RNA–Protein interactions for RNA: ENST00000528999.5

PUF60-213, Transcript of poly(U) binding splicing factor 60, human

TSL 3

Gene PUF60, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUF60-213	ENST00000528999	SLMAP	Q14BN4	828 aa		11.43	□□□□□ -0.58
PUF60-213	ENST00000528999	ZNF484	Q5JVG2	852 aa		11.43	□□□□□ -0.58
PUF60-213	ENST00000528999	CCDC62	Q6P9F0	684 aa		11.43	□□□□□ -0.58
PUF60-213	ENST00000528999	ARMC9	Q7Z3E5	817 aa		11.43	□□□□□ -0.58
PUF60-213	ENST00000528999	TMC3	Q7Z5M5	1100 aa		11.43	□□□□□ -0.58
PUF60-213	ENST00000528999	JAML	Q86YT9	394 aa		11.43	□□□□□ -0.58
PUF60-213	ENST00000528999	PRELID2	Q8N945	189 aa		11.43	□□□□□ -0.58
PUF60-213	ENST00000528999	RIN2	Q8WYP3	895 aa	Predicted RBP	11.43	□□□□□ -0.58
PUF60-213	ENST00000528999	MMP19	Q99542	508 aa		11.43	□□□□□ -0.58
PUF60-213	ENST00000528999	ACO2	Q99798	780 aa	Known RBP	11.43	□□□□□ -0.58
PUF60-213	ENST00000528999	TMEM109	Q9BVC6	243 aa		11.43	□□□□□ -0.58
PUF60-213	ENST00000528999	ZDHHC18	Q9NUE0	388 aa		11.43	□□□□□ -0.58
PUF60-213	ENST00000528999	RBPJL	Q9UBG7	517 aa		11.43	□□□□□ -0.58
PUF60-213	ENST00000528999	MTRF1L	Q9UGC7	380 aa	Known RBP	11.43	□□□□□ -0.58
PUF60-213	ENST00000528999	FZD1	Q9UP38	647 aa		11.43	□□□□□ -0.58
PUF60-213	ENST00000528999	PLAA	Q9Y263	795 aa		11.43	□□□□□ -0.58
PUF60-213	ENST00000528999	SLC45A1	Q9Y2W3	748 aa		11.43	□□□□□ -0.58
PUF60-213	ENST00000528999	TELO2	Q9Y4R8	837 aa		11.43	□□□□□ -0.58
PUF60-213	ENST00000528999	NFS1	Q9Y697	457 aa		11.43	□□□□□ -0.58
PUF60-213	ENST00000528999	KIAA1217	Q5T5P2	1943 aa		11.43	□□□□□ -0.58
PUF60-213	ENST00000528999	ERICH4	A6NGS2	130 aa		11.42	□□□□□ -0.58
PUF60-213	ENST00000528999	NOP56	O00567	594 aa	Known RBP	11.42	□□□□□ -0.58
PUF60-213	ENST00000528999	ACKR2	O00590	384 aa		11.42	□□□□□ -0.58
PUF60-213	ENST00000528999	MAGEB2	O15479	319 aa		11.42	□□□□□ -0.58
PUF60-213	ENST00000528999	PSTPIP1	O43586	416 aa		11.42	□□□□□ -0.58
PUF60-213	ENST00000528999	B4GALT4	O60513	344 aa		11.42	□□□□□ -0.58
PUF60-213	ENST00000528999	DDN	O94850	711 aa	Predicted RBP	11.42	□□□□□ -0.58
PUF60-213	ENST00000528999	PROSC	O94903	275 aa		11.42	□□□□□ -0.58
PUF60-213	ENST00000528999	IL18RAP	O95256	599 aa		11.42	□□□□□ -0.58
PUF60-213	ENST00000528999	ASS1	P00966	412 aa	Known RBP	11.42	□□□□□ -0.58
PUF60-213	ENST00000528999	NUDT17	P0C025	328 aa		11.42	□□□□□ -0.58
PUF60-213	ENST00000528999	PYGM	P11217	842 aa		11.42	□□□□□ -0.58
PUF60-213	ENST00000528999	PROZ	P22891	400 aa		11.42	□□□□□ -0.58
PUF60-213	ENST00000528999	ZNF132	P52740	706 aa		11.42	□□□□□ -0.58
PUF60-213	ENST00000528999	LAMTOR4	Q0VGL1	99 aa		11.42	□□□□□ -0.58
PUF60-213	ENST00000528999	FSTL1	Q12841	308 aa		11.42	□□□□□ -0.58
PUF60-213	ENST00000528999	LAMC2	Q13753	1193 aa		11.42	□□□□□ -0.58
PUF60-213	ENST00000528999	FAM187B	Q17R55	369 aa		11.42	□□□□□ -0.58
PUF60-213	ENST00000528999	TTMP	Q5BVD1	217 aa		11.42	□□□□□ -0.58
PUF60-213	ENST00000528999	LRRC38	Q5VT99	294 aa		11.42	□□□□□ -0.58
PUF60-213	ENST00000528999	PLEKHA7	Q6IQ23	1121 aa		11.42	□□□□□ -0.58
PUF60-213	ENST00000528999	DPY19L2	Q6NUT2	758 aa		11.42	□□□□□ -0.58
PUF60-213	ENST00000528999	LRRC31	Q6UY01	552 aa		11.42	□□□□□ -0.58
PUF60-213	ENST00000528999	SPATS2	Q86XZ4	545 aa	Known RBP	11.42	□□□□□ -0.58
PUF60-213	ENST00000528999	IFNLR1	Q8IU57	520 aa	Predicted RBP	11.42	□□□□□ -0.58
PUF60-213	ENST00000528999	DHX37	Q8IY37	1157 aa	Known RBP	11.42	□□□□□ -0.58
PUF60-213	ENST00000528999	UBR7	Q8N806	425 aa		11.42	□□□□□ -0.58
PUF60-213	ENST00000528999	C3orf20	Q8ND61	904 aa		11.42	□□□□□ -0.58
PUF60-213	ENST00000528999	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	11.42	□□□□□ -0.58
PUF60-213	ENST00000528999	ZNF526	Q8TF50	670 aa	Predicted RBP	11.42	□□□□□ -0.58
PUF60-213	ENST00000528999	GRK7	Q8WTQ7	553 aa		11.42	□□□□□ -0.58
PUF60-213	ENST00000528999	KRT35	Q92764	455 aa		11.42	□□□□□ -0.58
PUF60-213	ENST00000528999	GLG1	Q92896	1179 aa		11.42	□□□□□ -0.58
PUF60-213	ENST00000528999	ARL8A	Q96BM9	186 aa		11.42	□□□□□ -0.58
PUF60-213	ENST00000528999	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.42	□□□□□ -0.58
PUF60-213	ENST00000528999	FMO2	Q99518	471 aa		11.42	□□□□□ -0.58
PUF60-213	ENST00000528999	HAPLN2	Q9GZV7	340 aa		11.42	□□□□□ -0.58
PUF60-213	ENST00000528999	FZD8	Q9H461	694 aa		11.42	□□□□□ -0.58
PUF60-213	ENST00000528999	SPON1	Q9HCB6	807 aa		11.42	□□□□□ -0.58
PUF60-213	ENST00000528999	PARVA	Q9NVD7	372 aa		11.42	□□□□□ -0.58
PUF60-213	ENST00000528999	CPSF3	Q9UKF6	684 aa	Known RBP	11.42	□□□□□ -0.58
PUF60-213	ENST00000528999	ZHX1	Q9UKY1	873 aa	Predicted RBP	11.42	□□□□□ -0.58
PUF60-213	ENST00000528999	PNMA3	Q9UL41	463 aa		11.42	□□□□□ -0.58
PUF60-213	ENST00000528999	PCDHB4	Q9Y5E5	795 aa		11.42	□□□□□ -0.58
PUF60-213	ENST00000528999	WDR90	Q96KV7	1748 aa		11.42	□□□□□ -0.58
PUF60-213	ENST00000528999	WDR81	Q562E7	1941 aa		11.42	□□□□□ -0.58
PUF60-213	ENST00000528999	PASK	Q96RG2	1323 aa		11.41	□□□□□ -0.58
PUF60-213	ENST00000528999	TMEM110-MUSTN1	A8MSY1	372 aa		11.41	□□□□□ -0.58
PUF60-213	ENST00000528999	NDC80	O14777	642 aa		11.41	□□□□□ -0.58
PUF60-213	ENST00000528999	EIF3H	O15372	352 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
PUF60-213	ENST00000528999	THAP12	O43422	761 aa		11.41	□□□□□ -0.58
PUF60-213	ENST00000528999	FAM189A1	O60320	539 aa		11.41	□□□□□ -0.58
PUF60-213	ENST00000528999	PRKCB	P05771	671 aa		11.41	□□□□□ -0.58
PUF60-213	ENST00000528999	CALB1	P05937	261 aa		11.41	□□□□□ -0.58
PUF60-213	ENST00000528999	ITIH2	P19823	946 aa		11.41	□□□□□ -0.58
PUF60-213	ENST00000528999	CDR1	P51861	262 aa		11.41	□□□□□ -0.58
PUF60-213	ENST00000528999	NOMO3	P69849	1222 aa		11.41	□□□□□ -0.58
PUF60-213	ENST00000528999	NOP14	P78316	857 aa	Known RBP	11.41	□□□□□ -0.58
PUF60-213	ENST00000528999	CCNA1	P78396	465 aa		11.41	□□□□□ -0.58
PUF60-213	ENST00000528999	TNFAIP2	Q03169	654 aa		11.41	□□□□□ -0.58
PUF60-213	ENST00000528999	LMNB2	Q03252	620 aa		11.41	□□□□□ -0.58
PUF60-213	ENST00000528999	DHX9	Q08211	1270 aa	Known RBP	11.41	□□□□□ -0.58
PUF60-213	ENST00000528999	ZNF211	Q13398	564 aa	Predicted RBP	11.41	□□□□□ -0.58
PUF60-213	ENST00000528999	MOGS	Q13724	837 aa		11.41	□□□□□ -0.58
PUF60-213	ENST00000528999	PRKG1	Q13976	671 aa		11.41	□□□□□ -0.58
PUF60-213	ENST00000528999	TTLL4	Q14679	1199 aa		11.41	□□□□□ -0.58
PUF60-213	ENST00000528999	PLCB4	Q15147	1175 aa		11.41	□□□□□ -0.58
PUF60-213	ENST00000528999	TRADD	Q15628	312 aa		11.41	□□□□□ -0.58
PUF60-213	ENST00000528999	CEP85L	Q5SZL2	805 aa		11.41	□□□□□ -0.58
PUF60-213	ENST00000528999	CCDC137	Q6PK04	289 aa	Known RBP	11.41	□□□□□ -0.58
PUF60-213	ENST00000528999	MPZL3	Q6UWV2	235 aa		11.41	□□□□□ -0.58
PUF60-213	ENST00000528999	CEP128	Q6ZU80	1094 aa		11.41	□□□□□ -0.58
PUF60-213	ENST00000528999	MON1B	Q7L1V2	547 aa		11.41	□□□□□ -0.58
PUF60-213	ENST00000528999	ZNF467	Q7Z7K2	595 aa	Predicted RBP	11.41	□□□□□ -0.58
PUF60-213	ENST00000528999	HOOK3	Q86VS8	718 aa		11.41	□□□□□ -0.58
PUF60-213	ENST00000528999	RHOT1	Q8IXI2	618 aa		11.41	□□□□□ -0.58
PUF60-213	ENST00000528999	RBBP8NL	Q8NC74	664 aa	Predicted RBP	11.41	□□□□□ -0.58
PUF60-213	ENST00000528999	BBOF1	Q8ND07	529 aa		11.41	□□□□□ -0.58
PUF60-213	ENST00000528999	OTUD5	Q96G74	571 aa		11.41	□□□□□ -0.58
PUF60-213	ENST00000528999	ZBTB45	Q96K62	511 aa	Predicted RBP	11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms