RNA–Protein interactions for RNA: ENST00000525428.5

CLNS1A-204, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLNS1A, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-204ENST00000525428 VIL1P09327 827 aaKnown RBP11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 XRCC5P13010 732 aaKnown RBP11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 ANPEPP15144 967 aa11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 PRDX5P30044 214 aa11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 ITGA8P53708 1063 aa11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 COG7P83436 770 aa11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 PPATQ06203 517 aa11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 CDC16Q13042 620 aa11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 SLC1A5Q15758 541 aa11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 CALCRLQ16602 461 aa11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 DOK7Q18PE1 504 aa11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 KBTBD12Q3ZCT8 623 aa11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 TTC7BQ86TV6 843 aa11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 RASSF3Q86WH2 238 aa11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 UBL4BQ8N7F7 174 aa11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 HSPBAP1Q96EW2 488 aa11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 TLE6Q9H808 572 aa11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 EMILIN3Q9NT22 766 aa11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 NINJ2Q9NZG7 142 aa11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 ATMINO43313 823 aaPredicted RBP11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 RAD21O60216 631 aa11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 MARCH6O60337 910 aa11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 PABPC4Q13310 644 aaKnown RBP eCLIP11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 ARHGAP44Q17R89 818 aa11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 SLC35G1Q2M3R5 365 aa11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 SLC44A4Q53GD3 710 aa11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 KRT79Q5XKE5 535 aa11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 TRIM67Q6ZTA4 783 aa11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 PNMA1Q8ND90 353 aa11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 SCFD1Q8WVM8 642 aa11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 PRPF31Q8WWY3 499 aaKnown RBP11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 CEP63Q96MT8 703 aa11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 MXD3Q9BW11 206 aa11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 NDE1Q9NXR1 346 aa11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 PCDHB13Q9Y5F0 798 aa11.94□□□□□ -0.5
CLNS1A-204ENST00000525428 SYNGAP1Q96PV0 1343 aa11.93□□□□□ -0.5
CLNS1A-204ENST00000525428 SMCO2A6NFE2 343 aa11.93□□□□□ -0.5
CLNS1A-204ENST00000525428 TP73O15350 636 aa11.93□□□□□ -0.5
CLNS1A-204ENST00000525428 SLC37A4O43826 429 aa11.93□□□□□ -0.5
CLNS1A-204ENST00000525428 ZNF862O60290 1169 aa11.93□□□□□ -0.5
CLNS1A-204ENST00000525428 LRRN2O75325 713 aa11.93□□□□□ -0.5
CLNS1A-204ENST00000525428 TDP2O95551 362 aa11.93□□□□□ -0.5
CLNS1A-204ENST00000525428 ZNF24P17028 368 aa11.93□□□□□ -0.5
CLNS1A-204ENST00000525428 ADCY8P40145 1251 aa11.93□□□□□ -0.5
CLNS1A-204ENST00000525428 NPEPPSP55786 919 aa11.93□□□□□ -0.5
CLNS1A-204ENST00000525428 BTKQ06187 659 aa11.93□□□□□ -0.5
CLNS1A-204ENST00000525428 SLC45A4Q5BKX6 768 aa11.93□□□□□ -0.5
CLNS1A-204ENST00000525428 SH3D19Q5HYK7 790 aa11.93□□□□□ -0.5
CLNS1A-204ENST00000525428 DAB2IPQ5VWQ8 1189 aa11.93□□□□□ -0.5
CLNS1A-204ENST00000525428 FYB2Q5VWT5 728 aa11.93□□□□□ -0.5
CLNS1A-204ENST00000525428 ZNF746Q6NUN9 644 aaPredicted RBP11.93□□□□□ -0.5
CLNS1A-204ENST00000525428 RBM44Q6ZP01 1051 aaKnown RBP11.93□□□□□ -0.5
CLNS1A-204ENST00000525428 RAPH1Q70E73 1250 aa11.93□□□□□ -0.5
CLNS1A-204ENST00000525428 FBXO27Q8NI29 283 aa11.93□□□□□ -0.5
CLNS1A-204ENST00000525428 ZNF653Q96CK0 615 aa11.93□□□□□ -0.5
CLNS1A-204ENST00000525428 TUBGCP4Q9UGJ1 667 aa11.93□□□□□ -0.5
CLNS1A-204ENST00000525428 ANGPTL2Q9UKU9 493 aa11.93□□□□□ -0.5
CLNS1A-204ENST00000525428 MTUS1Q9ULD2 1270 aa11.93□□□□□ -0.5
CLNS1A-204ENST00000525428 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.93□□□□□ -0.5
CLNS1A-204ENST00000525428 E9PMD0 336 aa11.93□□□□□ -0.5
CLNS1A-204ENST00000525428 PPEF1O14829 653 aaPredicted RBP11.93□□□□□ -0.5
CLNS1A-204ENST00000525428 CLDN3O15551 220 aa11.93□□□□□ -0.5
CLNS1A-204ENST00000525428 PABPC4LP0CB38 370 aaKnown RBP11.93□□□□□ -0.5
CLNS1A-204ENST00000525428 COMTP21964 271 aa11.93□□□□□ -0.5
CLNS1A-204ENST00000525428 CASP5P51878 434 aa11.93□□□□□ -0.5
CLNS1A-204ENST00000525428 ZNF554Q86TJ5 538 aa11.93□□□□□ -0.5
CLNS1A-204ENST00000525428 NSL1Q96IY1 281 aa11.93□□□□□ -0.5
CLNS1A-204ENST00000525428 CATSPER2Q96P56 530 aa11.93□□□□□ -0.5
CLNS1A-204ENST00000525428 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.93□□□□□ -0.54e-8■■■■□ 23.5
CLNS1A-204ENST00000525428 KCNQ5Q9NR82 932 aa11.93□□□□□ -0.5
CLNS1A-204ENST00000525428 ZNF180Q9UJW8 692 aa11.93□□□□□ -0.5
CLNS1A-204ENST00000525428 PPM1HQ9ULR3 514 aa11.93□□□□□ -0.5
CLNS1A-204ENST00000525428 BARX2Q9UMQ3 279 aaPredicted RBP11.93□□□□□ -0.5
CLNS1A-204ENST00000525428 DIS3Q9Y2L1 958 aaKnown RBP11.93□□□□□ -0.5
CLNS1A-204ENST00000525428 TMEM221A6NGB7 291 aa11.92□□□□□ -0.5
CLNS1A-204ENST00000525428 H3BRJ5 948 aa11.92□□□□□ -0.5
CLNS1A-204ENST00000525428 CLIC2O15247 247 aa11.92□□□□□ -0.5
CLNS1A-204ENST00000525428 CTNNA2P26232 953 aa11.92□□□□□ -0.5
CLNS1A-204ENST00000525428 PRKCIP41743 596 aa11.92□□□□□ -0.5
CLNS1A-204ENST00000525428 CASP4P49662 377 aa11.92□□□□□ -0.5
CLNS1A-204ENST00000525428 PKN2Q16513 984 aaKnown RBP11.92□□□□□ -0.5
CLNS1A-204ENST00000525428 RNF207Q6ZRF8 634 aa11.92□□□□□ -0.5
CLNS1A-204ENST00000525428 FBXO33Q7Z6M2 555 aa11.92□□□□□ -0.5
CLNS1A-204ENST00000525428 ZNF384Q8TF68 577 aa11.92□□□□□ -0.5
CLNS1A-204ENST00000525428 C7orf43Q8WVR3 580 aa11.92□□□□□ -0.5
CLNS1A-204ENST00000525428 DNAJC19Q96DA6 116 aa11.92□□□□□ -0.5
CLNS1A-204ENST00000525428 SLX1AQ9BQ83 275 aa11.92□□□□□ -0.5
CLNS1A-204ENST00000525428 ANKRD2Q9GZV1 360 aa11.92□□□□□ -0.5
CLNS1A-204ENST00000525428 TRABDQ9H4I3 376 aa11.92□□□□□ -0.5
CLNS1A-204ENST00000525428 PFDN4Q9NQP4 134 aa11.92□□□□□ -0.5
CLNS1A-204ENST00000525428 BMP2KQ9NSY1 1161 aaPredicted RBP11.92□□□□□ -0.5
CLNS1A-204ENST00000525428 STK17AQ9UEE5 414 aa11.92□□□□□ -0.5
CLNS1A-204ENST00000525428 STX8Q9UNK0 236 aa11.92□□□□□ -0.5
CLNS1A-204ENST00000525428 SH3GLB1Q9Y371 365 aa11.92□□□□□ -0.5
CLNS1A-204ENST00000525428 ADGRA3Q8IWK6 1321 aa11.92□□□□□ -0.5
CLNS1A-204ENST00000525428 EXOC1LA0A1B0GW35 172 aa11.92□□□□□ -0.5
CLNS1A-204ENST00000525428 TRIM43BA6NCK2 446 aa11.92□□□□□ -0.5
CLNS1A-204ENST00000525428 TMEM253P0C7T8 217 aa11.92□□□□□ -0.5
CLNS1A-204ENST00000525428 ATP6V1B1P15313 513 aa11.92□□□□□ -0.5
CLNS1A-204ENST00000525428 TNFAIP3P21580 790 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms