RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 PRKG1Q13976 671 aa16.39■□□□□ 0.21
USH1C-207ENST00000527720 LIN9Q5TKA1 542 aa16.39■□□□□ 0.21
USH1C-207ENST00000527720 MON1BQ7L1V2 547 aa16.39■□□□□ 0.21
USH1C-207ENST00000527720 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.39■□□□□ 0.21
USH1C-207ENST00000527720 CCDC105Q8IYK2 499 aa16.39■□□□□ 0.21
USH1C-207ENST00000527720 OR2W6PQ8NHA6 318 aa16.39■□□□□ 0.21
USH1C-207ENST00000527720 ZBTB45Q96K62 511 aaPredicted RBP16.39■□□□□ 0.21
USH1C-207ENST00000527720 ATP8A1Q9Y2Q0 1164 aa16.39■□□□□ 0.21
USH1C-207ENST00000527720 SNX24Q9Y343 169 aa16.39■□□□□ 0.21
USH1C-207ENST00000527720 MROH7Q68CQ1 1323 aa16.39■□□□□ 0.21
USH1C-207ENST00000527720 EBAG9O00559 213 aa16.39■□□□□ 0.21
USH1C-207ENST00000527720 RARAP10276 462 aa16.39■□□□□ 0.21
USH1C-207ENST00000527720 LSP1P33241 339 aa16.39■□□□□ 0.21
USH1C-207ENST00000527720 MAN1A1P33908 653 aa16.39■□□□□ 0.21
USH1C-207ENST00000527720 PMS2P54278 862 aa16.39■□□□□ 0.21
USH1C-207ENST00000527720 KCNV1Q6PIU1 500 aa16.39■□□□□ 0.21
USH1C-207ENST00000527720 CROCCP2Q86T23 111 aa16.39■□□□□ 0.21
USH1C-207ENST00000527720 HOOK3Q86VS8 718 aa16.39■□□□□ 0.21
USH1C-207ENST00000527720 FBXO25Q8TCJ0 367 aa16.39■□□□□ 0.21
USH1C-207ENST00000527720 ELMO3Q96BJ8 720 aa16.39■□□□□ 0.21
USH1C-207ENST00000527720 EPN3Q9H201 632 aa16.39■□□□□ 0.21
USH1C-207ENST00000527720 MRPL47Q9HD33 250 aaKnown RBP16.39■□□□□ 0.21
USH1C-207ENST00000527720 ANKFY1Q9P2R3 1169 aa16.39■□□□□ 0.21
USH1C-207ENST00000527720 MYO1CO00159 1063 aa16.38■□□□□ 0.21
USH1C-207ENST00000527720 RPL21P46778 160 aaKnown RBP16.38■□□□□ 0.21
USH1C-207ENST00000527720 IER5Q5VY09 327 aa16.38■□□□□ 0.21
USH1C-207ENST00000527720 BRSK2Q8IWQ3 736 aa16.38■□□□□ 0.21
USH1C-207ENST00000527720 ABRAQ8N0Z2 381 aa16.38■□□□□ 0.21
USH1C-207ENST00000527720 TCP11Q8WWU5 503 aa16.38■□□□□ 0.21
USH1C-207ENST00000527720 CPA5Q8WXQ8 436 aa16.38■□□□□ 0.21
USH1C-207ENST00000527720 APOBEC3GQ9HC16 384 aaKnown RBP16.38■□□□□ 0.21
USH1C-207ENST00000527720 PCDHB4Q9Y5E5 795 aa16.38■□□□□ 0.21
USH1C-207ENST00000527720 CLDN3O15551 220 aa16.38■□□□□ 0.21
USH1C-207ENST00000527720 RRM1P23921 792 aa16.38■□□□□ 0.21
USH1C-207ENST00000527720 GNA15P30679 374 aa16.38■□□□□ 0.21
USH1C-207ENST00000527720 TCF7P36402 384 aaPredicted RBP16.38■□□□□ 0.21
USH1C-207ENST00000527720 NOP14P78316 857 aaKnown RBP16.38■□□□□ 0.21
USH1C-207ENST00000527720 IFFO1Q0D2I5 559 aa16.38■□□□□ 0.21
USH1C-207ENST00000527720 SLMAPQ14BN4 828 aa16.38■□□□□ 0.21
USH1C-207ENST00000527720 SPOPLQ6IQ16 392 aa16.38■□□□□ 0.21
USH1C-207ENST00000527720 SYDE1Q6ZW31 735 aaPredicted RBP16.38■□□□□ 0.21
USH1C-207ENST00000527720 NCAPG2Q86XI2 1143 aa16.38■□□□□ 0.21
USH1C-207ENST00000527720 PHF13Q86YI8 300 aaPredicted RBP16.38■□□□□ 0.21
USH1C-207ENST00000527720 CPNE8Q86YQ8 564 aa16.38■□□□□ 0.21
USH1C-207ENST00000527720 BBXQ8WY36 941 aaPredicted RBP16.38■□□□□ 0.21
USH1C-207ENST00000527720 IMPG2Q9BZV3 1241 aa16.38■□□□□ 0.21
USH1C-207ENST00000527720 CENPHQ9H3R5 247 aa16.38■□□□□ 0.21
USH1C-207ENST00000527720 AZI2Q9H6S1 392 aa16.38■□□□□ 0.21
USH1C-207ENST00000527720 SCINQ9Y6U3 715 aa16.38■□□□□ 0.21
USH1C-207ENST00000527720 A0A0G2JLL6 359 aaPredicted RBP16.37■□□□□ 0.21
USH1C-207ENST00000527720 TCRBV7S2A1N4TA0A589 114 aa16.37■□□□□ 0.21
USH1C-207ENST00000527720 IRF6O14896 467 aa16.37■□□□□ 0.21
USH1C-207ENST00000527720 PROSCO94903 275 aa16.37■□□□□ 0.21
USH1C-207ENST00000527720 ECEL1O95672 775 aa16.37■□□□□ 0.21
USH1C-207ENST00000527720 SLC25A27O95847 323 aa16.37■□□□□ 0.21
USH1C-207ENST00000527720 CCT5P48643 541 aa16.37■□□□□ 0.21
USH1C-207ENST00000527720 NOMO3P69849 1222 aa16.37■□□□□ 0.21
USH1C-207ENST00000527720 KRT71Q3SY84 523 aa16.37■□□□□ 0.21
USH1C-207ENST00000527720 CDCA2Q69YH5 1023 aaPredicted RBP16.37■□□□□ 0.21
USH1C-207ENST00000527720 TTC19Q6DKK2 380 aaPredicted RBP16.37■□□□□ 0.21
USH1C-207ENST00000527720 PRRT2Q7Z6L0 340 aaPredicted RBP16.37■□□□□ 0.21
USH1C-207ENST00000527720 SPATS2Q86XZ4 545 aaKnown RBP16.37■□□□□ 0.21
USH1C-207ENST00000527720 WDR49Q8IV35 697 aa16.37■□□□□ 0.21
USH1C-207ENST00000527720 ART4Q93070 314 aa16.37■□□□□ 0.21
USH1C-207ENST00000527720 CYFIP2Q96F07 1278 aa16.37■□□□□ 0.21
USH1C-207ENST00000527720 MRPL4Q9BYD3 311 aaKnown RBP16.37■□□□□ 0.21
USH1C-207ENST00000527720 ANK1P16157 1881 aa16.37■□□□□ 0.21
USH1C-207ENST00000527720 PSTPIP1O43586 416 aa16.36■□□□□ 0.21
USH1C-207ENST00000527720 TOM1L1O75674 476 aa16.36■□□□□ 0.21
USH1C-207ENST00000527720 EDN1P05305 212 aa16.36■□□□□ 0.21
USH1C-207ENST00000527720 PPP2R2AP63151 447 aa16.36■□□□□ 0.21
USH1C-207ENST00000527720 IRX3P78415 501 aaPredicted RBP16.36■□□□□ 0.21
USH1C-207ENST00000527720 GUCY1A3Q02108 690 aa16.36■□□□□ 0.21
USH1C-207ENST00000527720 C1QBPQ07021 282 aaKnown RBP16.36■□□□□ 0.21
USH1C-207ENST00000527720 NCOA4Q13772 614 aa16.36■□□□□ 0.21
USH1C-207ENST00000527720 MXD4Q14582 209 aaPredicted RBP16.36■□□□□ 0.21
USH1C-207ENST00000527720 SURF1Q15526 300 aa16.36■□□□□ 0.21
USH1C-207ENST00000527720 PTGISQ16647 500 aa16.36■□□□□ 0.21
USH1C-207ENST00000527720 ZBTB41Q5SVQ8 909 aa16.36■□□□□ 0.21
USH1C-207ENST00000527720 DENND2CQ68D51 928 aa16.36■□□□□ 0.21
USH1C-207ENST00000527720 TMEM270Q6UE05 265 aa16.36■□□□□ 0.21
USH1C-207ENST00000527720 FAM84AQ96KN4 292 aa16.36■□□□□ 0.21
USH1C-207ENST00000527720 CCDC113Q9H0I3 377 aa16.36■□□□□ 0.21
USH1C-207ENST00000527720 EPB41L4BQ9H329 900 aa16.36■□□□□ 0.21
USH1C-207ENST00000527720 SLC12A6Q9UHW9 1150 aa16.36■□□□□ 0.21
USH1C-207ENST00000527720 NDUFAB1O14561 156 aa16.36■□□□□ 0.21
USH1C-207ENST00000527720 MSCO60682 206 aa16.36■□□□□ 0.21
USH1C-207ENST00000527720 LGR5O75473 907 aa16.36■□□□□ 0.21
USH1C-207ENST00000527720 IREB2P48200 963 aaKnown RBP16.36■□□□□ 0.21
USH1C-207ENST00000527720 SGO2Q562F6 1265 aa16.36■□□□□ 0.21
USH1C-207ENST00000527720 GADL1Q6ZQY3 521 aa16.36■□□□□ 0.21
USH1C-207ENST00000527720 B4GALNT4Q76KP1 1039 aa16.36■□□□□ 0.21
USH1C-207ENST00000527720 RBBP8NLQ8NC74 664 aaPredicted RBP16.36■□□□□ 0.21
USH1C-207ENST00000527720 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.36■□□□□ 0.21
USH1C-207ENST00000527720 GRK7Q8WTQ7 553 aa16.36■□□□□ 0.21
USH1C-207ENST00000527720 HOMER3Q9NSC5 361 aa16.36■□□□□ 0.21
USH1C-207ENST00000527720 FEZ2Q9UHY8 353 aaPredicted RBP16.36■□□□□ 0.21
USH1C-207ENST00000527720 LCMT1Q9UIC8 334 aa16.36■□□□□ 0.21
USH1C-207ENST00000527720 NUB1Q9Y5A7 615 aa16.36■□□□□ 0.21
USH1C-207ENST00000527720 FAM189A1O60320 539 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms