RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 MCF2P10911 925 aa15.54■□□□□ 0.08
TTC39A-216ENST00000530004 TNNT1P13805 278 aa15.54■□□□□ 0.08
TTC39A-216ENST00000530004 TNNI1P19237 187 aa15.54■□□□□ 0.08
TTC39A-216ENST00000530004 EIF4A3P38919 411 aaKnown RBP15.54■□□□□ 0.08
TTC39A-216ENST00000530004 ARID5AQ03989 594 aa15.54■□□□□ 0.08
TTC39A-216ENST00000530004 DCAF4L1Q3SXM0 396 aa15.54■□□□□ 0.08
TTC39A-216ENST00000530004 TDRD12Q587J7 1177 aaKnown RBP15.54■□□□□ 0.08
TTC39A-216ENST00000530004 HGSNATQ68CP4 663 aa15.54■□□□□ 0.08
TTC39A-216ENST00000530004 LMBRD2Q68DH5 695 aaPredicted RBP15.54■□□□□ 0.08
TTC39A-216ENST00000530004 PHLDB3Q6NSJ2 640 aa15.54■□□□□ 0.08
TTC39A-216ENST00000530004 C16orf59Q7L2K0 433 aa15.54■□□□□ 0.08
TTC39A-216ENST00000530004 BRSK2Q8IWQ3 736 aa15.54■□□□□ 0.08
TTC39A-216ENST00000530004 TAS1R2Q8TE23 839 aa15.54■□□□□ 0.08
TTC39A-216ENST00000530004 ZNF516Q92618 1163 aa15.54■□□□□ 0.08
TTC39A-216ENST00000530004 LBHD1Q9BQE6 289 aaPredicted RBP15.54■□□□□ 0.08
TTC39A-216ENST00000530004 DEF6Q9H4E7 631 aa15.54■□□□□ 0.08
TTC39A-216ENST00000530004 FAM105AQ9NUU6 356 aa15.54■□□□□ 0.08
TTC39A-216ENST00000530004 COQ4Q9Y3A0 265 aa15.54■□□□□ 0.08
TTC39A-216ENST00000530004 DAAM1Q9Y4D1 1078 aa15.54■□□□□ 0.08
TTC39A-216ENST00000530004 SCN5AQ14524 2016 aa15.54■□□□□ 0.08
TTC39A-216ENST00000530004 TET1Q8NFU7 2136 aa15.53■□□□□ 0.08
TTC39A-216ENST00000530004 PTPRJQ12913 1337 aa15.53■□□□□ 0.08
TTC39A-216ENST00000530004 GOLGA6L9A6NEM1 432 aa15.53■□□□□ 0.08
TTC39A-216ENST00000530004 ENPP3O14638 875 aa15.53■□□□□ 0.08
TTC39A-216ENST00000530004 RFX1P22670 979 aa15.53■□□□□ 0.08
TTC39A-216ENST00000530004 IKBKEQ14164 716 aa15.53■□□□□ 0.08
TTC39A-216ENST00000530004 SLC24A5Q71RS6 500 aa15.53■□□□□ 0.08
TTC39A-216ENST00000530004 APBB1IPQ7Z5R6 666 aaPredicted RBP15.53■□□□□ 0.08
TTC39A-216ENST00000530004 THNSL1Q8IYQ7 743 aa15.53■□□□□ 0.08
TTC39A-216ENST00000530004 FBXL13Q8NEE6 735 aa15.53■□□□□ 0.08
TTC39A-216ENST00000530004 SEMA4DQ92854 862 aa15.53■□□□□ 0.08
TTC39A-216ENST00000530004 FAM84AQ96KN4 292 aa15.53■□□□□ 0.08
TTC39A-216ENST00000530004 CGRRF1Q99675 332 aa15.53■□□□□ 0.08
TTC39A-216ENST00000530004 STK33Q9BYT3 514 aa15.53■□□□□ 0.08
TTC39A-216ENST00000530004 TRIM6Q9C030 488 aaPredicted RBP15.53■□□□□ 0.08
TTC39A-216ENST00000530004 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.53■□□□□ 0.08
TTC39A-216ENST00000530004 RAB20Q9NX57 234 aa15.53■□□□□ 0.08
TTC39A-216ENST00000530004 CPSF3Q9UKF6 684 aaKnown RBP15.53■□□□□ 0.08
TTC39A-216ENST00000530004 A0A0U1RQF3 1178 aa15.52■□□□□ 0.08
TTC39A-216ENST00000530004 C9IYK1 514 aa15.52■□□□□ 0.08
TTC39A-216ENST00000530004 IPO7O95373 1038 aaKnown RBP15.52■□□□□ 0.08
TTC39A-216ENST00000530004 STAT1P42224 750 aa15.52■□□□□ 0.08
TTC39A-216ENST00000530004 RAB27AP51159 221 aa15.52■□□□□ 0.08
TTC39A-216ENST00000530004 EPHB4P54760 987 aa15.52■□□□□ 0.08
TTC39A-216ENST00000530004 MAPK8IP2Q13387 824 aaPredicted RBP15.52■□□□□ 0.08
TTC39A-216ENST00000530004 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.52■□□□□ 0.08
TTC39A-216ENST00000530004 C15orf39Q6ZRI6 1047 aa15.52■□□□□ 0.08
TTC39A-216ENST00000530004 ARHGEF19Q8IW93 802 aa15.52■□□□□ 0.08
TTC39A-216ENST00000530004 CEP120Q8N960 986 aa15.52■□□□□ 0.08
TTC39A-216ENST00000530004 UBE2TQ9NPD8 197 aaPredicted RBP15.52■□□□□ 0.08
TTC39A-216ENST00000530004 C1orf112Q9NSG2 853 aa15.52■□□□□ 0.08
TTC39A-216ENST00000530004 REXO2Q9Y3B8 237 aaKnown RBP15.52■□□□□ 0.08
TTC39A-216ENST00000530004 IPPQ9Y573 584 aa15.52■□□□□ 0.08
TTC39A-216ENST00000530004 PCDHB2Q9Y5E7 798 aa15.52■□□□□ 0.08
TTC39A-216ENST00000530004 LTBP2Q14767 1821 aa15.52■□□□□ 0.07
TTC39A-216ENST00000530004 A0A0U1RQJ8 604 aa15.52■□□□□ 0.07
TTC39A-216ENST00000530004 ABHD14A-ACY1A0A1B0GW23 586 aa15.52■□□□□ 0.07
TTC39A-216ENST00000530004 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.52■□□□□ 0.07
TTC39A-216ENST00000530004 SSU72P8A0A1W2PR75 194 aa15.52■□□□□ 0.07
TTC39A-216ENST00000530004 EIF3CLB5ME19 914 aaKnown RBP15.52■□□□□ 0.07
TTC39A-216ENST00000530004 F8VZ95 297 aa15.52■□□□□ 0.07
TTC39A-216ENST00000530004 ZNF623O75123 536 aa15.52■□□□□ 0.07
TTC39A-216ENST00000530004 C4BPAP04003 597 aaKnown RBP15.52■□□□□ 0.07
TTC39A-216ENST00000530004 PNMA6AP0CW24 399 aaPredicted RBP15.52■□□□□ 0.07
TTC39A-216ENST00000530004 KIF11P52732 1056 aa15.52■□□□□ 0.07
TTC39A-216ENST00000530004 OSTNP61366 133 aa15.52■□□□□ 0.07
TTC39A-216ENST00000530004 KLHL30Q0D2K2 578 aa15.52■□□□□ 0.07
TTC39A-216ENST00000530004 DRAP1Q14919 205 aaPredicted RBP15.52■□□□□ 0.07
TTC39A-216ENST00000530004 ENOX2Q16206 610 aaKnown RBP15.52■□□□□ 0.07
TTC39A-216ENST00000530004 ARHGAP44Q17R89 818 aa15.52■□□□□ 0.07
TTC39A-216ENST00000530004 ZNF365Q70YC5 407 aa15.52■□□□□ 0.07
TTC39A-216ENST00000530004 IRF2BP2Q7Z5L9 587 aa15.52■□□□□ 0.07
TTC39A-216ENST00000530004 SMG8Q8ND04 991 aaKnown RBP15.52■□□□□ 0.07
TTC39A-216ENST00000530004 ATRIPQ8WXE1 791 aa15.52■□□□□ 0.07
TTC39A-216ENST00000530004 FAM212AQ96EL1 285 aa15.52■□□□□ 0.07
TTC39A-216ENST00000530004 EIF3CQ99613 913 aaKnown RBP15.52■□□□□ 0.07
TTC39A-216ENST00000530004 NXF3Q9H4D5 531 aaKnown RBP15.52■□□□□ 0.07
TTC39A-216ENST00000530004 HES2Q9Y543 173 aa15.52■□□□□ 0.07
TTC39A-216ENST00000530004 AKR1B10O60218 316 aa15.51■□□□□ 0.07
TTC39A-216ENST00000530004 FGBP02675 491 aa15.51■□□□□ 0.07
TTC39A-216ENST00000530004 SOX5P35711 763 aa15.51■□□□□ 0.07
TTC39A-216ENST00000530004 GRM5P41594 1212 aa15.51■□□□□ 0.07
TTC39A-216ENST00000530004 KRT83P78385 493 aa15.51■□□□□ 0.07
TTC39A-216ENST00000530004 FAM189BP81408 668 aa15.51■□□□□ 0.07
TTC39A-216ENST00000530004 BIRC3Q13489 604 aa15.51■□□□□ 0.07
TTC39A-216ENST00000530004 ZACNQ401N2 412 aa15.51■□□□□ 0.07
TTC39A-216ENST00000530004 TDRD10Q5VZ19 366 aaKnown RBP15.51■□□□□ 0.07
TTC39A-216ENST00000530004 PSRC1Q6PGN9 363 aaPredicted RBP15.51■□□□□ 0.07
TTC39A-216ENST00000530004 OTOP2Q7RTS6 562 aa15.51■□□□□ 0.07
TTC39A-216ENST00000530004 ECHDC2Q86YB7 292 aa15.51■□□□□ 0.07
TTC39A-216ENST00000530004 WDR49Q8IV35 697 aa15.51■□□□□ 0.07
TTC39A-216ENST00000530004 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.51■□□□□ 0.07
TTC39A-216ENST00000530004 GPR88Q9GZN0 384 aa15.51■□□□□ 0.07
TTC39A-216ENST00000530004 HAUS4Q9H6D7 363 aa15.51■□□□□ 0.07
TTC39A-216ENST00000530004 LZTFL1Q9NQ48 299 aa15.51■□□□□ 0.07
TTC39A-216ENST00000530004 KIF2AO00139 706 aaPredicted RBP15.5■□□□□ 0.07
TTC39A-216ENST00000530004 EFCAB14O75071 495 aa15.5■□□□□ 0.07
TTC39A-216ENST00000530004 GFPT2O94808 682 aa15.5■□□□□ 0.07
TTC39A-216ENST00000530004 BAIAP3O94812 1187 aa15.5■□□□□ 0.07
TTC39A-216ENST00000530004 STAG3L1P0CL83 205 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms