RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 TBC1D4O60343 1298 aa16.99■□□□□ 0.31
CLNS1A-210ENST00000528364 SEC24AO95486 1093 aa16.99■□□□□ 0.31
CLNS1A-210ENST00000528364 PLA2G4BP0C869 781 aa16.99■□□□□ 0.31
CLNS1A-210ENST00000528364 PLS3P13797 630 aa16.99■□□□□ 0.31
CLNS1A-210ENST00000528364 SLC12A3P55017 1021 aa16.99■□□□□ 0.31
CLNS1A-210ENST00000528364 ROR1Q01973 937 aa16.99■□□□□ 0.31
CLNS1A-210ENST00000528364 SPAG1Q07617 926 aa16.99■□□□□ 0.31
CLNS1A-210ENST00000528364 SNW1Q13573 536 aaKnown RBP16.99■□□□□ 0.31
CLNS1A-210ENST00000528364 SLC5A9Q2M3M2 681 aa16.99■□□□□ 0.31
CLNS1A-210ENST00000528364 PABPC1LQ4VXU2 614 aaKnown RBP16.99■□□□□ 0.31
CLNS1A-210ENST00000528364 ARSHQ5FYA8 562 aa16.99■□□□□ 0.31
CLNS1A-210ENST00000528364 LRRC15Q8TF66 581 aa16.99■□□□□ 0.31
CLNS1A-210ENST00000528364 SPIRE2Q8WWL2 714 aa16.99■□□□□ 0.31
CLNS1A-210ENST00000528364 MCRS1Q96EZ8 462 aa16.99■□□□□ 0.31
CLNS1A-210ENST00000528364 C17orf75Q9HAS0 396 aa16.99■□□□□ 0.31
CLNS1A-210ENST00000528364 SLC38A7Q9NVC3 462 aa16.99■□□□□ 0.31
CLNS1A-210ENST00000528364 CNTN3Q9P232 1028 aa16.99■□□□□ 0.31
CLNS1A-210ENST00000528364 ANKFY1Q9P2R3 1169 aa16.99■□□□□ 0.31
CLNS1A-210ENST00000528364 COL4A3Q01955 1670 aa16.99■□□□□ 0.31
CLNS1A-210ENST00000528364 EP300Q09472 2414 aaPredicted RBP16.99■□□□□ 0.31
CLNS1A-210ENST00000528364 CITO14578 2027 aa16.99■□□□□ 0.31
CLNS1A-210ENST00000528364 MYH15Q9Y2K3 1946 aa16.98■□□□□ 0.31
CLNS1A-210ENST00000528364 WDR27A2RRH5 827 aa16.98■□□□□ 0.31
CLNS1A-210ENST00000528364 ABLIM3O94929 683 aa16.98■□□□□ 0.31
CLNS1A-210ENST00000528364 MAPTP10636 758 aaKnown RBP16.98■□□□□ 0.31
CLNS1A-210ENST00000528364 GLULP15104 373 aa16.98■□□□□ 0.31
CLNS1A-210ENST00000528364 MRPL58Q14197 206 aaKnown RBP16.98■□□□□ 0.31
CLNS1A-210ENST00000528364 SLC8B1Q6J4K2 584 aa16.98■□□□□ 0.31
CLNS1A-210ENST00000528364 PHLDB3Q6NSJ2 640 aa16.98■□□□□ 0.31
CLNS1A-210ENST00000528364 NPAS3Q8IXF0 933 aa16.98■□□□□ 0.31
CLNS1A-210ENST00000528364 ZNF461Q8TAF7 563 aa16.98■□□□□ 0.31
CLNS1A-210ENST00000528364 NKD2Q969F2 451 aaPredicted RBP16.98■□□□□ 0.31
CLNS1A-210ENST00000528364 PLA2G2FQ9BZM2 168 aa16.98■□□□□ 0.31
CLNS1A-210ENST00000528364 DLGAP2Q9P1A6 1054 aa16.98■□□□□ 0.31
CLNS1A-210ENST00000528364 FBXL5Q9UKA1 691 aa16.98■□□□□ 0.31
CLNS1A-210ENST00000528364 MRPS23Q9Y3D9 190 aaKnown RBP16.98■□□□□ 0.31
CLNS1A-210ENST00000528364 SIT1Q9Y3P8 196 aa16.98■□□□□ 0.31
CLNS1A-210ENST00000528364 MYH11P35749 1972 aa16.98■□□□□ 0.31
CLNS1A-210ENST00000528364 H3BQV1 296 aa16.97■□□□□ 0.31
CLNS1A-210ENST00000528364 NRG2O14511 850 aaPredicted RBP16.97■□□□□ 0.31
CLNS1A-210ENST00000528364 TOM1L1O75674 476 aa16.97■□□□□ 0.31
CLNS1A-210ENST00000528364 RHOP08100 348 aa16.97■□□□□ 0.31
CLNS1A-210ENST00000528364 POU2F2P09086 479 aa16.97■□□□□ 0.31
CLNS1A-210ENST00000528364 RPL9P32969 192 aaKnown RBP16.97■□□□□ 0.31
CLNS1A-210ENST00000528364 STRN3Q13033 797 aa16.97■□□□□ 0.31
CLNS1A-210ENST00000528364 DHX8Q14562 1220 aaKnown RBP16.97■□□□□ 0.31
CLNS1A-210ENST00000528364 TMEM119Q4V9L6 283 aa16.97■□□□□ 0.31
CLNS1A-210ENST00000528364 TIPINQ9BVW5 301 aa16.97■□□□□ 0.31
CLNS1A-210ENST00000528364 TUBGCP4Q9UGJ1 667 aa16.97■□□□□ 0.31
CLNS1A-210ENST00000528364 MTF2Q9Y483 593 aaPredicted RBP16.97■□□□□ 0.31
CLNS1A-210ENST00000528364 NUB1Q9Y5A7 615 aa16.97■□□□□ 0.31
CLNS1A-210ENST00000528364 ARHGEF37A1IGU5 675 aa16.96■□□□□ 0.31
CLNS1A-210ENST00000528364 CXCL8P10145 99 aa16.96■□□□□ 0.31
CLNS1A-210ENST00000528364 ELF1P32519 619 aa16.96■□□□□ 0.31
CLNS1A-210ENST00000528364 SMTNP53814 917 aa16.96■□□□□ 0.31
CLNS1A-210ENST00000528364 STARD6P59095 220 aa16.96■□□□□ 0.31
CLNS1A-210ENST00000528364 GRIN1Q05586 938 aa16.96■□□□□ 0.31
CLNS1A-210ENST00000528364 NOLC1Q14978 699 aaKnown RBP eCLIP16.96■□□□□ 0.311e-7■□□□□ 9.1
CLNS1A-210ENST00000528364 CTXN3Q4LDR2 81 aa16.96■□□□□ 0.31
CLNS1A-210ENST00000528364 SLC44A4Q53GD3 710 aa16.96■□□□□ 0.31
CLNS1A-210ENST00000528364 TCEAL4Q96EI5 215 aa16.96■□□□□ 0.31
CLNS1A-210ENST00000528364 CDK5RAP3Q96JB5 506 aa16.96■□□□□ 0.31
CLNS1A-210ENST00000528364 SUSD3Q96L08 255 aa16.96■□□□□ 0.31
CLNS1A-210ENST00000528364 TBC1D32Q96NH3 1257 aa16.96■□□□□ 0.31
CLNS1A-210ENST00000528364 CORO1BQ9BR76 489 aa16.96■□□□□ 0.31
CLNS1A-210ENST00000528364 CYP4F11Q9HBI6 524 aa16.96■□□□□ 0.31
CLNS1A-210ENST00000528364 DAXXQ9UER7 740 aaPredicted RBP16.96■□□□□ 0.31
CLNS1A-210ENST00000528364 KCNH3Q9ULD8 1083 aa16.96■□□□□ 0.31
CLNS1A-210ENST00000528364 KIF3AQ9Y496 699 aa16.96■□□□□ 0.31
CLNS1A-210ENST00000528364 R4GN57 208 aa16.96■□□□□ 0.31
CLNS1A-210ENST00000528364 GVINP1Q7Z2Y8 2422 aa16.96■□□□□ 0.3
CLNS1A-210ENST00000528364 H7C4K7 107 aa16.95■□□□□ 0.3
CLNS1A-210ENST00000528364 PRRG1O14668 218 aa16.95■□□□□ 0.3
CLNS1A-210ENST00000528364 SYN3O14994 580 aa16.95■□□□□ 0.3
CLNS1A-210ENST00000528364 CLDN3O15551 220 aa16.95■□□□□ 0.3
CLNS1A-210ENST00000528364 ATF2P15336 505 aa16.95■□□□□ 0.3
CLNS1A-210ENST00000528364 CEBPBP17676 345 aa16.95■□□□□ 0.3
CLNS1A-210ENST00000528364 PTPN2P17706 415 aa16.95■□□□□ 0.3
CLNS1A-210ENST00000528364 CD72P21854 359 aa16.95■□□□□ 0.3
CLNS1A-210ENST00000528364 MCM4P33991 863 aa16.95■□□□□ 0.3
CLNS1A-210ENST00000528364 TNFSF9P41273 254 aa16.95■□□□□ 0.3
CLNS1A-210ENST00000528364 MATR3P43243 847 aaKnown RBP eCLIP16.95■□□□□ 0.3
CLNS1A-210ENST00000528364 GUCY2FP51841 1108 aa16.95■□□□□ 0.3
CLNS1A-210ENST00000528364 MCL1Q07820 350 aa16.95■□□□□ 0.3
CLNS1A-210ENST00000528364 ZBTB41Q5SVQ8 909 aa16.95■□□□□ 0.3
CLNS1A-210ENST00000528364 TANGO2Q6ICL3 276 aa16.95■□□□□ 0.3
CLNS1A-210ENST00000528364 MTSS1LQ765P7 747 aa16.95■□□□□ 0.3
CLNS1A-210ENST00000528364 HAUS6Q7Z4H7 955 aa16.95■□□□□ 0.3
CLNS1A-210ENST00000528364 HS6ST3Q8IZP7 471 aa16.95■□□□□ 0.3
CLNS1A-210ENST00000528364 ADSSL1Q8N142 457 aa16.95■□□□□ 0.3
CLNS1A-210ENST00000528364 TIMM13Q9Y5L4 95 aaPredicted RBP16.95■□□□□ 0.3
CLNS1A-210ENST00000528364 LACTBL1A8MY62 500 aa16.94■□□□□ 0.3
CLNS1A-210ENST00000528364 LRG1P02750 347 aa16.94■□□□□ 0.3
CLNS1A-210ENST00000528364 CCR2P41597 374 aa16.94■□□□□ 0.3
CLNS1A-210ENST00000528364 MCM6Q14566 821 aa16.94■□□□□ 0.3
CLNS1A-210ENST00000528364 LARP1BQ659C4 914 aaKnown RBP16.94■□□□□ 0.3
CLNS1A-210ENST00000528364 ARL6IP4Q66PJ3 421 aaKnown RBP16.94■□□□□ 0.3
CLNS1A-210ENST00000528364 ZPBP2Q6X784 338 aa16.94■□□□□ 0.3
CLNS1A-210ENST00000528364 RTL10Q7L3V2 364 aa16.94■□□□□ 0.3
CLNS1A-210ENST00000528364 GPBP1Q86WP2 473 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms