RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 TPCN2Q8NHX9 752 aa17.39■□□□□ 0.37
SNRNP35-204ENST00000527158 RFFLQ8WZ73 363 aa17.39■□□□□ 0.37
SNRNP35-204ENST00000527158 KAT2BQ92831 832 aa17.39■□□□□ 0.37
SNRNP35-204ENST00000527158 LENG1Q96BZ8 264 aaPredicted RBP17.39■□□□□ 0.37
SNRNP35-204ENST00000527158 MMS19Q96T76 1030 aa17.39■□□□□ 0.37
SNRNP35-204ENST00000527158 MTMR12Q9C0I1 747 aa17.39■□□□□ 0.37
SNRNP35-204ENST00000527158 VIPAS39Q9H9C1 493 aa17.39■□□□□ 0.37
SNRNP35-204ENST00000527158 B4GALT4O60513 344 aa17.39■□□□□ 0.37
SNRNP35-204ENST00000527158 TNNC2P02585 160 aa17.39■□□□□ 0.37
SNRNP35-204ENST00000527158 TMEM191BP0C7N4 346 aa17.39■□□□□ 0.37
SNRNP35-204ENST00000527158 CHRNB2P17787 502 aa17.39■□□□□ 0.37
SNRNP35-204ENST00000527158 TFAMQ00059 246 aaKnown RBP17.39■□□□□ 0.37
SNRNP35-204ENST00000527158 TRPC3Q13507 836 aa17.39■□□□□ 0.37
SNRNP35-204ENST00000527158 SLC35G2Q8TBE7 412 aa17.39■□□□□ 0.37
SNRNP35-204ENST00000527158 ANKRD36BP1Q96IX9 119 aa17.39■□□□□ 0.37
SNRNP35-204ENST00000527158 ACP6Q9NPH0 428 aa17.39■□□□□ 0.37
SNRNP35-204ENST00000527158 MED4Q9NPJ6 270 aa17.39■□□□□ 0.37
SNRNP35-204ENST00000527158 CWC15Q9P013 229 aaKnown RBP17.39■□□□□ 0.37
SNRNP35-204ENST00000527158 PCDHB2Q9Y5E7 798 aa17.39■□□□□ 0.37
SNRNP35-204ENST00000527158 NCANO14594 1321 aa17.39■□□□□ 0.37
SNRNP35-204ENST00000527158 ERICH4A6NGS2 130 aa17.38■□□□□ 0.37
SNRNP35-204ENST00000527158 GPR25O00155 361 aa17.38■□□□□ 0.37
SNRNP35-204ENST00000527158 MMEP08473 750 aa17.38■□□□□ 0.37
SNRNP35-204ENST00000527158 MYL3P08590 195 aa17.38■□□□□ 0.37
SNRNP35-204ENST00000527158 CLTAP09496 248 aa17.38■□□□□ 0.37
SNRNP35-204ENST00000527158 ARF4P18085 180 aaPredicted RBP17.38■□□□□ 0.37
SNRNP35-204ENST00000527158 POU5F1Q01860 360 aaKnown RBP17.38■□□□□ 0.37
SNRNP35-204ENST00000527158 CCDC181Q5TID7 509 aa17.38■□□□□ 0.37
SNRNP35-204ENST00000527158 CREG2Q8IUH2 290 aa17.38■□□□□ 0.37
SNRNP35-204ENST00000527158 CEP120Q8N960 986 aa17.38■□□□□ 0.37
SNRNP35-204ENST00000527158 RUBCNQ92622 972 aa17.38■□□□□ 0.37
SNRNP35-204ENST00000527158 CPB2Q96IY4 423 aa17.38■□□□□ 0.37
SNRNP35-204ENST00000527158 CALR3Q96L12 384 aaKnown RBP17.38■□□□□ 0.37
SNRNP35-204ENST00000527158 ZIC5Q96T25 663 aa17.38■□□□□ 0.37
SNRNP35-204ENST00000527158 PSMB7Q99436 277 aa17.38■□□□□ 0.37
SNRNP35-204ENST00000527158 THAP2Q9H0W7 228 aa17.38■□□□□ 0.37
SNRNP35-204ENST00000527158 PDZD7Q9H5P4 517 aa17.38■□□□□ 0.37
SNRNP35-204ENST00000527158 APOBEC3GQ9HC16 384 aaKnown RBP17.38■□□□□ 0.37
SNRNP35-204ENST00000527158 DOCK3Q8IZD9 2030 aa17.38■□□□□ 0.37
SNRNP35-204ENST00000527158 CST3P01034 146 aaPredicted RBP17.38■□□□□ 0.37
SNRNP35-204ENST00000527158 IGHA2P01877 340 aa17.38■□□□□ 0.37
SNRNP35-204ENST00000527158 STAG3L1P0CL83 205 aa17.38■□□□□ 0.37
SNRNP35-204ENST00000527158 AKR1A1P14550 325 aa17.38■□□□□ 0.37
SNRNP35-204ENST00000527158 PAFAH1B1P43034 410 aa17.38■□□□□ 0.37
SNRNP35-204ENST00000527158 PSEN2P49810 448 aa17.38■□□□□ 0.37
SNRNP35-204ENST00000527158 FMO1Q01740 532 aa17.38■□□□□ 0.37
SNRNP35-204ENST00000527158 SGSM1Q2NKQ1 1148 aa17.38■□□□□ 0.37
SNRNP35-204ENST00000527158 HSP90B2PQ58FF3 399 aa17.38■□□□□ 0.37
SNRNP35-204ENST00000527158 ZNF677Q86XU0 584 aa17.38■□□□□ 0.37
SNRNP35-204ENST00000527158 RHOT2Q8IXI1 618 aa17.38■□□□□ 0.37
SNRNP35-204ENST00000527158 LRRC57Q8N9N7 239 aa17.38■□□□□ 0.37
SNRNP35-204ENST00000527158 COG1Q8WTW3 980 aa17.38■□□□□ 0.37
SNRNP35-204ENST00000527158 TAF4BQ92750 862 aa17.38■□□□□ 0.37
SNRNP35-204ENST00000527158 PNKPQ96T60 521 aa17.38■□□□□ 0.37
SNRNP35-204ENST00000527158 PCDHB18PQ96TA0 734 aa17.38■□□□□ 0.37
SNRNP35-204ENST00000527158 ADPGKQ9BRR6 497 aa17.38■□□□□ 0.37
SNRNP35-204ENST00000527158 KATNAL1Q9BW62 490 aa17.38■□□□□ 0.37
SNRNP35-204ENST00000527158 GCOM2Q9BZD3 368 aaPredicted RBP17.38■□□□□ 0.37
SNRNP35-204ENST00000527158 FAM49AQ9H0Q0 323 aaPredicted RBP17.38■□□□□ 0.37
SNRNP35-204ENST00000527158 RNF14Q9UBS8 474 aa17.38■□□□□ 0.37
SNRNP35-204ENST00000527158 SMIM35A0A1B0GVV1 85 aa17.37■□□□□ 0.37
SNRNP35-204ENST00000527158 ASS1P00966 412 aaKnown RBP17.37■□□□□ 0.37
SNRNP35-204ENST00000527158 CXCR5P32302 372 aa17.37■□□□□ 0.37
SNRNP35-204ENST00000527158 PSMC4P43686 418 aa17.37■□□□□ 0.37
SNRNP35-204ENST00000527158 GPC5P78333 572 aa17.37■□□□□ 0.37
SNRNP35-204ENST00000527158 RPS6KA1Q15418 735 aa17.37■□□□□ 0.37
SNRNP35-204ENST00000527158 KIZQ2M2Z5 673 aa17.37■□□□□ 0.37
SNRNP35-204ENST00000527158 DAAM2Q86T65 1068 aa17.37■□□□□ 0.37
SNRNP35-204ENST00000527158 FAM71BQ8TC56 605 aa17.37■□□□□ 0.37
SNRNP35-204ENST00000527158 ABCB6Q9NP58 842 aa17.37■□□□□ 0.37
SNRNP35-204ENST00000527158 NUB1Q9Y5A7 615 aa17.37■□□□□ 0.37
SNRNP35-204ENST00000527158 PCDHB4Q9Y5E5 795 aa17.37■□□□□ 0.37
SNRNP35-204ENST00000527158 MBLAC1A4D2B0 266 aaPredicted RBP17.36■□□□□ 0.37
SNRNP35-204ENST00000527158 TSPAN1O60635 241 aa17.36■□□□□ 0.37
SNRNP35-204ENST00000527158 CXCL8P10145 99 aa17.36■□□□□ 0.37
SNRNP35-204ENST00000527158 CYP2C9P11712 490 aa17.36■□□□□ 0.37
SNRNP35-204ENST00000527158 CTGFP29279 349 aa17.36■□□□□ 0.37
SNRNP35-204ENST00000527158 BEX3Q00994 111 aa17.36■□□□□ 0.37
SNRNP35-204ENST00000527158 FSCN1Q16658 493 aaKnown RBP17.36■□□□□ 0.37
SNRNP35-204ENST00000527158 DDX1Q92499 740 aaKnown RBP17.36■□□□□ 0.37
SNRNP35-204ENST00000527158 TSPYL1Q9H0U9 437 aa17.36■□□□□ 0.37
SNRNP35-204ENST00000527158 ADAM21Q9UKJ8 722 aa17.36■□□□□ 0.37
SNRNP35-204ENST00000527158 GINS2Q9Y248 185 aa17.36■□□□□ 0.37
SNRNP35-204ENST00000527158 MYH10P35580 1976 aa17.36■□□□□ 0.37
SNRNP35-204ENST00000527158 A0A1B0GUA9 196 aa17.36■□□□□ 0.37
SNRNP35-204ENST00000527158 HAS3O00219 553 aa17.36■□□□□ 0.37
SNRNP35-204ENST00000527158 ACO1P21399 889 aaKnown RBP17.36■□□□□ 0.37
SNRNP35-204ENST00000527158 MYL6P60660 151 aa17.36■□□□□ 0.37
SNRNP35-204ENST00000527158 MFSD14CQ5VZR4 134 aa17.36■□□□□ 0.37
SNRNP35-204ENST00000527158 CCDC70Q6NSX1 233 aa17.36■□□□□ 0.37
SNRNP35-204ENST00000527158 CYP4F22Q6NT55 531 aa17.36■□□□□ 0.37
SNRNP35-204ENST00000527158 PEX26Q7Z412 305 aa17.36■□□□□ 0.37
SNRNP35-204ENST00000527158 APBB1IPQ7Z5R6 666 aaPredicted RBP17.36■□□□□ 0.37
SNRNP35-204ENST00000527158 SLFN11Q7Z7L1 901 aa17.36■□□□□ 0.37
SNRNP35-204ENST00000527158 ADAMTS10Q9H324 1103 aa17.36■□□□□ 0.37
SNRNP35-204ENST00000527158 OSGEPQ9NPF4 335 aa17.36■□□□□ 0.37
SNRNP35-204ENST00000527158 ZSWIM8A7E2V4 1837 aa17.35■□□□□ 0.37
SNRNP35-204ENST00000527158 RHOXF2BP0C7M4 288 aa17.35■□□□□ 0.37
SNRNP35-204ENST00000527158 VSNL1P62760 191 aa17.35■□□□□ 0.37
SNRNP35-204ENST00000527158 IRX5P78411 483 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms