RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 ADPGKQ9BRR6 497 aa9.94□□□□□ -0.82
VPS11-203ENST00000529545 PRMT7Q9NVM4 692 aaPredicted RBP9.94□□□□□ -0.82
VPS11-203ENST00000529545 CACNG4Q9UBN1 327 aa9.94□□□□□ -0.82
VPS11-203ENST00000529545 SPTBN2O15020 2390 aa9.93□□□□□ -0.82
VPS11-203ENST00000529545 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.93□□□□□ -0.82
VPS11-203ENST00000529545 ZNF197O14709 1029 aa9.93□□□□□ -0.82
VPS11-203ENST00000529545 SLC30A4O14863 429 aa9.93□□□□□ -0.82
VPS11-203ENST00000529545 ADAM12O43184 909 aa9.93□□□□□ -0.82
VPS11-203ENST00000529545 FOXD2O60548 495 aaPredicted RBP9.93□□□□□ -0.82
VPS11-203ENST00000529545 SLITRK3O94933 977 aa9.93□□□□□ -0.82
VPS11-203ENST00000529545 LYPLA2O95372 231 aa9.93□□□□□ -0.82
VPS11-203ENST00000529545 RETP07949 1114 aa9.93□□□□□ -0.82
VPS11-203ENST00000529545 RHOP08100 348 aa9.93□□□□□ -0.82
VPS11-203ENST00000529545 TGM1P22735 817 aa9.93□□□□□ -0.82
VPS11-203ENST00000529545 CCR3P51677 355 aa9.93□□□□□ -0.82
VPS11-203ENST00000529545 SPIRE1Q08AE8 756 aa9.93□□□□□ -0.82
VPS11-203ENST00000529545 LPAL2Q16609 132 aa9.93□□□□□ -0.82
VPS11-203ENST00000529545 TANGO2Q6ICL3 276 aa9.93□□□□□ -0.82
VPS11-203ENST00000529545 PIK3AP1Q6ZUJ8 805 aa9.93□□□□□ -0.82
VPS11-203ENST00000529545 ANKS3Q6ZW76 656 aa9.93□□□□□ -0.82
VPS11-203ENST00000529545 DDX1Q92499 740 aaKnown RBP9.93□□□□□ -0.82
VPS11-203ENST00000529545 HAS1Q92839 578 aa9.93□□□□□ -0.82
VPS11-203ENST00000529545 EIF2AK1Q9BQI3 630 aaKnown RBP9.93□□□□□ -0.82
VPS11-203ENST00000529545 TRMT61BQ9BVS5 477 aaKnown RBP9.93□□□□□ -0.82
VPS11-203ENST00000529545 POLR3FQ9H1D9 316 aaPredicted RBP9.93□□□□□ -0.82
VPS11-203ENST00000529545 CHRDQ9H2X0 955 aa9.93□□□□□ -0.82
VPS11-203ENST00000529545 ZFP14Q9HCL3 533 aa9.93□□□□□ -0.82
VPS11-203ENST00000529545 PARD6AQ9NPB6 346 aa9.93□□□□□ -0.82
VPS11-203ENST00000529545 AVENQ9NQS1 362 aaPredicted RBP9.93□□□□□ -0.82
VPS11-203ENST00000529545 SNTG2Q9NY99 539 aa9.93□□□□□ -0.82
VPS11-203ENST00000529545 MTRRQ9UBK8 725 aa9.93□□□□□ -0.82
VPS11-203ENST00000529545 DAXXQ9UER7 740 aaPredicted RBP9.93□□□□□ -0.82
VPS11-203ENST00000529545 PCDHA12Q9UN75 941 aa9.93□□□□□ -0.82
VPS11-203ENST00000529545 KCNJ14Q9UNX9 436 aa9.93□□□□□ -0.82
VPS11-203ENST00000529545 CDY1Q9Y6F8 540 aa9.93□□□□□ -0.82
VPS11-203ENST00000529545 PRRG1O14668 218 aa9.92□□□□□ -0.82
VPS11-203ENST00000529545 CDKL5O76039 1030 aa9.92□□□□□ -0.82
VPS11-203ENST00000529545 RECQL4O94761 1208 aa9.92□□□□□ -0.82
VPS11-203ENST00000529545 B3GAT3O94766 335 aa9.92□□□□□ -0.82
VPS11-203ENST00000529545 FGFR3P22607 806 aa9.92□□□□□ -0.82
VPS11-203ENST00000529545 CXCL12P48061 93 aa9.92□□□□□ -0.82
VPS11-203ENST00000529545 FZD5Q13467 585 aa9.92□□□□□ -0.82
VPS11-203ENST00000529545 PRPF4BQ13523 1007 aaKnown RBP9.92□□□□□ -0.82
VPS11-203ENST00000529545 SIM2Q14190 667 aaPredicted RBP9.92□□□□□ -0.82
VPS11-203ENST00000529545 NPY5RQ15761 445 aa9.92□□□□□ -0.82
VPS11-203ENST00000529545 APBB1IPQ7Z5R6 666 aaPredicted RBP9.92□□□□□ -0.82
VPS11-203ENST00000529545 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.92□□□□□ -0.82
VPS11-203ENST00000529545 PACS2Q86VP3 889 aa9.92□□□□□ -0.82
VPS11-203ENST00000529545 ELMOD1Q8N336 334 aa9.92□□□□□ -0.82
VPS11-203ENST00000529545 FAM3CQ92520 227 aa9.92□□□□□ -0.82
VPS11-203ENST00000529545 ZNF274Q96GC6 653 aaPredicted RBP9.92□□□□□ -0.82
VPS11-203ENST00000529545 AIFM3Q96NN9 605 aa9.92□□□□□ -0.82
VPS11-203ENST00000529545 CORO1BQ9BR76 489 aa9.92□□□□□ -0.82
VPS11-203ENST00000529545 PLA2G2FQ9BZM2 168 aa9.92□□□□□ -0.82
VPS11-203ENST00000529545 C2orf40Q9H1Z8 148 aa9.92□□□□□ -0.82
VPS11-203ENST00000529545 LMAN1LQ9HAT1 526 aa9.92□□□□□ -0.82
VPS11-203ENST00000529545 BACE2Q9Y5Z0 518 aa9.92□□□□□ -0.82
VPS11-203ENST00000529545 CYP46A1Q9Y6A2 500 aa9.92□□□□□ -0.82
VPS11-203ENST00000529545 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.92□□□□□ -0.82
VPS11-203ENST00000529545 DNAH14Q0VDD8 3507 aa9.91□□□□□ -0.82
VPS11-203ENST00000529545 NOTCH4Q99466 2003 aa9.91□□□□□ -0.82
VPS11-203ENST00000529545 TMEM189-UBE2V1I3L0A0 370 aa9.91□□□□□ -0.82
VPS11-203ENST00000529545 PTGESO14684 152 aa9.91□□□□□ -0.82
VPS11-203ENST00000529545 USO1O60763 962 aaKnown RBP9.91□□□□□ -0.82
VPS11-203ENST00000529545 REC8O95072 547 aa9.91□□□□□ -0.82
VPS11-203ENST00000529545 XRCC6P12956 609 aaKnown RBP eCLIP9.91□□□□□ -0.82
VPS11-203ENST00000529545 CEBPBP17676 345 aa9.91□□□□□ -0.82
VPS11-203ENST00000529545 PSMC3P17980 439 aa9.91□□□□□ -0.82
VPS11-203ENST00000529545 CNR2P34972 360 aa9.91□□□□□ -0.82
VPS11-203ENST00000529545 RBM25P49756 843 aaKnown RBP9.91□□□□□ -0.82
VPS11-203ENST00000529545 RARRES1P49788 294 aa9.91□□□□□ -0.82
VPS11-203ENST00000529545 DMWDQ09019 674 aa9.91□□□□□ -0.82
VPS11-203ENST00000529545 STK3Q13188 491 aa9.91□□□□□ -0.82
VPS11-203ENST00000529545 GRM2Q14416 872 aa9.91□□□□□ -0.82
VPS11-203ENST00000529545 CSRP2Q16527 193 aa9.91□□□□□ -0.82
VPS11-203ENST00000529545 MAPK6Q16659 721 aa9.91□□□□□ -0.82
VPS11-203ENST00000529545 FAM187BQ17R55 369 aa9.91□□□□□ -0.82
VPS11-203ENST00000529545 SLC5A9Q2M3M2 681 aa9.91□□□□□ -0.82
VPS11-203ENST00000529545 CYP4A22Q5TCH4 519 aa9.91□□□□□ -0.82
VPS11-203ENST00000529545 IL31Q6EBC2 164 aa9.91□□□□□ -0.82
VPS11-203ENST00000529545 IQCEQ6IPM2 695 aa9.91□□□□□ -0.82
VPS11-203ENST00000529545 PDZD4Q76G19 769 aaPredicted RBP9.91□□□□□ -0.82
VPS11-203ENST00000529545 RUFY3Q7L099 469 aa9.91□□□□□ -0.82
VPS11-203ENST00000529545 MAEAQ7L5Y9 396 aa9.91□□□□□ -0.82
VPS11-203ENST00000529545 NOSTRINQ8IVI9 506 aa9.91□□□□□ -0.82
VPS11-203ENST00000529545 MCPH1Q8NEM0 835 aa9.91□□□□□ -0.82
VPS11-203ENST00000529545 ZNF461Q8TAF7 563 aa9.91□□□□□ -0.82
VPS11-203ENST00000529545 PIGOQ8TEQ8 1089 aa9.91□□□□□ -0.82
VPS11-203ENST00000529545 UROC1Q96N76 676 aa9.91□□□□□ -0.82
VPS11-203ENST00000529545 HSD17B14Q9BPX1 270 aa9.91□□□□□ -0.82
VPS11-203ENST00000529545 FZD8Q9H461 694 aa9.91□□□□□ -0.82
VPS11-203ENST00000529545 PDZD7Q9H5P4 517 aa9.91□□□□□ -0.82
VPS11-203ENST00000529545 BRMS1Q9HCU9 246 aa9.91□□□□□ -0.82
VPS11-203ENST00000529545 SEMA4GQ9NTN9 838 aa9.91□□□□□ -0.82
VPS11-203ENST00000529545 PLA2G2EQ9NZK7 142 aa9.91□□□□□ -0.82
VPS11-203ENST00000529545 GDAQ9Y2T3 454 aa9.91□□□□□ -0.82
VPS11-203ENST00000529545 PIAS3Q9Y6X2 628 aa9.91□□□□□ -0.82
VPS11-203ENST00000529545 RALGAPA1Q6GYQ0 2036 aa9.9□□□□□ -0.82
VPS11-203ENST00000529545 VWA8A3KMH1 1905 aa9.9□□□□□ -0.82
VPS11-203ENST00000529545 ARHGEF37A1IGU5 675 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms