RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 HAUS3Q68CZ6 603 aa17.68■□□□□ 0.42
PTPRU-210ENST00000527027 CCDC94Q9BW85 323 aaPredicted RBP17.68■□□□□ 0.42
PTPRU-210ENST00000527027 BHMT2Q9H2M3 363 aa17.68■□□□□ 0.42
PTPRU-210ENST00000527027 SLC38A7Q9NVC3 462 aa17.68■□□□□ 0.42
PTPRU-210ENST00000527027 VWA8A3KMH1 1905 aa17.68■□□□□ 0.42
PTPRU-210ENST00000527027 COL4A3Q01955 1670 aa17.67■□□□□ 0.42
PTPRU-210ENST00000527027 NOTCH4Q99466 2003 aa17.67■□□□□ 0.42
PTPRU-210ENST00000527027 WDR27A2RRH5 827 aa17.67■□□□□ 0.42
PTPRU-210ENST00000527027 SHISA7A6NL88 538 aa17.67■□□□□ 0.42
PTPRU-210ENST00000527027 ZNF197O14709 1029 aa17.67■□□□□ 0.42
PTPRU-210ENST00000527027 TBC1D4O60343 1298 aa17.67■□□□□ 0.42
PTPRU-210ENST00000527027 LILRB5O75023 590 aa17.67■□□□□ 0.42
PTPRU-210ENST00000527027 MICAL2O94851 1124 aa17.67■□□□□ 0.42
PTPRU-210ENST00000527027 SDHBP21912 280 aa17.67■□□□□ 0.42
PTPRU-210ENST00000527027 CCT6AP40227 531 aaKnown RBP17.67■□□□□ 0.42
PTPRU-210ENST00000527027 NEK4P51957 841 aa17.67■□□□□ 0.42
PTPRU-210ENST00000527027 ECM1Q16610 540 aa17.67■□□□□ 0.42
PTPRU-210ENST00000527027 TCEAL8Q8IYN2 117 aa17.67■□□□□ 0.42
PTPRU-210ENST00000527027 CEP120Q8N960 986 aa17.67■□□□□ 0.42
PTPRU-210ENST00000527027 DNASE1L2Q92874 299 aa17.67■□□□□ 0.42
PTPRU-210ENST00000527027 SECISBP2LQ93073 1101 aaKnown RBP17.67■□□□□ 0.42
PTPRU-210ENST00000527027 ACO2Q99798 780 aaKnown RBP17.67■□□□□ 0.42
PTPRU-210ENST00000527027 CORO1BQ9BR76 489 aa17.67■□□□□ 0.42
PTPRU-210ENST00000527027 ZFP14Q9HCL3 533 aa17.67■□□□□ 0.42
PTPRU-210ENST00000527027 PTPRHQ9HD43 1115 aa17.67■□□□□ 0.42
PTPRU-210ENST00000527027 CCDC169A6NNP5 214 aa17.66■□□□□ 0.42
PTPRU-210ENST00000527027 H7C4K7 107 aa17.66■□□□□ 0.42
PTPRU-210ENST00000527027 PODXLO00592 558 aa17.66■□□□□ 0.42
PTPRU-210ENST00000527027 MAN2B1O00754 1011 aa17.66■□□□□ 0.42
PTPRU-210ENST00000527027 SYN3O14994 580 aa17.66■□□□□ 0.42
PTPRU-210ENST00000527027 FCARP24071 287 aa17.66■□□□□ 0.42
PTPRU-210ENST00000527027 ARPP19P56211 112 aa17.66■□□□□ 0.42
PTPRU-210ENST00000527027 OSTNP61366 133 aa17.66■□□□□ 0.42
PTPRU-210ENST00000527027 MRPL58Q14197 206 aaKnown RBP17.66■□□□□ 0.42
PTPRU-210ENST00000527027 PRSS36Q5K4E3 855 aa17.66■□□□□ 0.42
PTPRU-210ENST00000527027 TPGS2Q68CL5 300 aa17.66■□□□□ 0.42
PTPRU-210ENST00000527027 TSSK4Q6SA08 328 aa17.66■□□□□ 0.42
PTPRU-210ENST00000527027 TCEAL4Q96EI5 215 aa17.66■□□□□ 0.42
PTPRU-210ENST00000527027 ZMAT2Q96NC0 199 aaKnown RBP17.66■□□□□ 0.42
PTPRU-210ENST00000527027 TRMT61BQ9BVS5 477 aaKnown RBP17.66■□□□□ 0.42
PTPRU-210ENST00000527027 FAM126AQ9BYI3 521 aaPredicted RBP17.66■□□□□ 0.42
PTPRU-210ENST00000527027 CDT1Q9H211 546 aa17.66■□□□□ 0.42
PTPRU-210ENST00000527027 EPC1Q9H2F5 836 aa17.66■□□□□ 0.42
PTPRU-210ENST00000527027 BRD9Q9H8M2 597 aa17.66■□□□□ 0.42
PTPRU-210ENST00000527027 CYP4F11Q9HBI6 524 aa17.66■□□□□ 0.42
PTPRU-210ENST00000527027 PRMT8Q9NR22 394 aaPredicted RBP17.66■□□□□ 0.42
PTPRU-210ENST00000527027 KIAA1024Q9UPX6 916 aa17.66■□□□□ 0.42
PTPRU-210ENST00000527027 MIA3Q5JRA6 1907 aa17.66■□□□□ 0.42
PTPRU-210ENST00000527027 SEC24AO95486 1093 aa17.65■□□□□ 0.42
PTPRU-210ENST00000527027 KCNE1P15382 129 aa17.65■□□□□ 0.42
PTPRU-210ENST00000527027 RPL9P32969 192 aaKnown RBP17.65■□□□□ 0.42
PTPRU-210ENST00000527027 NPTX2P47972 431 aa17.65■□□□□ 0.42
PTPRU-210ENST00000527027 FXR2P51116 673 aaKnown RBP eCLIP17.65■□□□□ 0.42
PTPRU-210ENST00000527027 MTAPQ13126 283 aa17.65■□□□□ 0.42
PTPRU-210ENST00000527027 ZNF568Q3ZCX4 644 aa17.65■□□□□ 0.42
PTPRU-210ENST00000527027 FAM78AQ5JUQ0 283 aa17.65■□□□□ 0.42
PTPRU-210ENST00000527027 CYP4A22Q5TCH4 519 aa17.65■□□□□ 0.42
PTPRU-210ENST00000527027 ERICH6BQ5W0A0 696 aa17.65■□□□□ 0.42
PTPRU-210ENST00000527027 C8orf76Q96K31 380 aa17.65■□□□□ 0.42
PTPRU-210ENST00000527027 ACAP3Q96P50 834 aa17.65■□□□□ 0.42
PTPRU-210ENST00000527027 MRPL4Q9BYD3 311 aaKnown RBP17.65■□□□□ 0.42
PTPRU-210ENST00000527027 FOXP1Q9H334 677 aaPredicted RBP17.65■□□□□ 0.42
PTPRU-210ENST00000527027 TMEM134Q9H6X4 195 aa17.65■□□□□ 0.42
PTPRU-210ENST00000527027 LRWD1Q9UFC0 647 aa17.65■□□□□ 0.42
PTPRU-210ENST00000527027 FBXL5Q9UKA1 691 aa17.65■□□□□ 0.42
PTPRU-210ENST00000527027 SMG5Q9UPR3 1016 aaKnown RBP17.65■□□□□ 0.42
PTPRU-210ENST00000527027 NUB1Q9Y5A7 615 aa17.65■□□□□ 0.42
PTPRU-210ENST00000527027 INSL5Q9Y5Q6 135 aa17.65■□□□□ 0.42
PTPRU-210ENST00000527027 MCF2P10911 925 aa17.64■□□□□ 0.41
PTPRU-210ENST00000527027 CCR2P41597 374 aa17.64■□□□□ 0.41
PTPRU-210ENST00000527027 PEX3P56589 373 aa17.64■□□□□ 0.41
PTPRU-210ENST00000527027 ST3GAL1Q11201 340 aa17.64■□□□□ 0.41
PTPRU-210ENST00000527027 GRM2Q14416 872 aa17.64■□□□□ 0.41
PTPRU-210ENST00000527027 PDIA5Q14554 519 aa17.64■□□□□ 0.41
PTPRU-210ENST00000527027 TTC38Q5R3I4 469 aa17.64■□□□□ 0.41
PTPRU-210ENST00000527027 IQCEQ6IPM2 695 aa17.64■□□□□ 0.41
PTPRU-210ENST00000527027 MAMSTRQ6ZN01 415 aa17.64■□□□□ 0.41
PTPRU-210ENST00000527027 PDZD4Q76G19 769 aaPredicted RBP17.64■□□□□ 0.41
PTPRU-210ENST00000527027 ZNF687Q8N1G0 1237 aa17.64■□□□□ 0.41
PTPRU-210ENST00000527027 C4orf32Q8N8J7 132 aa17.64■□□□□ 0.41
PTPRU-210ENST00000527027 IRF7Q92985 503 aa17.64■□□□□ 0.41
PTPRU-210ENST00000527027 ZNF512Q96ME7 567 aaPredicted RBP17.64■□□□□ 0.41
PTPRU-210ENST00000527027 ASB16Q96NS5 453 aa17.64■□□□□ 0.41
PTPRU-210ENST00000527027 TCHPQ9BT92 498 aa17.64■□□□□ 0.41
PTPRU-210ENST00000527027 TARS2Q9BW92 718 aaKnown RBP17.64■□□□□ 0.41
PTPRU-210ENST00000527027 DDX19AQ9NUU7 478 aaKnown RBP17.64■□□□□ 0.41
PTPRU-210ENST00000527027 NDRG2Q9UN36 371 aaKnown RBP17.64■□□□□ 0.41
PTPRU-210ENST00000527027 RBM19Q9Y4C8 960 aaKnown RBP17.64■□□□□ 0.41
PTPRU-210ENST00000527027 PHLPP2Q6ZVD8 1323 aa17.64■□□□□ 0.41
PTPRU-210ENST00000527027 F5P12259 2224 aa17.64■□□□□ 0.41
PTPRU-210ENST00000527027 PRR5-ARHGAP8B1AHC4 643 aa17.63■□□□□ 0.41
PTPRU-210ENST00000527027 TRAPPC10P48553 1259 aa17.63■□□□□ 0.41
PTPRU-210ENST00000527027 NRLP54845 237 aa17.63■□□□□ 0.41
PTPRU-210ENST00000527027 ARHGAP8P85298 464 aa17.63■□□□□ 0.41
PTPRU-210ENST00000527027 CTXN3Q4LDR2 81 aa17.63■□□□□ 0.41
PTPRU-210ENST00000527027 TAS1R3Q7RTX0 852 aa17.63■□□□□ 0.41
PTPRU-210ENST00000527027 MAP4K3Q8IVH8 894 aa17.63■□□□□ 0.41
PTPRU-210ENST00000527027 ELMOD1Q8N336 334 aa17.63■□□□□ 0.41
PTPRU-210ENST00000527027 C18orf25Q96B23 403 aaPredicted RBP17.63■□□□□ 0.41
PTPRU-210ENST00000527027 SUSD3Q96L08 255 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms