RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 STX1AQ16623 288 aa22.47■■□□□ 1.19
CD44-222ENST00000526025 DCLRE1AQ6PJP8 1040 aa22.47■■□□□ 1.19
CD44-222ENST00000526025 FAM186BQ8IYM0 893 aa22.47■■□□□ 1.19
CD44-222ENST00000526025 PARD3BQ8TEW8 1205 aa22.47■■□□□ 1.19
CD44-222ENST00000526025 FNBP1Q96RU3 617 aa22.47■■□□□ 1.19
CD44-222ENST00000526025 INTS13Q9NVM9 706 aa22.47■■□□□ 1.19
CD44-222ENST00000526025 LMCD1Q9NZU5 365 aa22.47■■□□□ 1.19
CD44-222ENST00000526025 TUBGCP4Q9UGJ1 667 aa22.47■■□□□ 1.19
CD44-222ENST00000526025 EPOPA6NHQ4 379 aa22.46■■□□□ 1.19
CD44-222ENST00000526025 CASTOR2A6NHX0 329 aa22.46■■□□□ 1.19
CD44-222ENST00000526025 FGFR1OPO95684 399 aaKnown RBP22.46■■□□□ 1.19
CD44-222ENST00000526025 EPB41P11171 864 aaKnown RBP22.46■■□□□ 1.19
CD44-222ENST00000526025 POU3F3P20264 500 aaPredicted RBP22.46■■□□□ 1.19
CD44-222ENST00000526025 PBX3P40426 434 aa22.46■■□□□ 1.19
CD44-222ENST00000526025 CLCNKBP51801 687 aa22.46■■□□□ 1.19
CD44-222ENST00000526025 SPAG1Q07617 926 aa22.46■■□□□ 1.19
CD44-222ENST00000526025 GRIN2CQ14957 1233 aa22.46■■□□□ 1.19
CD44-222ENST00000526025 FILIP1Q7Z7B0 1213 aa22.46■■□□□ 1.19
CD44-222ENST00000526025 DDX53Q86TM3 631 aaKnown RBP22.46■■□□□ 1.19
CD44-222ENST00000526025 SPPL3Q8TCT6 385 aa22.46■■□□□ 1.19
CD44-222ENST00000526025 BORCS6Q96GS4 357 aa22.46■■□□□ 1.19
CD44-222ENST00000526025 GZF1Q9H116 711 aaPredicted RBP22.46■■□□□ 1.19
CD44-222ENST00000526025 CERS4Q9HA82 394 aa22.46■■□□□ 1.19
CD44-222ENST00000526025 PUF60Q9UHX1 559 aaKnown RBP22.46■■□□□ 1.19
CD44-222ENST00000526025 ADAM28Q9UKQ2 775 aa22.46■■□□□ 1.19
CD44-222ENST00000526025 PRG3Q9Y2Y8 225 aaPredicted RBP22.46■■□□□ 1.19
CD44-222ENST00000526025 SCN1AP35498 2009 aa22.46■■□□□ 1.19
CD44-222ENST00000526025 ANO9A1A5B4 782 aa22.45■■□□□ 1.18
CD44-222ENST00000526025 PODXLO00592 558 aa22.45■■□□□ 1.18
CD44-222ENST00000526025 IKBKBO14920 756 aa22.45■■□□□ 1.18
CD44-222ENST00000526025 LPXNO60711 386 aa22.45■■□□□ 1.18
CD44-222ENST00000526025 ELAVL2Q12926 359 aaKnown RBP22.45■■□□□ 1.18
CD44-222ENST00000526025 DUOXA2Q1HG44 320 aa22.45■■□□□ 1.18
CD44-222ENST00000526025 TMEM173Q86WV6 379 aaPredicted RBP22.45■■□□□ 1.18
CD44-222ENST00000526025 RNF168Q8IYW5 571 aaPredicted RBP22.45■■□□□ 1.18
CD44-222ENST00000526025 CSGALNACT2Q8N6G5 542 aa22.45■■□□□ 1.18
CD44-222ENST00000526025 ANKRD36BP1Q96IX9 119 aa22.45■■□□□ 1.18
CD44-222ENST00000526025 PAAF1Q9BRP4 392 aa22.45■■□□□ 1.18
CD44-222ENST00000526025 GOLGA2P5Q9HBQ8 144 aa22.45■■□□□ 1.18
CD44-222ENST00000526025 ITGA11Q9UKX5 1188 aa22.45■■□□□ 1.18
CD44-222ENST00000526025 SZT2Q5T011 3432 aa22.44■■□□□ 1.18
CD44-222ENST00000526025 NT5C1B-RDH14C9J2C7 533 aa22.44■■□□□ 1.18
CD44-222ENST00000526025 SF3B1O75533 1304 aaKnown RBP eCLIP22.44■■□□□ 1.188e-6■■■■■ 107
CD44-222ENST00000526025 KIF4AO95239 1232 aa22.44■■□□□ 1.18
CD44-222ENST00000526025 GNA14O95837 355 aa22.44■■□□□ 1.18
CD44-222ENST00000526025 TMEM191BP0C7N4 346 aa22.44■■□□□ 1.18
CD44-222ENST00000526025 KRT13P13646 458 aa22.44■■□□□ 1.18
CD44-222ENST00000526025 STX17P56962 302 aa22.44■■□□□ 1.18
CD44-222ENST00000526025 TFAMQ00059 246 aaKnown RBP22.44■■□□□ 1.18
CD44-222ENST00000526025 BFSP1Q12934 665 aa22.44■■□□□ 1.18
CD44-222ENST00000526025 PTPROQ16827 1216 aa22.44■■□□□ 1.18
CD44-222ENST00000526025 C9orf57Q5W0N0 161 aa22.44■■□□□ 1.18
CD44-222ENST00000526025 PDE12Q6L8Q7 609 aaKnown RBP22.44■■□□□ 1.18
CD44-222ENST00000526025 GPR65Q8IYL9 337 aa22.44■■□□□ 1.18
CD44-222ENST00000526025 DEFB123Q8N688 67 aa22.44■■□□□ 1.18
CD44-222ENST00000526025 PLEKHO2Q8TD55 490 aa22.44■■□□□ 1.18
CD44-222ENST00000526025 BCL7CQ8WUZ0 217 aaPredicted RBP22.44■■□□□ 1.18
CD44-222ENST00000526025 CCDC127Q96BQ5 260 aa22.44■■□□□ 1.18
CD44-222ENST00000526025 MED15Q96RN5 788 aa22.44■■□□□ 1.18
CD44-222ENST00000526025 METTL14Q9HCE5 456 aaKnown RBP22.44■■□□□ 1.18
CD44-222ENST00000526025 DPP3Q9NY33 737 aa22.44■■□□□ 1.18
CD44-222ENST00000526025 VWA8A3KMH1 1905 aa22.43■■□□□ 1.18
CD44-222ENST00000526025 CDH23Q9H251 3354 aa22.43■■□□□ 1.18
CD44-222ENST00000526025 PTPRJQ12913 1337 aa22.43■■□□□ 1.18
CD44-222ENST00000526025 PIRO00625 290 aa22.43■■□□□ 1.18
CD44-222ENST00000526025 GRM6O15303 877 aa22.43■■□□□ 1.18
CD44-222ENST00000526025 B3GAT3O94766 335 aa22.43■■□□□ 1.18
CD44-222ENST00000526025 TNNC2P02585 160 aa22.43■■□□□ 1.18
CD44-222ENST00000526025 DLATP10515 647 aaKnown RBP22.43■■□□□ 1.18
CD44-222ENST00000526025 TNNI1P19237 187 aa22.43■■□□□ 1.18
CD44-222ENST00000526025 VAMP7P51809 220 aa22.43■■□□□ 1.18
CD44-222ENST00000526025 MARSP56192 900 aaKnown RBP22.43■■□□□ 1.18
CD44-222ENST00000526025 TYRO3Q06418 890 aa22.43■■□□□ 1.18
CD44-222ENST00000526025 FRMD5Q7Z6J6 570 aa22.43■■□□□ 1.18
CD44-222ENST00000526025 GDPD5Q8WTR4 605 aa22.43■■□□□ 1.18
CD44-222ENST00000526025 MTMR12Q9C0I1 747 aa22.43■■□□□ 1.18
CD44-222ENST00000526025 PRDM12Q9H4Q4 367 aa22.43■■□□□ 1.18
CD44-222ENST00000526025 LRRIQ3A6PVS8 624 aaPredicted RBP22.42■■□□□ 1.18
CD44-222ENST00000526025 TRAPPC3O43617 180 aa22.42■■□□□ 1.18
CD44-222ENST00000526025 TADA2AO75478 443 aa22.42■■□□□ 1.18
CD44-222ENST00000526025 CCDC192P0DO97 292 aa22.42■■□□□ 1.18
CD44-222ENST00000526025 GTF2H1P32780 548 aa22.42■■□□□ 1.18
CD44-222ENST00000526025 AARSP49588 968 aaKnown RBP eCLIP22.42■■□□□ 1.18
CD44-222ENST00000526025 FUT10Q6P4F1 479 aa22.42■■□□□ 1.18
CD44-222ENST00000526025 CD300LGQ6UXG3 332 aa22.42■■□□□ 1.18
CD44-222ENST00000526025 C1orf127Q8N9H9 656 aa22.42■■□□□ 1.18
CD44-222ENST00000526025 CXorf38Q8TB03 319 aa22.42■■□□□ 1.18
CD44-222ENST00000526025 POF1BQ8WVV4 589 aa22.42■■□□□ 1.18
CD44-222ENST00000526025 MRPL38Q96DV4 380 aaKnown RBP22.42■■□□□ 1.18
CD44-222ENST00000526025 HERC2P3Q9BVR0 1158 aa22.42■■□□□ 1.18
CD44-222ENST00000526025 ALG13Q9NP73 1137 aaKnown RBP22.42■■□□□ 1.18
CD44-222ENST00000526025 MTMR10Q9NXD2 777 aa22.42■■□□□ 1.18
CD44-222ENST00000526025 CACNG4Q9UBN1 327 aa22.42■■□□□ 1.18
CD44-222ENST00000526025 STX10O60499 249 aa22.41■■□□□ 1.18
CD44-222ENST00000526025 SOD2P04179 222 aa22.41■■□□□ 1.18
CD44-222ENST00000526025 PNPLA4P41247 253 aa22.41■■□□□ 1.18
CD44-222ENST00000526025 GUCY2FP51841 1108 aa22.41■■□□□ 1.18
CD44-222ENST00000526025 BMS1Q14692 1282 aaKnown RBP22.41■■□□□ 1.18
CD44-222ENST00000526025 Q7L0L9 218 aa22.41■■□□□ 1.18
CD44-222ENST00000526025 LRRC52Q8N7C0 313 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms