RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 SBK1Q52WX2 424 aa8.55□□□□□ -1.04
CTNND1-220ENST00000529526 XKR3Q5GH77 459 aa8.55□□□□□ -1.04
CTNND1-220ENST00000529526 RASGRP2Q7LDG7 609 aa8.55□□□□□ -1.04
CTNND1-220ENST00000529526 SPATA21Q7Z572 469 aa8.55□□□□□ -1.04
CTNND1-220ENST00000529526 TTC39CQ8N584 583 aa8.55□□□□□ -1.04
CTNND1-220ENST00000529526 ACSF2Q96CM8 615 aaPredicted RBP8.55□□□□□ -1.04
CTNND1-220ENST00000529526 KIFC3Q9BVG8 833 aa8.55□□□□□ -1.04
CTNND1-220ENST00000529526 OSBPL1AQ9BXW6 950 aa8.55□□□□□ -1.04
CTNND1-220ENST00000529526 JMJD4Q9H9V9 463 aa8.55□□□□□ -1.04
CTNND1-220ENST00000529526 ZNRF3Q9ULT6 936 aa8.55□□□□□ -1.04
CTNND1-220ENST00000529526 AURKCQ9UQB9 309 aa8.55□□□□□ -1.04
CTNND1-220ENST00000529526 MYO3AQ8NEV4 1616 aa8.55□□□□□ -1.04
CTNND1-220ENST00000529526 WEE2P0C1S8 567 aa8.55□□□□□ -1.04
CTNND1-220ENST00000529526 FDPSP14324 419 aaKnown RBP8.55□□□□□ -1.04
CTNND1-220ENST00000529526 ATXN3P54252 364 aaPredicted RBP8.55□□□□□ -1.04
CTNND1-220ENST00000529526 NLRP11P59045 1033 aaKnown RBP8.55□□□□□ -1.04
CTNND1-220ENST00000529526 DEUP1Q05D60 604 aa8.55□□□□□ -1.04
CTNND1-220ENST00000529526 STAT4Q14765 748 aa8.55□□□□□ -1.04
CTNND1-220ENST00000529526 KYAT1Q16773 422 aa8.55□□□□□ -1.04
CTNND1-220ENST00000529526 CYP4A22Q5TCH4 519 aa8.55□□□□□ -1.04
CTNND1-220ENST00000529526 C9orf72Q96LT7 481 aa8.55□□□□□ -1.04
CTNND1-220ENST00000529526 AGBL1Q96MI9 1066 aa8.55□□□□□ -1.04
CTNND1-220ENST00000529526 RBM15Q96T37 977 aaKnown RBP eCLIP8.55□□□□□ -1.042e-7■■□□□ 13.5
CTNND1-220ENST00000529526 EPAS1Q99814 870 aa8.55□□□□□ -1.04
CTNND1-220ENST00000529526 CELF4Q9BZC1 486 aaKnown RBP8.55□□□□□ -1.04
CTNND1-220ENST00000529526 RAB6BQ9NRW1 208 aa8.55□□□□□ -1.04
CTNND1-220ENST00000529526 PCMTD2Q9NV79 361 aa8.55□□□□□ -1.04
CTNND1-220ENST00000529526 MAP3K20Q9NYL2 800 aaKnown RBP8.55□□□□□ -1.04
CTNND1-220ENST00000529526 ADGRB3O60242 1522 aa8.55□□□□□ -1.04
CTNND1-220ENST00000529526 ACTR2P61160 394 aa8.55□□□□□ -1.04
CTNND1-220ENST00000529526 C16orf87Q6PH81 154 aa8.55□□□□□ -1.04
CTNND1-220ENST00000529526 DDX53Q86TM3 631 aaKnown RBP8.55□□□□□ -1.04
CTNND1-220ENST00000529526 ZNF280CQ8ND82 737 aa8.55□□□□□ -1.04
CTNND1-220ENST00000529526 ICA1LQ8NDH6 482 aa8.55□□□□□ -1.04
CTNND1-220ENST00000529526 RIN2Q8WYP3 895 aaPredicted RBP8.55□□□□□ -1.04
CTNND1-220ENST00000529526 TMEM39BQ9GZU3 492 aa8.55□□□□□ -1.04
CTNND1-220ENST00000529526 EML4Q9HC35 981 aaKnown RBP8.55□□□□□ -1.04
CTNND1-220ENST00000529526 STOML1Q9UBI4 398 aa8.55□□□□□ -1.04
CTNND1-220ENST00000529526 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.55□□□□□ -1.04
CTNND1-220ENST00000529526 TEKT2Q9UIF3 430 aa8.55□□□□□ -1.04
CTNND1-220ENST00000529526 MORC2Q9Y6X9 1032 aaPredicted RBP8.55□□□□□ -1.04
CTNND1-220ENST00000529526 PNPLA6Q8IY17 1366 aa8.55□□□□□ -1.04
CTNND1-220ENST00000529526 ZC3H4Q9UPT8 1303 aaKnown RBP8.55□□□□□ -1.04
CTNND1-220ENST00000529526 PHF20L1A8MW92 1017 aa8.55□□□□□ -1.04
CTNND1-220ENST00000529526 RAD51CO43502 376 aa8.55□□□□□ -1.04
CTNND1-220ENST00000529526 UPP2O95045 317 aa8.55□□□□□ -1.04
CTNND1-220ENST00000529526 HSD17B4P51659 736 aa8.55□□□□□ -1.04
CTNND1-220ENST00000529526 RBP5P82980 135 aa8.55□□□□□ -1.04
CTNND1-220ENST00000529526 ANGEL2Q5VTE6 544 aaKnown RBP8.55□□□□□ -1.04
CTNND1-220ENST00000529526 LZICQ8WZA0 190 aa8.55□□□□□ -1.04
CTNND1-220ENST00000529526 NEU2Q9Y3R4 380 aa8.55□□□□□ -1.04
CTNND1-220ENST00000529526 SNX5Q9Y5X3 404 aa8.55□□□□□ -1.04
CTNND1-220ENST00000529526 ITIH6Q6UXX5 1313 aa8.55□□□□□ -1.04
CTNND1-220ENST00000529526 EEF2KO00418 725 aaKnown RBP8.55□□□□□ -1.04
CTNND1-220ENST00000529526 TLR2O60603 784 aa8.55□□□□□ -1.04
CTNND1-220ENST00000529526 GFAPP14136 432 aa8.55□□□□□ -1.04
CTNND1-220ENST00000529526 KLRK1P26718 216 aa8.55□□□□□ -1.04
CTNND1-220ENST00000529526 IFNA8P32881 189 aa8.55□□□□□ -1.04
CTNND1-220ENST00000529526 MDH1P40925 334 aaKnown RBP8.55□□□□□ -1.04
CTNND1-220ENST00000529526 CLEC17AQ6ZS10 378 aa8.55□□□□□ -1.04
CTNND1-220ENST00000529526 SLC25A41Q8N5S1 370 aa8.55□□□□□ -1.04
CTNND1-220ENST00000529526 TC2NQ8N9U0 490 aa8.55□□□□□ -1.04
CTNND1-220ENST00000529526 MRPL40Q9NQ50 206 aaKnown RBP8.55□□□□□ -1.04
CTNND1-220ENST00000529526 CHMP2BQ9UQN3 213 aa8.55□□□□□ -1.04
CTNND1-220ENST00000529526 ITM2BQ9Y287 266 aa8.55□□□□□ -1.04
CTNND1-220ENST00000529526 FDX1P10109 184 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 COMTP21964 271 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 TBCCQ15814 346 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 KCNV1Q6PIU1 500 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 ZNF467Q7Z7K2 595 aaPredicted RBP8.54□□□□□ -1.04
CTNND1-220ENST00000529526 ATPAF2Q8N5M1 289 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 CRAMP1Q96RY5 1269 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 TEX13BQ9BXU2 312 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 MAD2L2Q9UI95 211 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 FARP1Q9Y4F1 1045 aaPredicted RBP8.54□□□□□ -1.04
CTNND1-220ENST00000529526 UBE2Q2LH0YL09 131 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 MEFVO15553 781 aaPredicted RBP8.54□□□□□ -1.04
CTNND1-220ENST00000529526 TADA2AO75478 443 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 HLA-DRAP01903 254 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 NR3C2P08235 984 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 PGM1P36871 562 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 TRIM28Q13263 835 aaKnown RBP8.54□□□□□ -1.04
CTNND1-220ENST00000529526 PDAP1Q13442 181 aaKnown RBP8.54□□□□□ -1.04
CTNND1-220ENST00000529526 VEPH1Q14D04 833 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 SGSM1Q2NKQ1 1148 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 ZNF473Q8WTR7 871 aaKnown RBP8.54□□□□□ -1.04
CTNND1-220ENST00000529526 TIPINQ9BVW5 301 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 METTL5Q9NRN9 209 aaKnown RBP8.54□□□□□ -1.04
CTNND1-220ENST00000529526 ZC3H7BQ9UGR2 993 aaKnown RBP8.54□□□□□ -1.04
CTNND1-220ENST00000529526 SFMBT1Q9UHJ3 866 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 ZSCAN9O15535 394 aaPredicted RBP8.54□□□□□ -1.04
CTNND1-220ENST00000529526 CCDC22O60826 627 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 GYPCP04921 128 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 CSF1RP07333 972 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 BRD2P25440 801 aaKnown RBP8.54□□□□□ -1.04
CTNND1-220ENST00000529526 PTK2BQ14289 1009 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 NAB2Q15742 525 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 KIZQ2M2Z5 673 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 GOLGA7BQ2TAP0 167 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 NUP93Q8N1F7 819 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms