RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 ATF2P15336 505 aa13.32□□□□□ -0.28
CAPN1-208ENST00000527323 CDC25CP30307 473 aa13.32□□□□□ -0.28
CAPN1-208ENST00000527323 EPHX2P34913 555 aa13.32□□□□□ -0.28
CAPN1-208ENST00000527323 SLC8A3P57103 927 aa13.32□□□□□ -0.28
CAPN1-208ENST00000527323 MPP2Q14168 576 aa13.32□□□□□ -0.28
CAPN1-208ENST00000527323 SIX1Q15475 284 aaPredicted RBP13.32□□□□□ -0.28
CAPN1-208ENST00000527323 GALNTL6Q49A17 601 aa13.32□□□□□ -0.28
CAPN1-208ENST00000527323 ARHGEF18Q6ZSZ5 1173 aa13.32□□□□□ -0.28
CAPN1-208ENST00000527323 EP400NLQ6ZTU2 488 aa13.32□□□□□ -0.28
CAPN1-208ENST00000527323 SLC9A9Q8IVB4 645 aa13.32□□□□□ -0.28
CAPN1-208ENST00000527323 CD101Q93033 1021 aa13.32□□□□□ -0.28
CAPN1-208ENST00000527323 ELMO3Q96BJ8 720 aa13.32□□□□□ -0.28
CAPN1-208ENST00000527323 SNF8Q96H20 258 aa13.32□□□□□ -0.28
CAPN1-208ENST00000527323 CCDC77Q9BR77 488 aa13.32□□□□□ -0.28
CAPN1-208ENST00000527323 SH2D3AQ9BRG2 576 aa13.32□□□□□ -0.28
CAPN1-208ENST00000527323 UNC45AQ9H3U1 944 aa13.32□□□□□ -0.28
CAPN1-208ENST00000527323 RXFP1Q9HBX9 757 aa13.32□□□□□ -0.28
CAPN1-208ENST00000527323 SLC24A3Q9HC58 644 aa13.32□□□□□ -0.28
CAPN1-208ENST00000527323 FOCADQ5VW36 1801 aa13.32□□□□□ -0.28
CAPN1-208ENST00000527323 OAS1P00973 400 aaKnown RBP13.32□□□□□ -0.28
CAPN1-208ENST00000527323 POLR2MP0CAP2 368 aa13.32□□□□□ -0.28
CAPN1-208ENST00000527323 ARP10275 920 aa13.32□□□□□ -0.28
CAPN1-208ENST00000527323 RPS12P25398 132 aaKnown RBP13.32□□□□□ -0.28
CAPN1-208ENST00000527323 MAPK4P31152 587 aa13.32□□□□□ -0.28
CAPN1-208ENST00000527323 MFAP3P55082 362 aa13.32□□□□□ -0.28
CAPN1-208ENST00000527323 PPP2R5CQ13362 524 aa13.32□□□□□ -0.28
CAPN1-208ENST00000527323 XXYLT1Q8NBI6 393 aa13.32□□□□□ -0.28
CAPN1-208ENST00000527323 ZSWIM2Q8NEG5 633 aa13.32□□□□□ -0.28
CAPN1-208ENST00000527323 L3MBTL3Q96JM7 780 aaPredicted RBP13.32□□□□□ -0.28
CAPN1-208ENST00000527323 PITPNM3Q9BZ71 974 aa13.32□□□□□ -0.28
CAPN1-208ENST00000527323 ETNK1Q9HBU6 452 aa13.32□□□□□ -0.28
CAPN1-208ENST00000527323 ANAPC7Q9UJX3 599 aa13.32□□□□□ -0.28
CAPN1-208ENST00000527323 ERICH1Q86X53 443 aa13.31□□□□□ -0.28
CAPN1-208ENST00000527323 VSIG1Q86XK7 387 aa13.31□□□□□ -0.28
CAPN1-208ENST00000527323 CYP4X1Q8N118 509 aa13.31□□□□□ -0.28
CAPN1-208ENST00000527323 KCNV2Q8TDN2 545 aa13.31□□□□□ -0.28
CAPN1-208ENST00000527323 RMDN2Q96LZ7 410 aa13.31□□□□□ -0.28
CAPN1-208ENST00000527323 ACCSQ96QU6 501 aa13.31□□□□□ -0.28
CAPN1-208ENST00000527323 HEMGNQ9BXL5 484 aa13.31□□□□□ -0.28
CAPN1-208ENST00000527323 RPAP3Q9H6T3 665 aaPredicted RBP13.31□□□□□ -0.28
CAPN1-208ENST00000527323 TMEM206Q9H813 350 aa13.31□□□□□ -0.28
CAPN1-208ENST00000527323 PICK1Q9NRD5 415 aa13.31□□□□□ -0.28
CAPN1-208ENST00000527323 HSPBP1Q9NZL4 362 aa13.31□□□□□ -0.28
CAPN1-208ENST00000527323 TMX2Q9Y320 296 aa13.31□□□□□ -0.28
CAPN1-208ENST00000527323 NFIBO00712 420 aa13.31□□□□□ -0.28
CAPN1-208ENST00000527323 FMO1Q01740 532 aa13.31□□□□□ -0.28
CAPN1-208ENST00000527323 VGLL4Q14135 290 aa13.31□□□□□ -0.28
CAPN1-208ENST00000527323 EPC2Q52LR7 807 aa13.31□□□□□ -0.28
CAPN1-208ENST00000527323 CEP55Q53EZ4 464 aa13.31□□□□□ -0.28
CAPN1-208ENST00000527323 MICAL1Q8TDZ2 1067 aa13.31□□□□□ -0.28
CAPN1-208ENST00000527323 SLC5A5Q92911 643 aa13.31□□□□□ -0.28
CAPN1-208ENST00000527323 ATG4CQ96DT6 458 aa13.31□□□□□ -0.28
CAPN1-208ENST00000527323 C9orf72Q96LT7 481 aa13.31□□□□□ -0.28
CAPN1-208ENST00000527323 FAM118BQ9BPY3 351 aa13.31□□□□□ -0.28
CAPN1-208ENST00000527323 TEKT3Q9BXF9 490 aa13.31□□□□□ -0.28
CAPN1-208ENST00000527323 WDR11Q9BZH6 1224 aa13.31□□□□□ -0.28
CAPN1-208ENST00000527323 TMEM117Q9H0C3 514 aa13.31□□□□□ -0.28
CAPN1-208ENST00000527323 NMRK2Q9NPI5 230 aa13.31□□□□□ -0.28
CAPN1-208ENST00000527323 UVRAGQ9P2Y5 699 aa13.31□□□□□ -0.28
CAPN1-208ENST00000527323 GTF3C4Q9UKN8 822 aa13.31□□□□□ -0.28
CAPN1-208ENST00000527323 NAALADL1Q9UQQ1 740 aa13.31□□□□□ -0.28
CAPN1-208ENST00000527323 RIPK3Q9Y572 518 aa13.31□□□□□ -0.28
CAPN1-208ENST00000527323 O00370 1275 aa13.31□□□□□ -0.28
CAPN1-208ENST00000527323 FSCN2O14926 492 aa13.31□□□□□ -0.28
CAPN1-208ENST00000527323 CYP1A2P05177 515 aa13.31□□□□□ -0.28
CAPN1-208ENST00000527323 KRT5P13647 590 aa13.31□□□□□ -0.28
CAPN1-208ENST00000527323 SSR1P43307 286 aaKnown RBP13.31□□□□□ -0.28
CAPN1-208ENST00000527323 CYP4F22Q6NT55 531 aa13.31□□□□□ -0.28
CAPN1-208ENST00000527323 ZNF365Q70YC5 407 aa13.31□□□□□ -0.28
CAPN1-208ENST00000527323 FAM71AQ8IYT1 594 aa13.31□□□□□ -0.28
CAPN1-208ENST00000527323 MTMR14Q8NCE2 650 aa13.31□□□□□ -0.28
CAPN1-208ENST00000527323 FBF1Q8TES7 1133 aa13.31□□□□□ -0.28
CAPN1-208ENST00000527323 GMCL1Q96IK5 515 aa13.31□□□□□ -0.28
CAPN1-208ENST00000527323 PRDM16Q9HAZ2 1276 aa13.31□□□□□ -0.28
CAPN1-208ENST00000527323 ARHGEF3Q9NR81 526 aa13.31□□□□□ -0.28
CAPN1-208ENST00000527323 KCND2Q9NZV8 630 aa13.31□□□□□ -0.28
CAPN1-208ENST00000527323 NOCTQ9UK39 431 aaKnown RBP13.31□□□□□ -0.28
CAPN1-208ENST00000527323 P4HA2O15460 535 aa13.3□□□□□ -0.28
CAPN1-208ENST00000527323 MTA2O94776 668 aa13.3□□□□□ -0.28
CAPN1-208ENST00000527323 CYP11B1P15538 503 aa13.3□□□□□ -0.28
CAPN1-208ENST00000527323 STRN3Q13033 797 aa13.3□□□□□ -0.28
CAPN1-208ENST00000527323 TCEAL1Q15170 157 aa13.3□□□□□ -0.28
CAPN1-208ENST00000527323 DAW1Q8N136 415 aa13.3□□□□□ -0.28
CAPN1-208ENST00000527323 C12orf50Q8NA57 414 aaPredicted RBP13.3□□□□□ -0.28
CAPN1-208ENST00000527323 KREMEN1Q96MU8 473 aa13.3□□□□□ -0.28
CAPN1-208ENST00000527323 BATF3Q9NR55 127 aa13.3□□□□□ -0.28
CAPN1-208ENST00000527323 NINJ2Q9NZG7 142 aa13.3□□□□□ -0.28
CAPN1-208ENST00000527323 LTBP3Q9NS15 1303 aa13.3□□□□□ -0.28
CAPN1-208ENST00000527323 USP2O75604 605 aaPredicted RBP13.3□□□□□ -0.28
CAPN1-208ENST00000527323 GJB6O95452 261 aa13.3□□□□□ -0.28
CAPN1-208ENST00000527323 CALCAP01258 141 aa13.3□□□□□ -0.28
CAPN1-208ENST00000527323 PTPRAP18433 802 aa13.3□□□□□ -0.28
CAPN1-208ENST00000527323 GJC1P36383 396 aa13.3□□□□□ -0.28
CAPN1-208ENST00000527323 VASPP50552 380 aaPredicted RBP13.3□□□□□ -0.28
CAPN1-208ENST00000527323 IL9RQ01113 521 aa13.3□□□□□ -0.28
CAPN1-208ENST00000527323 SETDB1Q15047 1291 aa13.3□□□□□ -0.28
CAPN1-208ENST00000527323 TMED2Q15363 201 aa13.3□□□□□ -0.28
CAPN1-208ENST00000527323 BZW1Q7L1Q6 419 aaKnown RBP13.3□□□□□ -0.28
CAPN1-208ENST00000527323 GRK7Q8WTQ7 553 aa13.3□□□□□ -0.28
CAPN1-208ENST00000527323 KIFAP3Q92845 792 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms