RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 HNRNPRO43390 633 aaKnown RBP7.94□□□□□ -1.14
SOX6-208ENST00000527619 CYTH3O43739 400 aa7.94□□□□□ -1.14
SOX6-208ENST00000527619 HNRNPCL1O60812 293 aaKnown RBP7.94□□□□□ -1.14
SOX6-208ENST00000527619 ASLP04424 464 aa7.94□□□□□ -1.14
SOX6-208ENST00000527619 UQCRFS1P1P0C7P4 283 aa7.94□□□□□ -1.14
SOX6-208ENST00000527619 TAC1P20366 129 aa7.94□□□□□ -1.14
SOX6-208ENST00000527619 HOXA7P31268 230 aaPredicted RBP7.94□□□□□ -1.14
SOX6-208ENST00000527619 IGHMBP2P38935 993 aaKnown RBP7.94□□□□□ -1.14
SOX6-208ENST00000527619 RPL21P46778 160 aaKnown RBP7.94□□□□□ -1.14
SOX6-208ENST00000527619 RTP1P59025 263 aa7.94□□□□□ -1.14
SOX6-208ENST00000527619 TROAPQ12815 778 aa7.94□□□□□ -1.14
SOX6-208ENST00000527619 ALKBH5Q6P6C2 394 aaKnown RBP7.94□□□□□ -1.14
SOX6-208ENST00000527619 UNC13DQ70J99 1090 aa7.94□□□□□ -1.14
SOX6-208ENST00000527619 PCGF5Q86SE9 256 aa7.94□□□□□ -1.14
SOX6-208ENST00000527619 NELFCDQ8IXH7 590 aa7.94□□□□□ -1.14
SOX6-208ENST00000527619 SPERTQ8NA61 448 aa7.94□□□□□ -1.14
SOX6-208ENST00000527619 HELQQ8TDG4 1101 aa7.94□□□□□ -1.14
SOX6-208ENST00000527619 LENG1Q96BZ8 264 aaPredicted RBP7.94□□□□□ -1.14
SOX6-208ENST00000527619 C1orf74Q96LT6 269 aa7.94□□□□□ -1.14
SOX6-208ENST00000527619 FNBP1Q96RU3 617 aa7.94□□□□□ -1.14
SOX6-208ENST00000527619 ZNF184Q99676 751 aaPredicted RBP7.94□□□□□ -1.14
SOX6-208ENST00000527619 HNRNPABQ99729 332 aaKnown RBP7.94□□□□□ -1.14
SOX6-208ENST00000527619 GANQ9H2C0 597 aa7.94□□□□□ -1.14
SOX6-208ENST00000527619 ERVK-5Q9HDB9 667 aa7.94□□□□□ -1.14
SOX6-208ENST00000527619 RIC8AQ9NPQ8 531 aa7.94□□□□□ -1.14
SOX6-208ENST00000527619 RYDENQ9NUL5 291 aaKnown RBP7.94□□□□□ -1.14
SOX6-208ENST00000527619 DDX43Q9NXZ2 648 aaKnown RBP7.94□□□□□ -1.14
SOX6-208ENST00000527619 NKIRAS1Q9NYS0 192 aa7.94□□□□□ -1.14
SOX6-208ENST00000527619 ARMCX3Q9UH62 379 aaPredicted RBP7.94□□□□□ -1.14
SOX6-208ENST00000527619 TCEAL9Q9UHQ7 104 aa7.94□□□□□ -1.14
SOX6-208ENST00000527619 CASZ1Q86V15 1759 aa7.94□□□□□ -1.14
SOX6-208ENST00000527619 PFASO15067 1338 aa7.94□□□□□ -1.14
SOX6-208ENST00000527619 PASKQ96RG2 1323 aa7.94□□□□□ -1.14
SOX6-208ENST00000527619 TRPM3Q9HCF6 1732 aaPredicted RBP7.94□□□□□ -1.14
SOX6-208ENST00000527619 MYH3P11055 1940 aa7.94□□□□□ -1.14
SOX6-208ENST00000527619 PODXLO00592 558 aa7.94□□□□□ -1.14
SOX6-208ENST00000527619 CAPN9O14815 690 aa7.94□□□□□ -1.14
SOX6-208ENST00000527619 DDX3YO15523 660 aaKnown RBP7.94□□□□□ -1.14
SOX6-208ENST00000527619 SPATA31D3P0C874 917 aa7.94□□□□□ -1.14
SOX6-208ENST00000527619 GSTT2P0CG29 244 aa7.94□□□□□ -1.14
SOX6-208ENST00000527619 GSTT2BP0CG30 244 aa7.94□□□□□ -1.14
SOX6-208ENST00000527619 BRAFP15056 766 aa7.94□□□□□ -1.14
SOX6-208ENST00000527619 PTGIRP43119 386 aa7.94□□□□□ -1.14
SOX6-208ENST00000527619 CDK7P50613 346 aa7.94□□□□□ -1.14
SOX6-208ENST00000527619 FAM209AQ5JX71 171 aa7.94□□□□□ -1.14
SOX6-208ENST00000527619 PPP1R21Q6ZMI0 780 aa7.94□□□□□ -1.14
SOX6-208ENST00000527619 SPATA31D4Q6ZUB0 917 aa7.94□□□□□ -1.14
SOX6-208ENST00000527619 TRMT10CQ7L0Y3 403 aaKnown RBP7.94□□□□□ -1.14
SOX6-208ENST00000527619 HS2ST1Q7LGA3 356 aa7.94□□□□□ -1.14
SOX6-208ENST00000527619 IRF2BP2Q7Z5L9 587 aa7.94□□□□□ -1.14
SOX6-208ENST00000527619 KRT77Q7Z794 578 aa7.94□□□□□ -1.14
SOX6-208ENST00000527619 LCORLQ8N3X6 602 aa7.94□□□□□ -1.14
SOX6-208ENST00000527619 PAF1Q8N7H5 531 aa7.94□□□□□ -1.14
SOX6-208ENST00000527619 GOLM1Q8NBJ4 401 aa7.94□□□□□ -1.14
SOX6-208ENST00000527619 CASP10Q92851 521 aa7.94□□□□□ -1.14
SOX6-208ENST00000527619 NGLY1Q96IV0 654 aa7.94□□□□□ -1.14
SOX6-208ENST00000527619 UQCC2Q9BRT2 126 aa7.94□□□□□ -1.14
SOX6-208ENST00000527619 NDEL1Q9GZM8 345 aa7.94□□□□□ -1.14
SOX6-208ENST00000527619 KRT82Q9NSB4 513 aa7.94□□□□□ -1.14
SOX6-208ENST00000527619 ZNF212Q9UDV6 495 aa7.94□□□□□ -1.14
SOX6-208ENST00000527619 PCDHA4Q9UN74 947 aa7.94□□□□□ -1.14
SOX6-208ENST00000527619 CHMP2BQ9UQN3 213 aa7.94□□□□□ -1.14
SOX6-208ENST00000527619 PVALEFA0A1B0GWK0 134 aa7.93□□□□□ -1.14
SOX6-208ENST00000527619 SNX2O60749 519 aa7.93□□□□□ -1.14
SOX6-208ENST00000527619 KCNJ13O60928 360 aa7.93□□□□□ -1.14
SOX6-208ENST00000527619 PHF2O75151 1096 aa7.93□□□□□ -1.14
SOX6-208ENST00000527619 KRT36O76013 467 aa7.93□□□□□ -1.14
SOX6-208ENST00000527619 PSMG1O95456 288 aa7.93□□□□□ -1.14
SOX6-208ENST00000527619 GCP02774 474 aa7.93□□□□□ -1.14
SOX6-208ENST00000527619 H2AFZP0C0S5 128 aa7.93□□□□□ -1.14
SOX6-208ENST00000527619 ZCCHC18P0CG32 403 aa7.93□□□□□ -1.14
SOX6-208ENST00000527619 KRT13P13646 458 aa7.93□□□□□ -1.14
SOX6-208ENST00000527619 ANXA13P27216 316 aa7.93□□□□□ -1.14
SOX6-208ENST00000527619 CDR2Q01850 454 aa7.93□□□□□ -1.14
SOX6-208ENST00000527619 IFIT5Q13325 482 aaKnown RBP7.93□□□□□ -1.14
SOX6-208ENST00000527619 MPP2Q14168 576 aa7.93□□□□□ -1.14
SOX6-208ENST00000527619 TXNRD1Q16881 649 aa7.93□□□□□ -1.14
SOX6-208ENST00000527619 WDR72Q3MJ13 1102 aa7.93□□□□□ -1.14
SOX6-208ENST00000527619 SH3D19Q5HYK7 790 aa7.93□□□□□ -1.14
SOX6-208ENST00000527619 DCAF12L1Q5VU92 463 aa7.93□□□□□ -1.14
SOX6-208ENST00000527619 DAB2IPQ5VWQ8 1189 aa7.93□□□□□ -1.14
SOX6-208ENST00000527619 RFWD3Q6PCD5 774 aa7.93□□□□□ -1.14
SOX6-208ENST00000527619 CCDC174Q6PII3 467 aa7.93□□□□□ -1.14
SOX6-208ENST00000527619 FAM47EQ6ZV65 393 aa7.93□□□□□ -1.14
SOX6-208ENST00000527619 H2AFVQ71UI9 128 aa7.93□□□□□ -1.14
SOX6-208ENST00000527619 SV2BQ7L1I2 683 aa7.93□□□□□ -1.14
SOX6-208ENST00000527619 ADAT2Q7Z6V5 191 aaKnown RBP7.93□□□□□ -1.14
SOX6-208ENST00000527619 DNAAF5Q86Y56 855 aa7.93□□□□□ -1.14
SOX6-208ENST00000527619 FAM20CQ8IXL6 584 aa7.93□□□□□ -1.14
SOX6-208ENST00000527619 DQX1Q8TE96 717 aaKnown RBP7.93□□□□□ -1.14
SOX6-208ENST00000527619 TCF12Q99081 682 aa7.93□□□□□ -1.14
SOX6-208ENST00000527619 DDX50Q9BQ39 737 aaKnown RBP7.93□□□□□ -1.14
SOX6-208ENST00000527619 ASCC2Q9H1I8 757 aaPredicted RBP7.93□□□□□ -1.14
SOX6-208ENST00000527619 TYW1Q9NV66 732 aaKnown RBP7.93□□□□□ -1.14
SOX6-208ENST00000527619 ETNK2Q9NVF9 386 aa7.93□□□□□ -1.14
SOX6-208ENST00000527619 SATB2Q9UPW6 733 aa7.93□□□□□ -1.14
SOX6-208ENST00000527619 TBC1D30Q9Y2I9 924 aa7.93□□□□□ -1.14
SOX6-208ENST00000527619 NOSIPQ9Y314 301 aaKnown RBP7.93□□□□□ -1.14
SOX6-208ENST00000527619 RTCBQ9Y3I0 505 aaKnown RBP7.93□□□□□ -1.14
SOX6-208ENST00000527619 TSC22D4Q9Y3Q8 395 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms