RNA–Protein interactions for RNA: ENST00000524481.5

PTPRK-216, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 3,157 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-216ENST00000524481 CTSHP09668 335 aa12.58□□□□□ -0.4
PTPRK-216ENST00000524481 TNNC1P63316 161 aa12.58□□□□□ -0.4
PTPRK-216ENST00000524481 CUL2Q13617 745 aa12.58□□□□□ -0.4
PTPRK-216ENST00000524481 TARBP2Q15633 366 aaKnown RBP12.58□□□□□ -0.4
PTPRK-216ENST00000524481 TAPT1Q6NXT6 567 aa12.58□□□□□ -0.4
PTPRK-216ENST00000524481 DCUN1D2Q6PH85 259 aa12.58□□□□□ -0.4
PTPRK-216ENST00000524481 NT5DC3Q86UY8 548 aa12.58□□□□□ -0.4
PTPRK-216ENST00000524481 CCDC25Q86WR0 208 aa12.58□□□□□ -0.4
PTPRK-216ENST00000524481 C7orf31Q8N865 590 aa12.58□□□□□ -0.4
PTPRK-216ENST00000524481 TMC2Q8TDI7 906 aa12.58□□□□□ -0.4
PTPRK-216ENST00000524481 SHC3Q92529 594 aa12.58□□□□□ -0.4
PTPRK-216ENST00000524481 ALG3Q92685 438 aa12.58□□□□□ -0.4
PTPRK-216ENST00000524481 MAML3Q96JK9 1138 aa12.58□□□□□ -0.4
PTPRK-216ENST00000524481 RNPC3Q96LT9 517 aaKnown RBP12.58□□□□□ -0.4
PTPRK-216ENST00000524481 ZIC5Q96T25 663 aa12.58□□□□□ -0.4
PTPRK-216ENST00000524481 TRIM51Q9BSJ1 452 aa12.58□□□□□ -0.4
PTPRK-216ENST00000524481 KIAA1586Q9HCI6 787 aa12.58□□□□□ -0.4
PTPRK-216ENST00000524481 STIM2Q9P246 746 aa12.58□□□□□ -0.4
PTPRK-216ENST00000524481 PI4K2BG5E9Z4 385 aa12.57□□□□□ -0.4
PTPRK-216ENST00000524481 IGF2BP3O00425 579 aaKnown RBP eCLIP12.57□□□□□ -0.4
PTPRK-216ENST00000524481 C4BPAP04003 597 aaKnown RBP12.57□□□□□ -0.4
PTPRK-216ENST00000524481 TMEM253P0C7T8 217 aa12.57□□□□□ -0.4
PTPRK-216ENST00000524481 AKAP5P24588 427 aa12.57□□□□□ -0.4
PTPRK-216ENST00000524481 NFIL3Q16649 462 aa12.57□□□□□ -0.4
PTPRK-216ENST00000524481 MAATS1Q7Z4T9 603 aa12.57□□□□□ -0.4
PTPRK-216ENST00000524481 C12orf56Q8IXR9 622 aa12.57□□□□□ -0.4
PTPRK-216ENST00000524481 DNAJB3Q8WWF6 145 aa12.57□□□□□ -0.4
PTPRK-216ENST00000524481 DNAJC17Q9NVM6 304 aaKnown RBP12.57□□□□□ -0.4
PTPRK-216ENST00000524481 KCNG1Q9UIX4 513 aa12.57□□□□□ -0.4
PTPRK-216ENST00000524481 TSKSQ9UJT2 592 aa12.57□□□□□ -0.4
PTPRK-216ENST00000524481 DOCK3Q8IZD9 2030 aa12.57□□□□□ -0.4
PTPRK-216ENST00000524481 ZRANB2O95218 330 aaKnown RBP eCLIP12.57□□□□□ -0.4
PTPRK-216ENST00000524481 NFICP08651 508 aa12.57□□□□□ -0.4
PTPRK-216ENST00000524481 FAM153BP0C7A2 387 aa12.57□□□□□ -0.4
PTPRK-216ENST00000524481 STAG3L1P0CL83 205 aa12.57□□□□□ -0.4
PTPRK-216ENST00000524481 PHKA2P46019 1235 aa12.57□□□□□ -0.4
PTPRK-216ENST00000524481 LMAN1P49257 510 aa12.57□□□□□ -0.4
PTPRK-216ENST00000524481 CDR2Q01850 454 aa12.57□□□□□ -0.4
PTPRK-216ENST00000524481 KIF22Q14807 665 aa12.57□□□□□ -0.4
PTPRK-216ENST00000524481 PSMD6Q15008 389 aa12.57□□□□□ -0.4
PTPRK-216ENST00000524481 FAM153CQ494X1 144 aa12.57□□□□□ -0.4
PTPRK-216ENST00000524481 CCNI2Q6ZMN8 369 aaPredicted RBP12.57□□□□□ -0.4
PTPRK-216ENST00000524481 ANKRD36BP1Q96IX9 119 aa12.57□□□□□ -0.4
PTPRK-216ENST00000524481 CDHR5Q9HBB8 845 aa12.57□□□□□ -0.4
PTPRK-216ENST00000524481 PARP2Q9UGN5 583 aa12.57□□□□□ -0.4
PTPRK-216ENST00000524481 FAM153AQ9UHL3 310 aa12.57□□□□□ -0.4
PTPRK-216ENST00000524481 L1RE1Q9UN81 338 aa12.57□□□□□ -0.4
PTPRK-216ENST00000524481 AGAP1Q9UPQ3 857 aa12.57□□□□□ -0.4
PTPRK-216ENST00000524481 FAN1Q9Y2M0 1017 aa12.57□□□□□ -0.4
PTPRK-216ENST00000524481 KIF13BQ9NQT8 1826 aa12.57□□□□□ -0.4
PTPRK-216ENST00000524481 ZBTB42B2RXF5 422 aa12.57□□□□□ -0.4
PTPRK-216ENST00000524481 ADCY6O43306 1168 aa12.57□□□□□ -0.4
PTPRK-216ENST00000524481 GRIK4Q16099 956 aa12.57□□□□□ -0.4
PTPRK-216ENST00000524481 USP38Q8NB14 1042 aa12.57□□□□□ -0.4
PTPRK-216ENST00000524481 MAGOHBQ96A72 148 aaKnown RBP12.57□□□□□ -0.4
PTPRK-216ENST00000524481 RNF25Q96BH1 459 aaPredicted RBP12.57□□□□□ -0.4
PTPRK-216ENST00000524481 HAUS1Q96CS2 278 aa12.57□□□□□ -0.4
PTPRK-216ENST00000524481 HVCN1Q96D96 273 aa12.57□□□□□ -0.4
PTPRK-216ENST00000524481 FBXL5Q9UKA1 691 aa12.57□□□□□ -0.4
PTPRK-216ENST00000524481 IGKV6D-21A0A0A0MT36 114 aa12.56□□□□□ -0.4
PTPRK-216ENST00000524481 LACTBL1A8MY62 500 aa12.56□□□□□ -0.4
PTPRK-216ENST00000524481 H3BQF6 201 aa12.56□□□□□ -0.4
PTPRK-216ENST00000524481 P4HA2O15460 535 aa12.56□□□□□ -0.4
PTPRK-216ENST00000524481 DAPK3O43293 454 aa12.56□□□□□ -0.4
PTPRK-216ENST00000524481 BRCA1P38398 1863 aaKnown RBP12.56□□□□□ -0.4
PTPRK-216ENST00000524481 CCDC105Q8IYK2 499 aa12.56□□□□□ -0.4
PTPRK-216ENST00000524481 UBL4BQ8N7F7 174 aa12.56□□□□□ -0.4
PTPRK-216ENST00000524481 C1orf54Q8WWF1 131 aa12.56□□□□□ -0.4
PTPRK-216ENST00000524481 RPGRIP1Q96KN7 1286 aa12.56□□□□□ -0.4
PTPRK-216ENST00000524481 CDT1Q9H211 546 aa12.56□□□□□ -0.4
PTPRK-216ENST00000524481 GRAP2O75791 330 aa12.56□□□□□ -0.4
PTPRK-216ENST00000524481 PGK1P00558 417 aa12.56□□□□□ -0.4
PTPRK-216ENST00000524481 ATF7P17544 494 aaPredicted RBP12.56□□□□□ -0.4
PTPRK-216ENST00000524481 ARF4P18085 180 aaPredicted RBP12.56□□□□□ -0.4
PTPRK-216ENST00000524481 GCLCP48506 637 aaPredicted RBP12.56□□□□□ -0.4
PTPRK-216ENST00000524481 PLCB3Q01970 1234 aa12.56□□□□□ -0.4
PTPRK-216ENST00000524481 DGKDQ16760 1214 aa12.56□□□□□ -0.4
PTPRK-216ENST00000524481 ZNF662Q6ZS27 426 aa12.56□□□□□ -0.4
PTPRK-216ENST00000524481 IFT20Q8IY31 132 aa12.56□□□□□ -0.4
PTPRK-216ENST00000524481 MSANTD4Q8NCY6 345 aa12.56□□□□□ -0.4
PTPRK-216ENST00000524481 C1orf131Q8NDD1 294 aaKnown RBP12.56□□□□□ -0.4
PTPRK-216ENST00000524481 UBA3Q8TBC4 463 aa12.56□□□□□ -0.4
PTPRK-216ENST00000524481 ADPGKQ9BRR6 497 aa12.56□□□□□ -0.4
PTPRK-216ENST00000524481 CISHQ9NSE2 258 aa12.56□□□□□ -0.4
PTPRK-216ENST00000524481 SNX24Q9Y343 169 aa12.56□□□□□ -0.4
PTPRK-216ENST00000524481 PCDHB2Q9Y5E7 798 aa12.56□□□□□ -0.4
PTPRK-216ENST00000524481 ACKR2O00590 384 aa12.55□□□□□ -0.4
PTPRK-216ENST00000524481 STRNO43815 780 aa12.55□□□□□ -0.4
PTPRK-216ENST00000524481 PPFIA4O75335 1185 aa12.55□□□□□ -0.4
PTPRK-216ENST00000524481 SF3A3Q12874 501 aaKnown RBP eCLIP12.55□□□□□ -0.41e-6■■■■□ 21.5
PTPRK-216ENST00000524481 ZNF792Q3KQV3 632 aa12.55□□□□□ -0.4
PTPRK-216ENST00000524481 ATP13A4Q4VNC1 1196 aa12.55□□□□□ -0.4
PTPRK-216ENST00000524481 JADE1Q6IE81 842 aa12.55□□□□□ -0.4
PTPRK-216ENST00000524481 MPZL3Q6UWV2 235 aa12.55□□□□□ -0.4
PTPRK-216ENST00000524481 PLPPR4Q7Z2D5 763 aa12.55□□□□□ -0.4
PTPRK-216ENST00000524481 EFCAB13Q8IY85 973 aa12.55□□□□□ -0.4
PTPRK-216ENST00000524481 LRRC57Q8N9N7 239 aa12.55□□□□□ -0.4
PTPRK-216ENST00000524481 UBLCP1Q8WVY7 318 aaPredicted RBP12.55□□□□□ -0.4
PTPRK-216ENST00000524481 KIF12Q96FN5 646 aa12.55□□□□□ -0.4
PTPRK-216ENST00000524481 CCDC114Q96M63 670 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms