHGAP44Q17R89 818 aa9.16□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 NOMO2Q5JPE7 1267 aa9.16□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 PHLDB3Q6NSJ2 640 aa9.16□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 FAM117BQ6P1L5 589 aa9.16□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 GJB7Q6PEY0 223 aa9.16□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 ZNF365Q70YC5 407 aa9.16□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 RRAGAQ7L523 313 aa9.16□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 OTOP2Q7RTS6 562 aa9.16□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 NPAS4Q8IUM7 802 aa9.16□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 ARHGEF19Q8IW93 802 aa9.16□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 TMEM130Q8N3G9 435 aa9.16□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 PPM1KQ8N3J5 372 aa9.16□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 C1orf127Q8N9H9 656 aa9.16□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 LMO3Q8TAP4 145 aa9.16□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 TATDN2Q93075 761 aa9.16□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 VWCEQ96DN2 955 aa9.16□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 HPDLQ96IR7 371 aa9.16□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 FAM193BQ96PV7 902 aaPredicted RBP9.16□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 PPP1R10Q96QC0 940 aaKnown RBP9.16□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 EDEM3Q9BZQ6 932 aa9.16□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 SIX2Q9NPC8 291 aa9.16□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 NLRC4Q9NPP4 1024 aa9.16□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 KANSL3Q9P2N6 904 aa9.16□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 NXF1Q9UBU9 619 aaKnown RBP9.16□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 DNAJC12Q9UKB3 198 aa9.16□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 CAPN11Q9UMQ6 739 aa9.16□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 NR2E3Q9Y5X4 410 aa9.16□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 TRIP12Q14669 1992 aaPredicted RBP9.15□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 A0A1W2PQJ5 194 aa9.15□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 EPHB6O15197 1021 aa9.15□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 BAIAP3O94812 1187 aa9.15□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 NOL4O94818 638 aa9.15□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 GYPCP04921 128 aa9.15□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 P4HA1P13674 534 aa9.15□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 UCHL3P15374 230 aa9.15□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 ATICP31939 592 aa9.15□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 KRT9P35527 623 aa9.15□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 USP8P40818 1118 aa9.15□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 GATMP50440 423 aa9.15□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 MFAP3P55082 362 aa9.15□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 GSDMDP57764 484 aa9.15□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 ZBED6P86452 979 aa9.15□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 GOLGA8FQ08AF8 430 aa9.15□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 GOLGA8DPQ0D2H9 430 aa9.15□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 GRIK3Q13003 919 aa9.15□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 RAPGEF1Q13905 1077 aa9.15□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 ZNF699Q32M78 642 aa9.15□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 FIGNQ5HY92 759 aa9.15□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 ZNF667Q5HYK9 610 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms