RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 PLIN2Q99541 437 aa22.73■■□□□ 1.23
TSPAN4-219ENST00000530404 TCHPQ9BT92 498 aa22.73■■□□□ 1.23
TSPAN4-219ENST00000530404 TOPORSQ9NS56 1045 aaPredicted RBP22.73■■□□□ 1.23
TSPAN4-219ENST00000530404 WDR27A2RRH5 827 aa22.72■■□□□ 1.23
TSPAN4-219ENST00000530404 ABLIM1O14639 778 aa22.72■■□□□ 1.23
TSPAN4-219ENST00000530404 TRAPPC3O43617 180 aa22.72■■□□□ 1.23
TSPAN4-219ENST00000530404 STARD6P59095 220 aa22.72■■□□□ 1.23
TSPAN4-219ENST00000530404 ERICH6BQ5W0A0 696 aa22.72■■□□□ 1.23
TSPAN4-219ENST00000530404 DTHD1Q6ZMT9 781 aa22.72■■□□□ 1.23
TSPAN4-219ENST00000530404 MCRS1Q96EZ8 462 aa22.72■■□□□ 1.23
TSPAN4-219ENST00000530404 DRC1Q96MC2 740 aa22.72■■□□□ 1.23
TSPAN4-219ENST00000530404 ACAP3Q96P50 834 aa22.72■■□□□ 1.23
TSPAN4-219ENST00000530404 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.72■■□□□ 1.23
TSPAN4-219ENST00000530404 MRPS23Q9Y3D9 190 aaKnown RBP22.72■■□□□ 1.23
TSPAN4-219ENST00000530404 STK24Q9Y6E0 443 aa22.72■■□□□ 1.23
TSPAN4-219ENST00000530404 COL4A2P08572 1712 aa22.71■■□□□ 1.23
TSPAN4-219ENST00000530404 RHOP08100 348 aa22.71■■□□□ 1.23
TSPAN4-219ENST00000530404 POU2F2P09086 479 aa22.71■■□□□ 1.23
TSPAN4-219ENST00000530404 CEBPBP17676 345 aa22.71■■□□□ 1.23
TSPAN4-219ENST00000530404 PROZP22891 400 aa22.71■■□□□ 1.23
TSPAN4-219ENST00000530404 MLF2Q15773 248 aaPredicted RBP22.71■■□□□ 1.23
TSPAN4-219ENST00000530404 MCTP1Q6DN14 999 aa22.71■■□□□ 1.23
TSPAN4-219ENST00000530404 MPZL3Q6UWV2 235 aa22.71■■□□□ 1.23
TSPAN4-219ENST00000530404 PLA2G2FQ9BZM2 168 aa22.71■■□□□ 1.23
TSPAN4-219ENST00000530404 SLC38A7Q9NVC3 462 aa22.71■■□□□ 1.23
TSPAN4-219ENST00000530404 ANKFY1Q9P2R3 1169 aa22.71■■□□□ 1.23
TSPAN4-219ENST00000530404 MTF2Q9Y483 593 aaPredicted RBP22.71■■□□□ 1.23
TSPAN4-219ENST00000530404 KIF26AQ9ULI4 1882 aaPredicted RBP22.71■■□□□ 1.23
TSPAN4-219ENST00000530404 SP9P0CG40 484 aa22.7■■□□□ 1.22
TSPAN4-219ENST00000530404 MCF2P10911 925 aa22.7■■□□□ 1.22
TSPAN4-219ENST00000530404 CD72P21854 359 aa22.7■■□□□ 1.22
TSPAN4-219ENST00000530404 SLC44A4Q53GD3 710 aa22.7■■□□□ 1.22
TSPAN4-219ENST00000530404 C1orf210Q8IVY1 113 aa22.7■■□□□ 1.22
TSPAN4-219ENST00000530404 PNMA5Q96PV4 448 aa22.7■■□□□ 1.22
TSPAN4-219ENST00000530404 CNTN3Q9P232 1028 aa22.7■■□□□ 1.22
TSPAN4-219ENST00000530404 KCNH3Q9ULD8 1083 aa22.7■■□□□ 1.22
TSPAN4-219ENST00000530404 TSC2P49815 1807 aa22.7■■□□□ 1.22
TSPAN4-219ENST00000530404 LAD1O00515 517 aa22.69■■□□□ 1.22
TSPAN4-219ENST00000530404 SEC24AO95486 1093 aa22.69■■□□□ 1.22
TSPAN4-219ENST00000530404 LRG1P02750 347 aa22.69■■□□□ 1.22
TSPAN4-219ENST00000530404 KCNE1P15382 129 aa22.69■■□□□ 1.22
TSPAN4-219ENST00000530404 ELF1P32519 619 aa22.69■■□□□ 1.22
TSPAN4-219ENST00000530404 PRPHP41219 470 aa22.69■■□□□ 1.22
TSPAN4-219ENST00000530404 CACNB1Q02641 598 aaPredicted RBP22.69■■□□□ 1.22
TSPAN4-219ENST00000530404 UBXN2BQ14CS0 331 aa22.69■■□□□ 1.22
TSPAN4-219ENST00000530404 SLC8B1Q6J4K2 584 aa22.69■■□□□ 1.22
TSPAN4-219ENST00000530404 ZNF461Q8TAF7 563 aa22.69■■□□□ 1.22
TSPAN4-219ENST00000530404 TCEAL4Q96EI5 215 aa22.69■■□□□ 1.22
TSPAN4-219ENST00000530404 SHDQ96IW2 340 aa22.69■■□□□ 1.22
TSPAN4-219ENST00000530404 RBM19Q9Y4C8 960 aaKnown RBP22.69■■□□□ 1.22
TSPAN4-219ENST00000530404 NUB1Q9Y5A7 615 aa22.69■■□□□ 1.22
TSPAN4-219ENST00000530404 SCN1AP35498 2009 aa22.69■■□□□ 1.22
TSPAN4-219ENST00000530404 NPHP3-ACAD11A0A0J9YXS1 232 aa22.68■■□□□ 1.22
TSPAN4-219ENST00000530404 KANSL1LA0AUZ9 987 aa22.68■■□□□ 1.22
TSPAN4-219ENST00000530404 NRG2O14511 850 aaPredicted RBP22.68■■□□□ 1.22
TSPAN4-219ENST00000530404 PRRG1O14668 218 aa22.68■■□□□ 1.22
TSPAN4-219ENST00000530404 ABLIM3O94929 683 aa22.68■■□□□ 1.22
TSPAN4-219ENST00000530404 LMNAP02545 664 aaKnown RBP22.68■■□□□ 1.22
TSPAN4-219ENST00000530404 SPAG1Q07617 926 aa22.68■■□□□ 1.22
TSPAN4-219ENST00000530404 C8orf34Q49A92 452 aa22.68■■□□□ 1.22
TSPAN4-219ENST00000530404 CORO1BQ9BR76 489 aa22.68■■□□□ 1.22
TSPAN4-219ENST00000530404 CYP4F11Q9HBI6 524 aa22.68■■□□□ 1.22
TSPAN4-219ENST00000530404 TUBGCP4Q9UGJ1 667 aa22.68■■□□□ 1.22
TSPAN4-219ENST00000530404 FBXL5Q9UKA1 691 aa22.68■■□□□ 1.22
TSPAN4-219ENST00000530404 OTOGLQ3ZCN5 2332 aa22.68■■□□□ 1.22
TSPAN4-219ENST00000530404 ZNF638Q14966 1978 aaKnown RBP22.67■■□□□ 1.22
TSPAN4-219ENST00000530404 ARHGEF37A1IGU5 675 aa22.67■■□□□ 1.22
TSPAN4-219ENST00000530404 TBC1D4O60343 1298 aa22.67■■□□□ 1.22
TSPAN4-219ENST00000530404 PTPN2P17706 415 aa22.67■■□□□ 1.22
TSPAN4-219ENST00000530404 GUCY2CP25092 1073 aa22.67■■□□□ 1.22
TSPAN4-219ENST00000530404 MCM4P33991 863 aa22.67■■□□□ 1.22
TSPAN4-219ENST00000530404 STRN3Q13033 797 aa22.67■■□□□ 1.22
TSPAN4-219ENST00000530404 NOLC1Q14978 699 aaKnown RBP eCLIP22.67■■□□□ 1.22
TSPAN4-219ENST00000530404 SLC10A6Q3KNW5 377 aa22.67■■□□□ 1.22
TSPAN4-219ENST00000530404 TANGO2Q6ICL3 276 aa22.67■■□□□ 1.22
TSPAN4-219ENST00000530404 RTL10Q7L3V2 364 aa22.67■■□□□ 1.22
TSPAN4-219ENST00000530404 MAML2Q8IZL2 1156 aaPredicted RBP22.67■■□□□ 1.22
TSPAN4-219ENST00000530404 TMEM161BQ8NDZ6 487 aa22.67■■□□□ 1.22
TSPAN4-219ENST00000530404 DDX23Q9BUQ8 820 aaKnown RBP22.67■■□□□ 1.22
TSPAN4-219ENST00000530404 HAPLN2Q9GZV7 340 aa22.67■■□□□ 1.22
TSPAN4-219ENST00000530404 DNAH14Q0VDD8 3507 aa22.66■■□□□ 1.22
TSPAN4-219ENST00000530404 VWA3AA6NCI4 1184 aa22.66■■□□□ 1.22
TSPAN4-219ENST00000530404 SYN3O14994 580 aa22.66■■□□□ 1.22
TSPAN4-219ENST00000530404 CXCL8P10145 99 aa22.66■■□□□ 1.22
TSPAN4-219ENST00000530404 PLS3P13797 630 aa22.66■■□□□ 1.22
TSPAN4-219ENST00000530404 ATF2P15336 505 aa22.66■■□□□ 1.22
TSPAN4-219ENST00000530404 MATR3P43243 847 aaKnown RBP eCLIP22.66■■□□□ 1.22
TSPAN4-219ENST00000530404 ATP2C1P98194 919 aaPredicted RBP22.66■■□□□ 1.22
TSPAN4-219ENST00000530404 PRKCQQ04759 706 aa22.66■■□□□ 1.22
TSPAN4-219ENST00000530404 MRPL58Q14197 206 aaKnown RBP22.66■■□□□ 1.22
TSPAN4-219ENST00000530404 CTXN3Q4LDR2 81 aa22.66■■□□□ 1.22
TSPAN4-219ENST00000530404 PRSS36Q5K4E3 855 aa22.66■■□□□ 1.22
TSPAN4-219ENST00000530404 HS6ST3Q8IZP7 471 aa22.66■■□□□ 1.22
TSPAN4-219ENST00000530404 TBC1D32Q96NH3 1257 aa22.66■■□□□ 1.22
TSPAN4-219ENST00000530404 C17orf75Q9HAS0 396 aa22.66■■□□□ 1.22
TSPAN4-219ENST00000530404 SPATA6Q9NWH7 488 aaPredicted RBP22.66■■□□□ 1.22
TSPAN4-219ENST00000530404 DAXXQ9UER7 740 aaPredicted RBP22.66■■□□□ 1.22
TSPAN4-219ENST00000530404 INSL5Q9Y5Q6 135 aa22.66■■□□□ 1.22
TSPAN4-219ENST00000530404 NUP210Q8TEM1 1887 aaPredicted RBP22.65■■□□□ 1.22
TSPAN4-219ENST00000530404 FAM170BA6NMN3 283 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms