RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 OTOFQ9HC10 1997 aa18.78■□□□□ 0.6
USH1C-205ENST00000527020 CAND2O75155 1236 aa18.78■□□□□ 0.6
USH1C-205ENST00000527020 UBA1P22314 1058 aaKnown RBP18.78■□□□□ 0.6
USH1C-205ENST00000527020 TMOD1P28289 359 aa18.78■□□□□ 0.6
USH1C-205ENST00000527020 PRKG1Q13976 671 aa18.78■□□□□ 0.6
USH1C-205ENST00000527020 TARBP2Q15633 366 aaKnown RBP18.78■□□□□ 0.6
USH1C-205ENST00000527020 NLRP14Q86W24 1093 aa18.78■□□□□ 0.6
USH1C-205ENST00000527020 ART4Q93070 314 aa18.78■□□□□ 0.6
USH1C-205ENST00000527020 CCT8L2Q96SF2 557 aa18.78■□□□□ 0.6
USH1C-205ENST00000527020 MTFR1LQ9H019 292 aa18.78■□□□□ 0.6
USH1C-205ENST00000527020 FBXO40Q9UH90 709 aa18.78■□□□□ 0.6
USH1C-205ENST00000527020 UMODL1Q5DID0 1318 aa18.77■□□□□ 0.6
USH1C-205ENST00000527020 TP73O15350 636 aa18.77■□□□□ 0.6
USH1C-205ENST00000527020 USP2O75604 605 aaPredicted RBP18.77■□□□□ 0.6
USH1C-205ENST00000527020 GBP1P32455 592 aa18.77■□□□□ 0.6
USH1C-205ENST00000527020 MAGEA9P43362 315 aa18.77■□□□□ 0.6
USH1C-205ENST00000527020 IFFO1Q0D2I5 559 aa18.77■□□□□ 0.6
USH1C-205ENST00000527020 CUL2Q13617 745 aa18.77■□□□□ 0.6
USH1C-205ENST00000527020 ANKRD35Q8N283 1001 aa18.77■□□□□ 0.6
USH1C-205ENST00000527020 OR5B17Q8NGF7 314 aa18.77■□□□□ 0.6
USH1C-205ENST00000527020 RUNDC3BQ96NL0 473 aa18.77■□□□□ 0.6
USH1C-205ENST00000527020 MSTO1Q9BUK6 570 aa18.77■□□□□ 0.6
USH1C-205ENST00000527020 SEMA4AQ9H3S1 761 aa18.77■□□□□ 0.6
USH1C-205ENST00000527020 GPRC5DQ9NZD1 345 aa18.77■□□□□ 0.6
USH1C-205ENST00000527020 BTBD7Q9P203 1132 aa18.77■□□□□ 0.6
USH1C-205ENST00000527020 SNCAIPQ9Y6H5 919 aa18.77■□□□□ 0.6
USH1C-205ENST00000527020 FARP2O94887 1054 aaPredicted RBP18.76■□□□□ 0.59
USH1C-205ENST00000527020 MYBL1P10243 752 aa18.76■□□□□ 0.59
USH1C-205ENST00000527020 BPIFB4P59827 614 aa18.76■□□□□ 0.59
USH1C-205ENST00000527020 SLFN12LQ6IEE8 588 aa18.76■□□□□ 0.59
USH1C-205ENST00000527020 LBX2Q6XYB7 198 aa18.76■□□□□ 0.59
USH1C-205ENST00000527020 C1orf54Q8WWF1 131 aa18.76■□□□□ 0.59
USH1C-205ENST00000527020 SLC7A3Q8WY07 619 aa18.76■□□□□ 0.59
USH1C-205ENST00000527020 SLCO2A1Q92959 643 aa18.76■□□□□ 0.59
USH1C-205ENST00000527020 DDX27Q96GQ7 796 aaKnown RBP18.76■□□□□ 0.59
USH1C-205ENST00000527020 CGRRF1Q99675 332 aa18.76■□□□□ 0.59
USH1C-205ENST00000527020 PAGR1Q9BTK6 254 aa18.76■□□□□ 0.59
USH1C-205ENST00000527020 ANKFY1Q9P2R3 1169 aa18.76■□□□□ 0.59
USH1C-205ENST00000527020 PARP2Q9UGN5 583 aa18.76■□□□□ 0.59
USH1C-205ENST00000527020 TTLL13PA6NNM8 815 aa18.76■□□□□ 0.59
USH1C-205ENST00000527020 DRP2Q13474 957 aa18.76■□□□□ 0.59
USH1C-205ENST00000527020 CAPSQ13938 189 aa18.76■□□□□ 0.59
USH1C-205ENST00000527020 SLC29A2Q14542 456 aa18.76■□□□□ 0.59
USH1C-205ENST00000527020 DAB2IPQ5VWQ8 1189 aa18.76■□□□□ 0.59
USH1C-205ENST00000527020 CNTN6Q9UQ52 1028 aa18.76■□□□□ 0.59
USH1C-205ENST00000527020 NUB1Q9Y5A7 615 aa18.76■□□□□ 0.59
USH1C-205ENST00000527020 PASKQ96RG2 1323 aa18.76■□□□□ 0.59
USH1C-205ENST00000527020 FAM107AO95990 144 aa18.75■□□□□ 0.59
USH1C-205ENST00000527020 CLTAP09496 248 aa18.75■□□□□ 0.59
USH1C-205ENST00000527020 EDNRBP24530 442 aa18.75■□□□□ 0.59
USH1C-205ENST00000527020 NSFP46459 744 aaKnown RBP18.75■□□□□ 0.59
USH1C-205ENST00000527020 NOMO3P69849 1222 aa18.75■□□□□ 0.59
USH1C-205ENST00000527020 MKRN4PQ13434 485 aaPredicted RBP18.75■□□□□ 0.59
USH1C-205ENST00000527020 SEZ6Q53EL9 994 aa18.75■□□□□ 0.59
USH1C-205ENST00000527020 ODF2Q5BJF6 829 aa18.75■□□□□ 0.59
USH1C-205ENST00000527020 DENND2CQ68D51 928 aa18.75■□□□□ 0.59
USH1C-205ENST00000527020 DLK2Q6UY11 383 aa18.75■□□□□ 0.59
USH1C-205ENST00000527020 TRIM11Q96F44 468 aa18.75■□□□□ 0.59
USH1C-205ENST00000527020 TMEM134Q9H6X4 195 aa18.75■□□□□ 0.59
USH1C-205ENST00000527020 PPANQ9NQ55 473 aaKnown RBP18.75■□□□□ 0.59
USH1C-205ENST00000527020 PPP2R3BQ9Y5P8 575 aa18.75■□□□□ 0.59
USH1C-205ENST00000527020 SOWAHBA6NEL2 793 aa18.75■□□□□ 0.59
USH1C-205ENST00000527020 E7EVH7 732 aa18.75■□□□□ 0.59
USH1C-205ENST00000527020 O00370 1275 aa18.75■□□□□ 0.59
USH1C-205ENST00000527020 ECEL1O95672 775 aa18.75■□□□□ 0.59
USH1C-205ENST00000527020 PAEPP09466 180 aa18.75■□□□□ 0.59
USH1C-205ENST00000527020 SSTR3P32745 418 aaPredicted RBP18.75■□□□□ 0.59
USH1C-205ENST00000527020 SGO2Q562F6 1265 aa18.75■□□□□ 0.59
USH1C-205ENST00000527020 TMEM270Q6UE05 265 aa18.75■□□□□ 0.59
USH1C-205ENST00000527020 HOOK3Q86VS8 718 aa18.75■□□□□ 0.59
USH1C-205ENST00000527020 PASD1Q8IV76 773 aa18.75■□□□□ 0.59
USH1C-205ENST00000527020 ABRAQ8N0Z2 381 aa18.75■□□□□ 0.59
USH1C-205ENST00000527020 CNKSR2Q8WXI2 1034 aa18.75■□□□□ 0.59
USH1C-205ENST00000527020 CHST7Q9NS84 486 aa18.75■□□□□ 0.59
USH1C-205ENST00000527020 MTRF1LQ9UGC7 380 aaKnown RBP18.75■□□□□ 0.59
USH1C-205ENST00000527020 PCDHB4Q9Y5E5 795 aa18.75■□□□□ 0.59
USH1C-205ENST00000527020 MGAMO43451 1857 aa18.74■□□□□ 0.59
USH1C-205ENST00000527020 TRAPPC3O43617 180 aa18.74■□□□□ 0.59
USH1C-205ENST00000527020 LDHAP00338 332 aaKnown RBP18.74■□□□□ 0.59
USH1C-205ENST00000527020 FGFR4P22455 802 aa18.74■□□□□ 0.59
USH1C-205ENST00000527020 RFC5P40937 340 aa18.74■□□□□ 0.59
USH1C-205ENST00000527020 SLC1A1P43005 524 aa18.74■□□□□ 0.59
USH1C-205ENST00000527020 NOP14P78316 857 aaKnown RBP18.74■□□□□ 0.59
USH1C-205ENST00000527020 PTP4A2Q12974 167 aa18.74■□□□□ 0.59
USH1C-205ENST00000527020 VGLL4Q14135 290 aa18.74■□□□□ 0.59
USH1C-205ENST00000527020 ZNF568Q3ZCX4 644 aa18.74■□□□□ 0.59
USH1C-205ENST00000527020 B4GALNT4Q76KP1 1039 aa18.74■□□□□ 0.59
USH1C-205ENST00000527020 ATG4AQ8WYN0 398 aa18.74■□□□□ 0.59
USH1C-205ENST00000527020 PGM2Q96G03 612 aa18.74■□□□□ 0.59
USH1C-205ENST00000527020 C11orf70Q9BRQ4 267 aa18.74■□□□□ 0.59
USH1C-205ENST00000527020 FAM107BQ9H098 131 aa18.74■□□□□ 0.59
USH1C-205ENST00000527020 DICER1Q9UPY3 1922 aaKnown RBP18.74■□□□□ 0.59
USH1C-205ENST00000527020 ADCY3O60266 1144 aa18.74■□□□□ 0.59
USH1C-205ENST00000527020 FAM189A1O60320 539 aa18.74■□□□□ 0.59
USH1C-205ENST00000527020 PROSCO94903 275 aa18.74■□□□□ 0.59
USH1C-205ENST00000527020 GNA15P30679 374 aa18.74■□□□□ 0.59
USH1C-205ENST00000527020 KRT17Q04695 432 aa18.74■□□□□ 0.59
USH1C-205ENST00000527020 SNX1Q13596 522 aa18.74■□□□□ 0.59
USH1C-205ENST00000527020 RIOX2Q8IUF8 465 aa18.74■□□□□ 0.59
USH1C-205ENST00000527020 RBBP8NLQ8NC74 664 aaPredicted RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms