RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 TBX20Q9UMR3 447 aa13.17□□□□□ -0.3
SSBP3-210ENST00000525990 POLIQ9UNA4 740 aa13.17□□□□□ -0.3
SSBP3-210ENST00000525990 MTMR6Q9Y217 621 aa13.17□□□□□ -0.3
SSBP3-210ENST00000525990 MIA3Q5JRA6 1907 aa13.16□□□□□ -0.3
SSBP3-210ENST00000525990 A0A087X0B3 334 aa13.16□□□□□ -0.3
SSBP3-210ENST00000525990 WDR27A2RRH5 827 aa13.16□□□□□ -0.3
SSBP3-210ENST00000525990 ANKRD63C9JTQ0 380 aa13.16□□□□□ -0.3
SSBP3-210ENST00000525990 CLDN3O15551 220 aa13.16□□□□□ -0.3
SSBP3-210ENST00000525990 ARPP19P56211 112 aa13.16□□□□□ -0.3
SSBP3-210ENST00000525990 ROR1Q01973 937 aa13.16□□□□□ -0.3
SSBP3-210ENST00000525990 TDGQ13569 410 aa13.16□□□□□ -0.3
SSBP3-210ENST00000525990 RAB33AQ14088 237 aa13.16□□□□□ -0.3
SSBP3-210ENST00000525990 PPM1LQ5SGD2 360 aa13.16□□□□□ -0.3
SSBP3-210ENST00000525990 VARS2Q5ST30 1063 aaKnown RBP13.16□□□□□ -0.3
SSBP3-210ENST00000525990 CWF19L1Q69YN2 538 aaKnown RBP13.16□□□□□ -0.3
SSBP3-210ENST00000525990 ELMSAN1Q6PJG2 1045 aa13.16□□□□□ -0.3
SSBP3-210ENST00000525990 POTEHQ6S545 545 aa13.16□□□□□ -0.3
SSBP3-210ENST00000525990 DYMQ7RTS9 669 aa13.16□□□□□ -0.3
SSBP3-210ENST00000525990 KCTD17Q8N5Z5 321 aa13.16□□□□□ -0.3
SSBP3-210ENST00000525990 USP28Q96RU2 1077 aa13.16□□□□□ -0.3
SSBP3-210ENST00000525990 RPP25Q9BUL9 199 aaKnown RBP13.16□□□□□ -0.3
SSBP3-210ENST00000525990 CCSER1Q9C0I3 900 aa13.16□□□□□ -0.3
SSBP3-210ENST00000525990 EPS15L1Q9UBC2 864 aa13.16□□□□□ -0.3
SSBP3-210ENST00000525990 DPP7Q9UHL4 492 aa13.16□□□□□ -0.3
SSBP3-210ENST00000525990 DUSP12Q9UNI6 340 aa13.16□□□□□ -0.3
SSBP3-210ENST00000525990 TTC26A0AVF1 554 aa13.15□□□□□ -0.3
SSBP3-210ENST00000525990 LACTBL1A8MY62 500 aa13.15□□□□□ -0.3
SSBP3-210ENST00000525990 NRG2O14511 850 aaPredicted RBP13.15□□□□□ -0.3
SSBP3-210ENST00000525990 PPEF2O14830 753 aa13.15□□□□□ -0.3
SSBP3-210ENST00000525990 HNRNPDLO14979 420 aaKnown RBP13.15□□□□□ -0.3
SSBP3-210ENST00000525990 TRAK2O60296 914 aa13.15□□□□□ -0.3
SSBP3-210ENST00000525990 BMP15O95972 392 aa13.15□□□□□ -0.3
SSBP3-210ENST00000525990 C1RP00736 705 aa13.15□□□□□ -0.3
SSBP3-210ENST00000525990 KRT18P05783 430 aaKnown RBP13.15□□□□□ -0.3
SSBP3-210ENST00000525990 CFHP08603 1231 aa13.15□□□□□ -0.3
SSBP3-210ENST00000525990 LAMP2P13473 410 aa13.15□□□□□ -0.3
SSBP3-210ENST00000525990 NPR3P17342 541 aa13.15□□□□□ -0.3
SSBP3-210ENST00000525990 LIG4P49917 911 aa13.15□□□□□ -0.3
SSBP3-210ENST00000525990 MRE11P49959 708 aa13.15□□□□□ -0.3
SSBP3-210ENST00000525990 ENOX2Q16206 610 aaKnown RBP13.15□□□□□ -0.3
SSBP3-210ENST00000525990 LIN9Q5TKA1 542 aa13.15□□□□□ -0.3
SSBP3-210ENST00000525990 CYP26C1Q6V0L0 522 aa13.15□□□□□ -0.3
SSBP3-210ENST00000525990 SFR1Q86XK3 245 aa13.15□□□□□ -0.3
SSBP3-210ENST00000525990 ITFG1Q8TB96 612 aa13.15□□□□□ -0.3
SSBP3-210ENST00000525990 ING5Q8WYH8 240 aa13.15□□□□□ -0.3
SSBP3-210ENST00000525990 STAMQ92783 540 aa13.15□□□□□ -0.3
SSBP3-210ENST00000525990 KCNH6Q9H252 994 aa13.15□□□□□ -0.3
SSBP3-210ENST00000525990 PARVGQ9HBI0 331 aa13.15□□□□□ -0.3
SSBP3-210ENST00000525990 SLC38A7Q9NVC3 462 aa13.15□□□□□ -0.3
SSBP3-210ENST00000525990 KRBA1A5PL33 1030 aa13.14□□□□□ -0.31
SSBP3-210ENST00000525990 MYMKA6NI61 221 aa13.14□□□□□ -0.31
SSBP3-210ENST00000525990 K7ELQ4 463 aaPredicted RBP13.14□□□□□ -0.31
SSBP3-210ENST00000525990 SLC26A4O43511 780 aa13.14□□□□□ -0.31
SSBP3-210ENST00000525990 TRAPPC3O43617 180 aa13.14□□□□□ -0.31
SSBP3-210ENST00000525990 PI15O43692 258 aa13.14□□□□□ -0.31
SSBP3-210ENST00000525990 TBC1D4O60343 1298 aa13.14□□□□□ -0.31
SSBP3-210ENST00000525990 SEC24AO95486 1093 aa13.14□□□□□ -0.31
SSBP3-210ENST00000525990 PDCP20941 246 aa13.14□□□□□ -0.31
SSBP3-210ENST00000525990 FSHRP23945 695 aa13.14□□□□□ -0.31
SSBP3-210ENST00000525990 MCM4P33991 863 aa13.14□□□□□ -0.31
SSBP3-210ENST00000525990 HTR4Q13639 388 aa13.14□□□□□ -0.31
SSBP3-210ENST00000525990 SLC5A9Q2M3M2 681 aa13.14□□□□□ -0.31
SSBP3-210ENST00000525990 FOXD4L5Q5VV16 416 aaPredicted RBP13.14□□□□□ -0.31
SSBP3-210ENST00000525990 PDXDC1Q6P996 788 aa13.14□□□□□ -0.31
SSBP3-210ENST00000525990 PARM1Q6UWI2 310 aa13.14□□□□□ -0.31
SSBP3-210ENST00000525990 ANKS3Q6ZW76 656 aa13.14□□□□□ -0.31
SSBP3-210ENST00000525990 SIX5Q8N196 739 aa13.14□□□□□ -0.31
SSBP3-210ENST00000525990 SLC44A3Q8N4M1 653 aa13.14□□□□□ -0.31
SSBP3-210ENST00000525990 FLCNQ8NFG4 579 aa13.14□□□□□ -0.31
SSBP3-210ENST00000525990 FOXD4L4Q8WXT5 416 aaPredicted RBP13.14□□□□□ -0.31
SSBP3-210ENST00000525990 FGF14Q92915 247 aa13.14□□□□□ -0.31
SSBP3-210ENST00000525990 KIF12Q96FN5 646 aa13.14□□□□□ -0.31
SSBP3-210ENST00000525990 SUSD3Q96L08 255 aa13.14□□□□□ -0.31
SSBP3-210ENST00000525990 PANK2Q9BZ23 570 aa13.14□□□□□ -0.31
SSBP3-210ENST00000525990 IGSF9Q9P2J2 1179 aa13.14□□□□□ -0.31
SSBP3-210ENST00000525990 DNMT3BQ9UBC3 853 aaKnown RBP13.14□□□□□ -0.31
SSBP3-210ENST00000525990 CA14Q9ULX7 337 aa13.14□□□□□ -0.31
SSBP3-210ENST00000525990 NUB1Q9Y5A7 615 aa13.14□□□□□ -0.31
SSBP3-210ENST00000525990 TIMM13Q9Y5L4 95 aaPredicted RBP13.14□□□□□ -0.31
SSBP3-210ENST00000525990 SRPRBQ9Y5M8 271 aaKnown RBP13.14□□□□□ -0.31
SSBP3-210ENST00000525990 BACE2Q9Y5Z0 518 aa13.14□□□□□ -0.31
SSBP3-210ENST00000525990 NUMBLQ9Y6R0 609 aa13.14□□□□□ -0.31
SSBP3-210ENST00000525990 COL4A2P08572 1712 aa13.13□□□□□ -0.31
SSBP3-210ENST00000525990 TICRRQ7Z2Z1 1910 aa13.13□□□□□ -0.31
SSBP3-210ENST00000525990 H0Y858 1186 aa13.13□□□□□ -0.31
SSBP3-210ENST00000525990 OGTO15294 1046 aa13.13□□□□□ -0.31
SSBP3-210ENST00000525990 TBCAO75347 108 aaKnown RBP13.13□□□□□ -0.31
SSBP3-210ENST00000525990 PIGRP01833 764 aa13.13□□□□□ -0.31
SSBP3-210ENST00000525990 NFICP08651 508 aa13.13□□□□□ -0.31
SSBP3-210ENST00000525990 CLTAP09496 248 aa13.13□□□□□ -0.31
SSBP3-210ENST00000525990 HNRNPA1P09651 372 aaKnown RBP eCLIP13.13□□□□□ -0.31
SSBP3-210ENST00000525990 RPL9P32969 192 aaKnown RBP13.13□□□□□ -0.31
SSBP3-210ENST00000525990 DDIT3P35638 169 aa13.13□□□□□ -0.31
SSBP3-210ENST00000525990 CDR1P51861 262 aa13.13□□□□□ -0.31
SSBP3-210ENST00000525990 GTF2BQ00403 316 aa13.13□□□□□ -0.31
SSBP3-210ENST00000525990 KCNA1Q09470 495 aa13.13□□□□□ -0.31
SSBP3-210ENST00000525990 MRPL58Q14197 206 aaKnown RBP13.13□□□□□ -0.31
SSBP3-210ENST00000525990 ZBTB6Q15916 424 aa13.13□□□□□ -0.31
SSBP3-210ENST00000525990 SLC8B1Q6J4K2 584 aa13.13□□□□□ -0.31
SSBP3-210ENST00000525990 MAP4K3Q8IVH8 894 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms