RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 CLEC4GQ6UXB4 293 aa5.49□□□□□ -1.53
USP48-211ENST00000526044 TMEM57Q8N5G2 664 aa5.49□□□□□ -1.53
USP48-211ENST00000526044 LINS1Q8NG48 757 aa5.49□□□□□ -1.53
USP48-211ENST00000526044 WDR92Q96MX6 357 aa5.49□□□□□ -1.53
USP48-211ENST00000526044 SAMD11Q96NU1 681 aa5.49□□□□□ -1.53
USP48-211ENST00000526044 MYD88Q99836 296 aa5.49□□□□□ -1.53
USP48-211ENST00000526044 NOL10Q9BSC4 688 aaKnown RBP5.49□□□□□ -1.53
USP48-211ENST00000526044 HAPLN2Q9GZV7 340 aa5.49□□□□□ -1.53
USP48-211ENST00000526044 MEGF9Q9H1U4 602 aa5.49□□□□□ -1.53
USP48-211ENST00000526044 MS4A5Q9H3V2 200 aa5.49□□□□□ -1.53
USP48-211ENST00000526044 CHMP4BQ9H444 224 aaKnown RBP5.49□□□□□ -1.53
USP48-211ENST00000526044 POLR3BQ9NW08 1133 aaPredicted RBP5.49□□□□□ -1.53
USP48-211ENST00000526044 SRP68Q9UHB9 627 aaKnown RBP5.49□□□□□ -1.53
USP48-211ENST00000526044 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.49□□□□□ -1.53
USP48-211ENST00000526044 TNNQ9UQP3 1299 aa5.49□□□□□ -1.53
USP48-211ENST00000526044 COL15A1P39059 1388 aa5.49□□□□□ -1.53
USP48-211ENST00000526044 RREB1Q92766 1687 aa5.49□□□□□ -1.53
USP48-211ENST00000526044 UBR3Q6ZT12 1888 aa5.48□□□□□ -1.53
USP48-211ENST00000526044 ADCY9O60503 1353 aa5.48□□□□□ -1.53
USP48-211ENST00000526044 PRSS38A1L453 326 aa5.48□□□□□ -1.53
USP48-211ENST00000526044 LCHNA4D1U4 455 aa5.48□□□□□ -1.53
USP48-211ENST00000526044 GPR42O15529 346 aa5.48□□□□□ -1.53
USP48-211ENST00000526044 DAPK3O43293 454 aa5.48□□□□□ -1.53
USP48-211ENST00000526044 KDM1AO60341 852 aa5.48□□□□□ -1.53
USP48-211ENST00000526044 ALDH1L1O75891 902 aa5.48□□□□□ -1.53
USP48-211ENST00000526044 PCDH8O95206 1070 aa5.48□□□□□ -1.53
USP48-211ENST00000526044 EYA4O95677 639 aa5.48□□□□□ -1.53
USP48-211ENST00000526044 GPTP24298 496 aa5.48□□□□□ -1.53
USP48-211ENST00000526044 MAGEA10P43363 369 aaPredicted RBP5.48□□□□□ -1.53
USP48-211ENST00000526044 IRX6P78412 446 aaPredicted RBP5.48□□□□□ -1.53
USP48-211ENST00000526044 HGFACQ04756 655 aa5.48□□□□□ -1.53
USP48-211ENST00000526044 FAPQ12884 760 aa5.48□□□□□ -1.53
USP48-211ENST00000526044 STAT4Q14765 748 aa5.48□□□□□ -1.53
USP48-211ENST00000526044 MAN2A1Q16706 1144 aa5.48□□□□□ -1.53
USP48-211ENST00000526044 BEND3Q5T5X7 828 aa5.48□□□□□ -1.53
USP48-211ENST00000526044 TAX1BP1Q86VP1 789 aa5.48□□□□□ -1.53
USP48-211ENST00000526044 CXorf67Q86X51 503 aaPredicted RBP5.48□□□□□ -1.53
USP48-211ENST00000526044 ITPRIPQ8IWB1 547 aa5.48□□□□□ -1.53
USP48-211ENST00000526044 ZNF34Q8IZ26 560 aa5.48□□□□□ -1.53
USP48-211ENST00000526044 CCDC191Q8NCU4 936 aa5.48□□□□□ -1.53
USP48-211ENST00000526044 GIMAP8Q8ND71 665 aaPredicted RBP5.48□□□□□ -1.53
USP48-211ENST00000526044 NKD2Q969F2 451 aaPredicted RBP5.48□□□□□ -1.53
USP48-211ENST00000526044 LOXL4Q96JB6 756 aa5.48□□□□□ -1.53
USP48-211ENST00000526044 HIST1H2AHQ96KK5 128 aa5.48□□□□□ -1.53
USP48-211ENST00000526044 GNRHR2Q96P88 292 aa5.48□□□□□ -1.53
USP48-211ENST00000526044 HIST1H2AJQ99878 128 aa5.48□□□□□ -1.53
USP48-211ENST00000526044 ISCA1Q9BUE6 129 aa5.48□□□□□ -1.53
USP48-211ENST00000526044 WNT8AQ9H1J5 351 aa5.48□□□□□ -1.53
USP48-211ENST00000526044 C12orf65Q9H3J6 166 aaKnown RBP5.48□□□□□ -1.53
USP48-211ENST00000526044 MSL2Q9HCI7 577 aa5.48□□□□□ -1.53
USP48-211ENST00000526044 CWC25Q9NXE8 425 aaPredicted RBP5.48□□□□□ -1.53
USP48-211ENST00000526044 C9orf78Q9NZ63 289 aaPredicted RBP5.48□□□□□ -1.53
USP48-211ENST00000526044 OAZ3Q9UMX2 235 aa5.48□□□□□ -1.53
USP48-211ENST00000526044 HDAC5Q9UQL6 1122 aa5.48□□□□□ -1.53
USP48-211ENST00000526044 NIP7Q9Y221 180 aaKnown RBP eCLIP5.48□□□□□ -1.53
USP48-211ENST00000526044 CTDP1Q9Y5B0 961 aaPredicted RBP5.48□□□□□ -1.53
USP48-211ENST00000526044 ABCC4O15439 1325 aa5.48□□□□□ -1.53
USP48-211ENST00000526044 PNPLA7Q6ZV29 1317 aa5.48□□□□□ -1.53
USP48-211ENST00000526044 MATN2O00339 956 aa5.47□□□□□ -1.53
USP48-211ENST00000526044 CDC14BO60729 498 aa5.47□□□□□ -1.53
USP48-211ENST00000526044 IGKV5-2P06315 115 aa5.47□□□□□ -1.53
USP48-211ENST00000526044 GNAI3P08754 354 aa5.47□□□□□ -1.53
USP48-211ENST00000526044 GYS1P13807 737 aa5.47□□□□□ -1.53
USP48-211ENST00000526044 TM4SF1P30408 202 aa5.47□□□□□ -1.53
USP48-211ENST00000526044 GCKRQ14397 625 aa5.47□□□□□ -1.53
USP48-211ENST00000526044 MVPQ14764 893 aaKnown RBP5.47□□□□□ -1.53
USP48-211ENST00000526044 PARP10Q53GL7 1025 aa5.47□□□□□ -1.53
USP48-211ENST00000526044 ZBTB41Q5SVQ8 909 aa5.47□□□□□ -1.53
USP48-211ENST00000526044 TBC1D9BQ66K14 1250 aa5.47□□□□□ -1.53
USP48-211ENST00000526044 PPP1R42Q7Z4L9 355 aa5.47□□□□□ -1.53
USP48-211ENST00000526044 ANKRD13AQ8IZ07 590 aa5.47□□□□□ -1.53
USP48-211ENST00000526044 TTC9BQ8N6N2 239 aa5.47□□□□□ -1.53
USP48-211ENST00000526044 CDYL2Q8N8U2 506 aa5.47□□□□□ -1.53
USP48-211ENST00000526044 CLRN3Q8NCR9 226 aa5.47□□□□□ -1.53
USP48-211ENST00000526044 OR14K1Q8NGZ2 314 aa5.47□□□□□ -1.53
USP48-211ENST00000526044 ATL2Q8NHH9 583 aa5.47□□□□□ -1.53
USP48-211ENST00000526044 WDR66Q8TBY9 1149 aa5.47□□□□□ -1.53
USP48-211ENST00000526044 RSAD2Q8WXG1 361 aa5.47□□□□□ -1.53
USP48-211ENST00000526044 GCDHQ92947 438 aaPredicted RBP5.47□□□□□ -1.53
USP48-211ENST00000526044 SLC7A6OSQ96CW6 309 aaPredicted RBP5.47□□□□□ -1.53
USP48-211ENST00000526044 ANO3Q9BYT9 981 aa5.47□□□□□ -1.53
USP48-211ENST00000526044 OSBPL6Q9BZF3 934 aa5.47□□□□□ -1.53
USP48-211ENST00000526044 DNAI1Q9UI46 699 aa5.47□□□□□ -1.53
USP48-211ENST00000526044 DDX19BQ9UMR2 479 aa5.47□□□□□ -1.53
USP48-211ENST00000526044 PCDHB6Q9Y5E3 794 aa5.47□□□□□ -1.53
USP48-211ENST00000526044 NUMBLQ9Y6R0 609 aa5.47□□□□□ -1.53
USP48-211ENST00000526044 NUP188Q5SRE5 1749 aa5.47□□□□□ -1.53
USP48-211ENST00000526044 ARFGEF2Q9Y6D5 1785 aa5.47□□□□□ -1.53
USP48-211ENST00000526044 USP42Q9H9J4 1324 aaKnown RBP5.47□□□□□ -1.53
USP48-211ENST00000526044 AFDNP55196 1824 aaKnown RBP5.46□□□□□ -1.53
USP48-211ENST00000526044 EP400Q96L91 3159 aa5.46□□□□□ -1.54
USP48-211ENST00000526044 PMS2P1A4D2B8 440 aa5.46□□□□□ -1.54
USP48-211ENST00000526044 C2orf78A6NCI8 922 aa5.46□□□□□ -1.54
USP48-211ENST00000526044 GRM8O00222 908 aa5.46□□□□□ -1.54
USP48-211ENST00000526044 NPHP1O15259 732 aa5.46□□□□□ -1.54
USP48-211ENST00000526044 PFKMP08237 780 aa5.46□□□□□ -1.54
USP48-211ENST00000526044 GPR15P49685 360 aa5.46□□□□□ -1.54
USP48-211ENST00000526044 ADCY7P51828 1080 aa5.46□□□□□ -1.54
USP48-211ENST00000526044 MANFP55145 182 aaKnown RBP5.46□□□□□ -1.54
USP48-211ENST00000526044 ATP2C1P98194 919 aaPredicted RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms