RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 SLC39A2Q9NP94 309 aa14.54□□□□□ -0.08
CAPN1-209ENST00000527469 CHST7Q9NS84 486 aa14.54□□□□□ -0.08
CAPN1-209ENST00000527469 CLEC1BQ9P126 229 aa14.54□□□□□ -0.08
CAPN1-209ENST00000527469 TUBGCP4Q9UGJ1 667 aa14.54□□□□□ -0.08
CAPN1-209ENST00000527469 UBE4BO95155 1302 aa14.54□□□□□ -0.08
CAPN1-209ENST00000527469 TCHHQ07283 1943 aa14.54□□□□□ -0.08
CAPN1-209ENST00000527469 KIAA0391O15091 583 aaKnown RBP14.53□□□□□ -0.08
CAPN1-209ENST00000527469 FAM189A1O60320 539 aa14.53□□□□□ -0.08
CAPN1-209ENST00000527469 IL18RAPO95256 599 aa14.53□□□□□ -0.08
CAPN1-209ENST00000527469 GLUD1P00367 558 aa14.53□□□□□ -0.08
CAPN1-209ENST00000527469 CYP3A5P20815 502 aa14.53□□□□□ -0.08
CAPN1-209ENST00000527469 ADSSP30520 456 aa14.53□□□□□ -0.08
CAPN1-209ENST00000527469 SSTR3P32745 418 aaPredicted RBP14.53□□□□□ -0.08
CAPN1-209ENST00000527469 MCM4P33991 863 aa14.53□□□□□ -0.08
CAPN1-209ENST00000527469 PSMD5Q16401 504 aa14.53□□□□□ -0.08
CAPN1-209ENST00000527469 KIAA0319Q5VV43 1072 aa14.53□□□□□ -0.08
CAPN1-209ENST00000527469 JADE1Q6IE81 842 aa14.53□□□□□ -0.08
CAPN1-209ENST00000527469 ANKRD54Q6NXT1 300 aa14.53□□□□□ -0.08
CAPN1-209ENST00000527469 TMEM184AQ6ZMB5 413 aa14.53□□□□□ -0.08
CAPN1-209ENST00000527469 KRBA2Q6ZNG9 492 aa14.53□□□□□ -0.08
CAPN1-209ENST00000527469 GLYCTKQ8IVS8 523 aa14.53□□□□□ -0.08
CAPN1-209ENST00000527469 NELFCDQ8IXH7 590 aa14.53□□□□□ -0.08
CAPN1-209ENST00000527469 GPR65Q8IYL9 337 aa14.53□□□□□ -0.08
CAPN1-209ENST00000527469 RNF168Q8IYW5 571 aaPredicted RBP14.53□□□□□ -0.08
CAPN1-209ENST00000527469 GLIS3Q8NEA6 775 aa14.53□□□□□ -0.08
CAPN1-209ENST00000527469 MSLNLQ96KJ4 702 aa14.53□□□□□ -0.08
CAPN1-209ENST00000527469 APOL5Q9BWW9 433 aa14.53□□□□□ -0.08
CAPN1-209ENST00000527469 GOLPH3LQ9H4A5 285 aa14.53□□□□□ -0.08
CAPN1-209ENST00000527469 PCIF1Q9H4Z3 704 aa14.53□□□□□ -0.08
CAPN1-209ENST00000527469 ASB7Q9H672 318 aa14.53□□□□□ -0.08
CAPN1-209ENST00000527469 RBAKQ9NYW8 714 aaPredicted RBP14.53□□□□□ -0.08
CAPN1-209ENST00000527469 CHMP5Q9NZZ3 219 aa14.53□□□□□ -0.08
CAPN1-209ENST00000527469 HOOK1Q9UJC3 728 aaKnown RBP14.53□□□□□ -0.08
CAPN1-209ENST00000527469 TRIP11Q15643 1979 aa14.53□□□□□ -0.08
CAPN1-209ENST00000527469 SPTBN5Q9NRC6 3674 aaKnown RBP14.52□□□□□ -0.08
CAPN1-209ENST00000527469 XIRP2A4UGR9 3374 aa14.52□□□□□ -0.08
CAPN1-209ENST00000527469 FAM237AA0A1B0GTK4 181 aa14.52□□□□□ -0.09
CAPN1-209ENST00000527469 I3L4J1 428 aa14.52□□□□□ -0.09
CAPN1-209ENST00000527469 TEX28O15482 410 aa14.52□□□□□ -0.09
CAPN1-209ENST00000527469 MBTPS2O43462 519 aa14.52□□□□□ -0.09
CAPN1-209ENST00000527469 EXTL3O43909 919 aa14.52□□□□□ -0.09
CAPN1-209ENST00000527469 ZNF202O95125 648 aa14.52□□□□□ -0.09
CAPN1-209ENST00000527469 RPN1P04843 607 aaKnown RBP14.52□□□□□ -0.09
CAPN1-209ENST00000527469 IL9P15248 144 aa14.52□□□□□ -0.09
CAPN1-209ENST00000527469 EPCAMP16422 314 aa14.52□□□□□ -0.09
CAPN1-209ENST00000527469 PSMD2Q13200 908 aa14.52□□□□□ -0.09
CAPN1-209ENST00000527469 RTP2Q5QGT7 225 aa14.52□□□□□ -0.09
CAPN1-209ENST00000527469 PRSS55Q6UWB4 352 aaPredicted RBP14.52□□□□□ -0.09
CAPN1-209ENST00000527469 PALB2Q86YC2 1186 aa14.52□□□□□ -0.09
CAPN1-209ENST00000527469 SMRP1Q8NCR6 262 aa14.52□□□□□ -0.09
CAPN1-209ENST00000527469 PIK3R5Q8WYR1 880 aa14.52□□□□□ -0.09
CAPN1-209ENST00000527469 FBXL18Q96ME1 805 aa14.52□□□□□ -0.09
CAPN1-209ENST00000527469 POP1Q99575 1024 aaKnown RBP14.52□□□□□ -0.09
CAPN1-209ENST00000527469 CBWD1Q9BRT8 395 aa14.52□□□□□ -0.09
CAPN1-209ENST00000527469 RXFP1Q9HBX9 757 aa14.52□□□□□ -0.09
CAPN1-209ENST00000527469 DERAQ9Y315 318 aa14.52□□□□□ -0.09
CAPN1-209ENST00000527469 R3HCC1Q9Y3T6 440 aaKnown RBP14.52□□□□□ -0.09
CAPN1-209ENST00000527469 USP15Q9Y4E8 981 aaPredicted RBP14.52□□□□□ -0.09
CAPN1-209ENST00000527469 TCF20Q9UGU0 1960 aaKnown RBP14.51□□□□□ -0.09
CAPN1-209ENST00000527469 GOLGA8IPA6NC78 632 aa14.51□□□□□ -0.09
CAPN1-209ENST00000527469 GOLGA8JA6NMD2 632 aa14.51□□□□□ -0.09
CAPN1-209ENST00000527469 MEFVO15553 781 aaPredicted RBP14.51□□□□□ -0.09
CAPN1-209ENST00000527469 LILRB3O75022 631 aa14.51□□□□□ -0.09
CAPN1-209ENST00000527469 KIF20AO95235 890 aa14.51□□□□□ -0.09
CAPN1-209ENST00000527469 EFEMP2O95967 443 aa14.51□□□□□ -0.09
CAPN1-209ENST00000527469 NFICP08651 508 aa14.51□□□□□ -0.09
CAPN1-209ENST00000527469 RPL17P18621 184 aaKnown RBP14.51□□□□□ -0.09
CAPN1-209ENST00000527469 BRCC3P46736 316 aa14.51□□□□□ -0.09
CAPN1-209ENST00000527469 CLCN4P51793 760 aa14.51□□□□□ -0.09
CAPN1-209ENST00000527469 POU5F1Q01860 360 aaKnown RBP14.51□□□□□ -0.09
CAPN1-209ENST00000527469 ITIH3Q06033 890 aa14.51□□□□□ -0.09
CAPN1-209ENST00000527469 KMT5BQ4FZB7 885 aa14.51□□□□□ -0.09
CAPN1-209ENST00000527469 RARS2Q5T160 578 aaKnown RBP14.51□□□□□ -0.09
CAPN1-209ENST00000527469 ANKS3Q6ZW76 656 aa14.51□□□□□ -0.09
CAPN1-209ENST00000527469 EPM2AIP1Q7L775 607 aaPredicted RBP14.51□□□□□ -0.09
CAPN1-209ENST00000527469 GPD1LQ8N335 351 aa14.51□□□□□ -0.09
CAPN1-209ENST00000527469 APPL2Q8NEU8 664 aa14.51□□□□□ -0.09
CAPN1-209ENST00000527469 GOLGA5Q8TBA6 731 aa14.51□□□□□ -0.09
CAPN1-209ENST00000527469 ZNF507Q8TCN5 953 aa14.51□□□□□ -0.09
CAPN1-209ENST00000527469 NECAB3Q96P71 396 aaPredicted RBP14.51□□□□□ -0.09
CAPN1-209ENST00000527469 SFXN1Q9H9B4 322 aa14.51□□□□□ -0.09
CAPN1-209ENST00000527469 KIAA1586Q9HCI6 787 aa14.51□□□□□ -0.09
CAPN1-209ENST00000527469 FNIP2Q9P278 1114 aa14.51□□□□□ -0.09
CAPN1-209ENST00000527469 C2CD2Q9Y426 696 aa14.51□□□□□ -0.09
CAPN1-209ENST00000527469 ZNF233A6NK53 670 aa14.5□□□□□ -0.09
CAPN1-209ENST00000527469 H7C4K7 107 aa14.5□□□□□ -0.09
CAPN1-209ENST00000527469 SYN3O14994 580 aa14.5□□□□□ -0.09
CAPN1-209ENST00000527469 FGFR3P22607 806 aa14.5□□□□□ -0.09
CAPN1-209ENST00000527469 TKTP29401 623 aaKnown RBP14.5□□□□□ -0.09
CAPN1-209ENST00000527469 LRPAP1P30533 357 aa14.5□□□□□ -0.09
CAPN1-209ENST00000527469 CYP2J2P51589 502 aa14.5□□□□□ -0.09
CAPN1-209ENST00000527469 GUCY2FP51841 1108 aa14.5□□□□□ -0.09
CAPN1-209ENST00000527469 SNRPFP62306 86 aaKnown RBP14.5□□□□□ -0.09
CAPN1-209ENST00000527469 TFAMQ00059 246 aaKnown RBP14.5□□□□□ -0.09
CAPN1-209ENST00000527469 FAM160A1Q05DH4 1040 aa14.5□□□□□ -0.09
CAPN1-209ENST00000527469 KCNC3Q14003 757 aa14.5□□□□□ -0.09
CAPN1-209ENST00000527469 SMAD2Q15796 467 aaKnown RBP14.5□□□□□ -0.09
CAPN1-209ENST00000527469 KNOP1Q1ED39 458 aaKnown RBP14.5□□□□□ -0.09
CAPN1-209ENST00000527469 LIN9Q5TKA1 542 aa14.5□□□□□ -0.09
CAPN1-209ENST00000527469 SPATA1Q5VX52 437 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms