RNA–Protein interactions for RNA: ENST00000529133.5

CAPN1-217, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-217ENST00000529133 MRPL42Q9Y6G3 142 aaKnown RBP12.38□□□□□ -0.43
CAPN1-217ENST00000529133 LCHNA4D1U4 455 aa12.37□□□□□ -0.43
CAPN1-217ENST00000529133 CASTOR2A6NHX0 329 aa12.37□□□□□ -0.43
CAPN1-217ENST00000529133 AFPP02771 609 aaKnown RBP12.37□□□□□ -0.43
CAPN1-217ENST00000529133 PRKCSHP14314 528 aaPredicted RBP12.37□□□□□ -0.43
CAPN1-217ENST00000529133 LRPAP1P30533 357 aa12.37□□□□□ -0.43
CAPN1-217ENST00000529133 FMO5P49326 533 aa12.37□□□□□ -0.43
CAPN1-217ENST00000529133 MXI1P50539 228 aa12.37□□□□□ -0.43
CAPN1-217ENST00000529133 COPB1P53618 953 aaKnown RBP12.37□□□□□ -0.43
CAPN1-217ENST00000529133 MYL7Q01449 175 aa12.37□□□□□ -0.43
CAPN1-217ENST00000529133 KCNH2Q12809 1159 aa12.37□□□□□ -0.43
CAPN1-217ENST00000529133 ZACNQ401N2 412 aa12.37□□□□□ -0.43
CAPN1-217ENST00000529133 CBWD6Q4V339 395 aa12.37□□□□□ -0.43
CAPN1-217ENST00000529133 VWA3BQ502W6 1294 aa12.37□□□□□ -0.43
CAPN1-217ENST00000529133 CBWD3Q5JTY5 395 aa12.37□□□□□ -0.43
CAPN1-217ENST00000529133 CBWD5Q5RIA9 395 aa12.37□□□□□ -0.43
CAPN1-217ENST00000529133 TDRD10Q5VZ19 366 aaKnown RBP12.37□□□□□ -0.43
CAPN1-217ENST00000529133 SCARA3Q6AZY7 606 aa12.37□□□□□ -0.43
CAPN1-217ENST00000529133 SV2AQ7L0J3 742 aa12.37□□□□□ -0.43
CAPN1-217ENST00000529133 TRAPPC11Q7Z392 1133 aa12.37□□□□□ -0.43
CAPN1-217ENST00000529133 COLGALT2Q8IYK4 626 aa12.37□□□□□ -0.43
CAPN1-217ENST00000529133 C1orf127Q8N9H9 656 aa12.37□□□□□ -0.43
CAPN1-217ENST00000529133 ANKRD20A12PQ8NF67 263 aa12.37□□□□□ -0.43
CAPN1-217ENST00000529133 CXorf38Q8TB03 319 aa12.37□□□□□ -0.43
CAPN1-217ENST00000529133 FAM193BQ96PV7 902 aaPredicted RBP12.37□□□□□ -0.43
CAPN1-217ENST00000529133 CWH43Q9H720 699 aa12.37□□□□□ -0.43
CAPN1-217ENST00000529133 TMEM8AQ9HCN3 771 aa12.37□□□□□ -0.43
CAPN1-217ENST00000529133 DPP3Q9NY33 737 aa12.37□□□□□ -0.43
CAPN1-217ENST00000529133 DNAJB4Q9UDY4 337 aa12.37□□□□□ -0.43
CAPN1-217ENST00000529133 SIX4Q9UIU6 781 aa12.37□□□□□ -0.43
CAPN1-217ENST00000529133 ITGA11Q9UKX5 1188 aa12.37□□□□□ -0.43
CAPN1-217ENST00000529133 ANK1P16157 1881 aa12.37□□□□□ -0.43
CAPN1-217ENST00000529133 ANO9A1A5B4 782 aa12.36□□□□□ -0.43
CAPN1-217ENST00000529133 LRRC10BA6NIK2 292 aa12.36□□□□□ -0.43
CAPN1-217ENST00000529133 PPEF2O14830 753 aa12.36□□□□□ -0.43
CAPN1-217ENST00000529133 N4BP1O75113 896 aaKnown RBP12.36□□□□□ -0.43
CAPN1-217ENST00000529133 ZC3H11AO75152 810 aaKnown RBP eCLIP12.36□□□□□ -0.43
CAPN1-217ENST00000529133 VNN1O95497 513 aa12.36□□□□□ -0.43
CAPN1-217ENST00000529133 ITGB3P05106 788 aa12.36□□□□□ -0.43
CAPN1-217ENST00000529133 MYOGP15173 224 aa12.36□□□□□ -0.43
CAPN1-217ENST00000529133 POLR2BP30876 1174 aaKnown RBP12.36□□□□□ -0.43
CAPN1-217ENST00000529133 BIRC3Q13489 604 aa12.36□□□□□ -0.43
CAPN1-217ENST00000529133 C9orf57Q5W0N0 161 aa12.36□□□□□ -0.43
CAPN1-217ENST00000529133 KRT39Q6A163 491 aa12.36□□□□□ -0.43
CAPN1-217ENST00000529133 FIBCD1Q8N539 461 aa12.36□□□□□ -0.43
CAPN1-217ENST00000529133 TAS1R2Q8TE23 839 aa12.36□□□□□ -0.43
CAPN1-217ENST00000529133 UROC1Q96N76 676 aa12.36□□□□□ -0.43
CAPN1-217ENST00000529133 PAAF1Q9BRP4 392 aa12.36□□□□□ -0.43
CAPN1-217ENST00000529133 TMEM175Q9BSA9 504 aa12.36□□□□□ -0.43
CAPN1-217ENST00000529133 VPS16Q9H269 839 aa12.36□□□□□ -0.43
CAPN1-217ENST00000529133 NDST4Q9H3R1 872 aa12.36□□□□□ -0.43
CAPN1-217ENST00000529133 PCDHA11Q9Y5I1 949 aa12.36□□□□□ -0.43
CAPN1-217ENST00000529133 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.35□□□□□ -0.43
CAPN1-217ENST00000529133 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.35□□□□□ -0.43
CAPN1-217ENST00000529133 LGALS16A8MUM7 142 aa12.35□□□□□ -0.43
CAPN1-217ENST00000529133 PODXLO00592 558 aa12.35□□□□□ -0.43
CAPN1-217ENST00000529133 PIRO00625 290 aa12.35□□□□□ -0.43
CAPN1-217ENST00000529133 PMM2O15305 246 aa12.35□□□□□ -0.43
CAPN1-217ENST00000529133 PHACTR2O75167 634 aa12.35□□□□□ -0.43
CAPN1-217ENST00000529133 ARHGEF15O94989 841 aa12.35□□□□□ -0.43
CAPN1-217ENST00000529133 HLA-DRAP01903 254 aa12.35□□□□□ -0.43
CAPN1-217ENST00000529133 GALTP07902 379 aa12.35□□□□□ -0.43
CAPN1-217ENST00000529133 TPM2P07951 284 aa12.35□□□□□ -0.43
CAPN1-217ENST00000529133 KRT19P08727 400 aa12.35□□□□□ -0.43
CAPN1-217ENST00000529133 LINC00271P0C7V0 271 aa12.35□□□□□ -0.43
CAPN1-217ENST00000529133 LAG3P18627 525 aa12.35□□□□□ -0.43
CAPN1-217ENST00000529133 RPL9P32969 192 aaKnown RBP12.35□□□□□ -0.43
CAPN1-217ENST00000529133 PBX2P40425 430 aa12.35□□□□□ -0.43
CAPN1-217ENST00000529133 PIK3CAP42336 1068 aa12.35□□□□□ -0.43
CAPN1-217ENST00000529133 SLC11A1P49279 550 aa12.35□□□□□ -0.43
CAPN1-217ENST00000529133 CLCNKBP51801 687 aa12.35□□□□□ -0.43
CAPN1-217ENST00000529133 BCAR1P56945 870 aa12.35□□□□□ -0.43
CAPN1-217ENST00000529133 RBP5P82980 135 aa12.35□□□□□ -0.43
CAPN1-217ENST00000529133 FANCCQ00597 558 aa12.35□□□□□ -0.43
CAPN1-217ENST00000529133 UPP1Q16831 310 aa12.35□□□□□ -0.43
CAPN1-217ENST00000529133 RABGGTAQ92696 567 aa12.35□□□□□ -0.43
CAPN1-217ENST00000529133 DDX27Q96GQ7 796 aaKnown RBP12.35□□□□□ -0.43
CAPN1-217ENST00000529133 AGAP1Q9UPQ3 857 aa12.35□□□□□ -0.43
CAPN1-217ENST00000529133 YBX2Q9Y2T7 364 aaKnown RBP12.35□□□□□ -0.43
CAPN1-217ENST00000529133 PRG3Q9Y2Y8 225 aaPredicted RBP12.35□□□□□ -0.43
CAPN1-217ENST00000529133 COQ4Q9Y3A0 265 aa12.35□□□□□ -0.43
CAPN1-217ENST00000529133 MKI67P46013 3256 aaKnown RBP12.35□□□□□ -0.43
CAPN1-217ENST00000529133 PDCD11Q14690 1871 aaKnown RBP12.35□□□□□ -0.43
CAPN1-217ENST00000529133 FNDC1Q4ZHG4 1894 aaPredicted RBP12.35□□□□□ -0.43
CAPN1-217ENST00000529133 CITO14578 2027 aa12.34□□□□□ -0.43
CAPN1-217ENST00000529133 LINC01553A4QN01 128 aa12.34□□□□□ -0.43
CAPN1-217ENST00000529133 F8W810 466 aa12.34□□□□□ -0.43
CAPN1-217ENST00000529133 PES1O00541 588 aaKnown RBP12.34□□□□□ -0.43
CAPN1-217ENST00000529133 NRP1O14786 923 aa12.34□□□□□ -0.43
CAPN1-217ENST00000529133 P4HA2O15460 535 aa12.34□□□□□ -0.43
CAPN1-217ENST00000529133 KIF4AO95239 1232 aa12.34□□□□□ -0.43
CAPN1-217ENST00000529133 SERPINC1P01008 464 aa12.34□□□□□ -0.43
CAPN1-217ENST00000529133 IGFBP6P24592 240 aaPredicted RBP12.34□□□□□ -0.43
CAPN1-217ENST00000529133 PBX3P40426 434 aa12.34□□□□□ -0.43
CAPN1-217ENST00000529133 OR1G1P47890 313 aa12.34□□□□□ -0.43
CAPN1-217ENST00000529133 MYL6P60660 151 aa12.34□□□□□ -0.43
CAPN1-217ENST00000529133 TRPC3Q13507 836 aa12.34□□□□□ -0.43
CAPN1-217ENST00000529133 NCOA4Q13772 614 aa12.34□□□□□ -0.43
CAPN1-217ENST00000529133 RAB30Q15771 203 aa12.34□□□□□ -0.43
CAPN1-217ENST00000529133 EPC2Q52LR7 807 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms