RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 RNF207Q6ZRF8 634 aa18.95■□□□□ 0.62
LTBP3-210ENST00000528516 KLHL23Q8NBE8 558 aa18.95■□□□□ 0.62
LTBP3-210ENST00000528516 RASA4BC9J798 803 aa18.95■□□□□ 0.62
LTBP3-210ENST00000528516 hCG_1984214I3L0E3 225 aa18.95■□□□□ 0.62
LTBP3-210ENST00000528516 MAP3K7O43318 606 aa18.95■□□□□ 0.62
LTBP3-210ENST00000528516 RASA4O43374 803 aa18.95■□□□□ 0.62
LTBP3-210ENST00000528516 PEX11AO75192 247 aa18.95■□□□□ 0.62
LTBP3-210ENST00000528516 CALCAP01258 141 aa18.95■□□□□ 0.62
LTBP3-210ENST00000528516 SOX5P35711 763 aa18.95■□□□□ 0.62
LTBP3-210ENST00000528516 FYB2Q5VWT5 728 aa18.95■□□□□ 0.62
LTBP3-210ENST00000528516 ZNF713Q8N859 430 aaPredicted RBP18.95■□□□□ 0.62
LTBP3-210ENST00000528516 MASTLQ96GX5 879 aa18.95■□□□□ 0.62
LTBP3-210ENST00000528516 KCNMB3Q9NPA1 279 aa18.95■□□□□ 0.62
LTBP3-210ENST00000528516 BLOC1S4Q9NUP1 217 aa18.95■□□□□ 0.62
LTBP3-210ENST00000528516 RHBDL2Q9NX52 303 aa18.95■□□□□ 0.62
LTBP3-210ENST00000528516 ABCA3Q99758 1704 aa18.95■□□□□ 0.62
LTBP3-210ENST00000528516 PITPNM2Q9BZ72 1349 aa18.95■□□□□ 0.62
LTBP3-210ENST00000528516 TISP43B9A030 160 aa18.94■□□□□ 0.62
LTBP3-210ENST00000528516 FOXN3O00409 490 aaPredicted RBP18.94■□□□□ 0.62
LTBP3-210ENST00000528516 OPHN1O60890 802 aa18.94■□□□□ 0.62
LTBP3-210ENST00000528516 PYGBP11216 843 aa18.94■□□□□ 0.62
LTBP3-210ENST00000528516 AP3B2Q13367 1082 aa18.94■□□□□ 0.62
LTBP3-210ENST00000528516 PODNQ7Z5L7 613 aa18.94■□□□□ 0.62
LTBP3-210ENST00000528516 FAM149B1Q96BN6 582 aa18.94■□□□□ 0.62
LTBP3-210ENST00000528516 THAP2Q9H0W7 228 aa18.94■□□□□ 0.62
LTBP3-210ENST00000528516 SAYSD1Q9NPB0 183 aa18.94■□□□□ 0.62
LTBP3-210ENST00000528516 DBN1Q16643 649 aa18.94■□□□□ 0.62
LTBP3-210ENST00000528516 GALNTL6Q49A17 601 aa18.94■□□□□ 0.62
LTBP3-210ENST00000528516 MTHFD1LQ6UB35 978 aa18.94■□□□□ 0.62
LTBP3-210ENST00000528516 PPP4R3CPQ6ZMV5 832 aa18.94■□□□□ 0.62
LTBP3-210ENST00000528516 EPM2AIP1Q7L775 607 aaPredicted RBP18.94■□□□□ 0.62
LTBP3-210ENST00000528516 CCNJLQ8IV13 435 aa18.94■□□□□ 0.62
LTBP3-210ENST00000528516 PDCD7Q8N8D1 485 aaKnown RBP18.94■□□□□ 0.62
LTBP3-210ENST00000528516 RNF34Q969K3 372 aa18.94■□□□□ 0.62
LTBP3-210ENST00000528516 CDC42EP4Q9H3Q1 356 aaKnown RBP18.94■□□□□ 0.62
LTBP3-210ENST00000528516 LRRC4BQ9NT99 713 aa18.94■□□□□ 0.62
LTBP3-210ENST00000528516 NMRK1Q9NWW6 199 aa18.94■□□□□ 0.62
LTBP3-210ENST00000528516 ZHX2Q9Y6X8 837 aa18.94■□□□□ 0.62
LTBP3-210ENST00000528516 SPEF2Q9C093 1822 aa18.94■□□□□ 0.62
LTBP3-210ENST00000528516 CAPN9O14815 690 aa18.94■□□□□ 0.62
LTBP3-210ENST00000528516 CHRNA3P32297 505 aa18.94■□□□□ 0.62
LTBP3-210ENST00000528516 FMO5P49326 533 aa18.94■□□□□ 0.62
LTBP3-210ENST00000528516 SCNN1BP51168 640 aa18.94■□□□□ 0.62
LTBP3-210ENST00000528516 CASP5P51878 434 aa18.94■□□□□ 0.62
LTBP3-210ENST00000528516 RFFLQ8WZ73 363 aa18.94■□□□□ 0.62
LTBP3-210ENST00000528516 ZFP69BQ9UJL9 534 aa18.94■□□□□ 0.62
LTBP3-210ENST00000528516 RPTORQ8N122 1335 aa18.94■□□□□ 0.62
LTBP3-210ENST00000528516 DCTN3O75935 186 aa18.94■□□□□ 0.62
LTBP3-210ENST00000528516 IRGCQ6NXR0 463 aa18.94■□□□□ 0.62
LTBP3-210ENST00000528516 BTNL9Q6UXG8 535 aa18.94■□□□□ 0.62
LTBP3-210ENST00000528516 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.94■□□□□ 0.629e-14■□□□□ 10.7
LTBP3-210ENST00000528516 MCF2L2Q86YR7 1114 aa18.94■□□□□ 0.62
LTBP3-210ENST00000528516 CKAP2Q8WWK9 683 aa18.94■□□□□ 0.62
LTBP3-210ENST00000528516 ATG4AQ8WYN0 398 aa18.94■□□□□ 0.62
LTBP3-210ENST00000528516 PRMT6Q96LA8 375 aaPredicted RBP18.94■□□□□ 0.62
LTBP3-210ENST00000528516 LRRC42Q9Y546 428 aa18.94■□□□□ 0.62
LTBP3-210ENST00000528516 MSH4O15457 936 aa18.93■□□□□ 0.62
LTBP3-210ENST00000528516 PHF2O75151 1096 aa18.93■□□□□ 0.62
LTBP3-210ENST00000528516 RARGP13631 454 aa18.93■□□□□ 0.62
LTBP3-210ENST00000528516 GSTT1P30711 240 aa18.93■□□□□ 0.62
LTBP3-210ENST00000528516 TBC1D25Q3MII6 688 aa18.93■□□□□ 0.62
LTBP3-210ENST00000528516 ZC3H12AQ5D1E8 599 aaKnown RBP18.93■□□□□ 0.62
LTBP3-210ENST00000528516 SCG3Q8WXD2 468 aaKnown RBP18.93■□□□□ 0.62
LTBP3-210ENST00000528516 DCLRE1BQ9H816 532 aa18.93■□□□□ 0.62
LTBP3-210ENST00000528516 ZDHHC18Q9NUE0 388 aa18.93■□□□□ 0.62
LTBP3-210ENST00000528516 CNOT7Q9UIV1 285 aaKnown RBP18.93■□□□□ 0.62
LTBP3-210ENST00000528516 LRCH1Q9Y2L9 728 aa18.93■□□□□ 0.62
LTBP3-210ENST00000528516 ALG6Q9Y672 507 aa18.93■□□□□ 0.62
LTBP3-210ENST00000528516 STAM2O75886 525 aa18.93■□□□□ 0.62
LTBP3-210ENST00000528516 LBRQ14739 615 aaKnown RBP18.93■□□□□ 0.62
LTBP3-210ENST00000528516 TMEM143Q96AN5 459 aa18.93■□□□□ 0.62
LTBP3-210ENST00000528516 MMTAG2Q9BU76 263 aaKnown RBP18.93■□□□□ 0.62
LTBP3-210ENST00000528516 TMEM206Q9H813 350 aa18.93■□□□□ 0.62
LTBP3-210ENST00000528516 TOGARAM1Q9Y4F4 1720 aa18.93■□□□□ 0.62
LTBP3-210ENST00000528516 DEUP1Q05D60 604 aa18.93■□□□□ 0.62
LTBP3-210ENST00000528516 KRT81Q14533 505 aa18.93■□□□□ 0.62
LTBP3-210ENST00000528516 RFX6Q8HWS3 928 aa18.93■□□□□ 0.62
LTBP3-210ENST00000528516 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.93■□□□□ 0.621e-8■■■■■ 81.8
LTBP3-210ENST00000528516 ATP6V0A1Q93050 837 aa18.93■□□□□ 0.62
LTBP3-210ENST00000528516 CYTH2Q99418 400 aa18.93■□□□□ 0.62
LTBP3-210ENST00000528516 KLF6Q99612 283 aaPredicted RBP18.93■□□□□ 0.62
LTBP3-210ENST00000528516 NGRNQ9NPE2 291 aaKnown RBP18.93■□□□□ 0.62
LTBP3-210ENST00000528516 PFASO15067 1338 aa18.92■□□□□ 0.62
LTBP3-210ENST00000528516 LMNAP02545 664 aaKnown RBP18.92■□□□□ 0.62
LTBP3-210ENST00000528516 QARSP47897 775 aaKnown RBP18.92■□□□□ 0.62
LTBP3-210ENST00000528516 PPP6R3Q5H9R7 873 aaPredicted RBP18.92■□□□□ 0.62
LTBP3-210ENST00000528516 IRF2BP2Q7Z5L9 587 aa18.92■□□□□ 0.62
LTBP3-210ENST00000528516 RASGEF1CQ8N431 466 aa18.92■□□□□ 0.62
LTBP3-210ENST00000528516 GINM1Q9NU53 330 aa18.92■□□□□ 0.62
LTBP3-210ENST00000528516 DDX3XO00571 662 aaKnown RBP eCLIP18.92■□□□□ 0.624e-41■■□□□ 12.4
LTBP3-210ENST00000528516 MAP3K6O95382 1288 aa18.92■□□□□ 0.62
LTBP3-210ENST00000528516 GJB6O95452 261 aa18.92■□□□□ 0.62
LTBP3-210ENST00000528516 ACADSP16219 412 aa18.92■□□□□ 0.62
LTBP3-210ENST00000528516 DNAJC24Q6P3W2 148 aa18.92■□□□□ 0.62
LTBP3-210ENST00000528516 APLFQ8IW19 511 aaPredicted RBP18.92■□□□□ 0.62
LTBP3-210ENST00000528516 DCLK2Q8N568 766 aa18.92■□□□□ 0.62
LTBP3-210ENST00000528516 ABTB1Q969K4 478 aaPredicted RBP18.92■□□□□ 0.62
LTBP3-210ENST00000528516 MSTO1Q9BUK6 570 aa18.92■□□□□ 0.62
LTBP3-210ENST00000528516 CARD9Q9H257 536 aa18.92■□□□□ 0.62
LTBP3-210ENST00000528516 STK24Q9Y6E0 443 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms