RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 IFT74Q96LB3 600 aa7.67□□□□□ -1.18
VPS11-201ENST00000524454 FBXL18Q96ME1 805 aa7.67□□□□□ -1.18
VPS11-201ENST00000524454 OSMRQ99650 979 aa7.67□□□□□ -1.18
VPS11-201ENST00000524454 CELF4Q9BZC1 486 aaKnown RBP7.67□□□□□ -1.18
VPS11-201ENST00000524454 DHX33Q9H6R0 707 aaKnown RBP7.67□□□□□ -1.18
VPS11-201ENST00000524454 SUGCTQ9HAC7 445 aa7.67□□□□□ -1.18
VPS11-201ENST00000524454 NRBP2Q9NSY0 501 aa7.67□□□□□ -1.18
VPS11-201ENST00000524454 ARHGAP28Q9P2N2 729 aa7.67□□□□□ -1.18
VPS11-201ENST00000524454 DNAI1Q9UI46 699 aa7.67□□□□□ -1.18
VPS11-201ENST00000524454 AKT3Q9Y243 479 aa7.67□□□□□ -1.18
VPS11-201ENST00000524454 STXBP5LQ9Y2K9 1186 aa7.67□□□□□ -1.18
VPS11-201ENST00000524454 NOC2LQ9Y3T9 749 aaKnown RBP7.67□□□□□ -1.18
VPS11-201ENST00000524454 MYH11P35749 1972 aa7.66□□□□□ -1.18
VPS11-201ENST00000524454 ANO9A1A5B4 782 aa7.66□□□□□ -1.18
VPS11-201ENST00000524454 SOWAHDA6NJG2 315 aa7.66□□□□□ -1.18
VPS11-201ENST00000524454 USO1O60763 962 aaKnown RBP7.66□□□□□ -1.18
VPS11-201ENST00000524454 CSDE1O75534 798 aaKnown RBP7.66□□□□□ -1.18
VPS11-201ENST00000524454 PRPF6O94906 941 aaKnown RBP7.66□□□□□ -1.18
VPS11-201ENST00000524454 GJB5O95377 273 aa7.66□□□□□ -1.18
VPS11-201ENST00000524454 AMHP03971 560 aa7.66□□□□□ -1.18
VPS11-201ENST00000524454 SERPING1P05155 500 aa7.66□□□□□ -1.18
VPS11-201ENST00000524454 KRT13P13646 458 aa7.66□□□□□ -1.18
VPS11-201ENST00000524454 IGFBP4P22692 258 aa7.66□□□□□ -1.18
VPS11-201ENST00000524454 NMT1P30419 496 aaKnown RBP7.66□□□□□ -1.18
VPS11-201ENST00000524454 PRKCIP41743 596 aa7.66□□□□□ -1.18
VPS11-201ENST00000524454 NPTX2P47972 431 aa7.66□□□□□ -1.18
VPS11-201ENST00000524454 GATMP50440 423 aa7.66□□□□□ -1.18
VPS11-201ENST00000524454 EFNA5P52803 228 aa7.66□□□□□ -1.18
VPS11-201ENST00000524454 POU5F1BQ06416 359 aa7.66□□□□□ -1.18
VPS11-201ENST00000524454 BFSP1Q12934 665 aa7.66□□□□□ -1.18
VPS11-201ENST00000524454 NFX1Q12986 1120 aaKnown RBP7.66□□□□□ -1.18
VPS11-201ENST00000524454 PAK2Q13177 524 aa7.66□□□□□ -1.18
VPS11-201ENST00000524454 TARBP2Q15633 366 aaKnown RBP7.66□□□□□ -1.18
VPS11-201ENST00000524454 CCDC85BQ15834 202 aaPredicted RBP7.66□□□□□ -1.18
VPS11-201ENST00000524454 ARHGAP29Q52LW3 1261 aa7.66□□□□□ -1.18
VPS11-201ENST00000524454 IER5Q5VY09 327 aa7.66□□□□□ -1.18
VPS11-201ENST00000524454 PDXDC1Q6P996 788 aa7.66□□□□□ -1.18
VPS11-201ENST00000524454 BLOC1S3Q6QNY0 202 aa7.66□□□□□ -1.18
VPS11-201ENST00000524454 RTN4RL1Q86UN2 441 aaPredicted RBP7.66□□□□□ -1.18
VPS11-201ENST00000524454 USP38Q8NB14 1042 aa7.66□□□□□ -1.18
VPS11-201ENST00000524454 XXYLT1Q8NBI6 393 aa7.66□□□□□ -1.18
VPS11-201ENST00000524454 MAFAQ8NHW3 353 aaPredicted RBP7.66□□□□□ -1.18
VPS11-201ENST00000524454 PHOSPHO2Q8TCD6 241 aa7.66□□□□□ -1.18
VPS11-201ENST00000524454 GDPD5Q8WTR4 605 aa7.66□□□□□ -1.18
VPS11-201ENST00000524454 CEP170P1Q96L14 293 aa7.66□□□□□ -1.18
VPS11-201ENST00000524454 CCDC42Q96M95 316 aa7.66□□□□□ -1.18
VPS11-201ENST00000524454 PCMTD1Q96MG8 357 aaPredicted RBP7.66□□□□□ -1.18
VPS11-201ENST00000524454 GANQ9H2C0 597 aa7.66□□□□□ -1.18
VPS11-201ENST00000524454 MMRN2Q9H8L6 949 aa7.66□□□□□ -1.18
VPS11-201ENST00000524454 NHEJ1Q9H9Q4 299 aaPredicted RBP7.66□□□□□ -1.18
VPS11-201ENST00000524454 PADI3Q9ULW8 664 aa7.66□□□□□ -1.18
VPS11-201ENST00000524454 TBX20Q9UMR3 447 aa7.66□□□□□ -1.18
VPS11-201ENST00000524454 STYXL1Q9Y6J8 313 aa7.66□□□□□ -1.18
VPS11-201ENST00000524454 TMEM265A0A087WTH1 108 aa7.65□□□□□ -1.18
VPS11-201ENST00000524454 LINC01553A4QN01 128 aa7.65□□□□□ -1.18
VPS11-201ENST00000524454 BTNL10A8MVZ5 291 aa7.65□□□□□ -1.18
VPS11-201ENST00000524454 RNF225M0QZC1 329 aaPredicted RBP7.65□□□□□ -1.18
VPS11-201ENST00000524454 ENPP3O14638 875 aa7.65□□□□□ -1.18
VPS11-201ENST00000524454 PJA2O43164 708 aa7.65□□□□□ -1.18
VPS11-201ENST00000524454 MGEA5O60502 916 aa7.65□□□□□ -1.18
VPS11-201ENST00000524454 ZC3H11AO75152 810 aaKnown RBP eCLIP7.65□□□□□ -1.18
VPS11-201ENST00000524454 GPR32O75388 356 aa7.65□□□□□ -1.18
VPS11-201ENST00000524454 MAFO75444 373 aaPredicted RBP7.65□□□□□ -1.18
VPS11-201ENST00000524454 RPS6KA5O75582 802 aa7.65□□□□□ -1.18
VPS11-201ENST00000524454 NOL4O94818 638 aa7.65□□□□□ -1.18
VPS11-201ENST00000524454 CSPG5O95196 566 aa7.65□□□□□ -1.18
VPS11-201ENST00000524454 UCHL3P15374 230 aa7.65□□□□□ -1.18
VPS11-201ENST00000524454 FMO5P49326 533 aa7.65□□□□□ -1.18
VPS11-201ENST00000524454 VAV2P52735 878 aa7.65□□□□□ -1.18
VPS11-201ENST00000524454 NLRP11P59045 1033 aaKnown RBP7.65□□□□□ -1.18
VPS11-201ENST00000524454 COPS2P61201 443 aa7.65□□□□□ -1.18
VPS11-201ENST00000524454 POU5F1Q01860 360 aaKnown RBP7.65□□□□□ -1.18
VPS11-201ENST00000524454 KCNMA1Q12791 1236 aa7.65□□□□□ -1.18
VPS11-201ENST00000524454 MXD4Q14582 209 aaPredicted RBP7.65□□□□□ -1.18
VPS11-201ENST00000524454 EMC2Q15006 297 aa7.65□□□□□ -1.18
VPS11-201ENST00000524454 SPA17Q15506 151 aa7.65□□□□□ -1.18
VPS11-201ENST00000524454 RALGAPA2Q2PPJ7 1873 aa7.65□□□□□ -1.18
VPS11-201ENST00000524454 ASTE1Q2TB18 679 aaPredicted RBP7.65□□□□□ -1.18
VPS11-201ENST00000524454 PUS10Q3MIT2 529 aaKnown RBP7.65□□□□□ -1.18
VPS11-201ENST00000524454 FNDC1Q4ZHG4 1894 aaPredicted RBP7.65□□□□□ -1.18
VPS11-201ENST00000524454 KLHDC7AQ5VTJ3 777 aa7.65□□□□□ -1.18
VPS11-201ENST00000524454 SFMBT2Q5VUG0 894 aa7.65□□□□□ -1.18
VPS11-201ENST00000524454 SLFN12LQ6IEE8 588 aa7.65□□□□□ -1.18
VPS11-201ENST00000524454 VPS36Q86VN1 386 aa7.65□□□□□ -1.18
VPS11-201ENST00000524454 FAM228AQ86W67 206 aa7.65□□□□□ -1.18
VPS11-201ENST00000524454 CREBRFQ8IUR6 639 aa7.65□□□□□ -1.18
VPS11-201ENST00000524454 KSR1Q8IVT5 923 aa7.65□□□□□ -1.18
VPS11-201ENST00000524454 SYCP3Q8IZU3 236 aa7.65□□□□□ -1.18
VPS11-201ENST00000524454 RNF10Q8N5U6 811 aaKnown RBP7.65□□□□□ -1.18
VPS11-201ENST00000524454 LINC01465Q8N7H1 131 aa7.65□□□□□ -1.18
VPS11-201ENST00000524454 CPLX3Q8WVH0 158 aa7.65□□□□□ -1.18
VPS11-201ENST00000524454 TCP11Q8WWU5 503 aa7.65□□□□□ -1.18
VPS11-201ENST00000524454 ZNF516Q92618 1163 aa7.65□□□□□ -1.18
VPS11-201ENST00000524454 APBB2Q92870 758 aa7.65□□□□□ -1.18
VPS11-201ENST00000524454 HLA-CQ95604 372 aa7.65□□□□□ -1.18
VPS11-201ENST00000524454 SCLT1Q96NL6 688 aa7.65□□□□□ -1.18
VPS11-201ENST00000524454 CEP89Q96ST8 783 aa7.65□□□□□ -1.18
VPS11-201ENST00000524454 YME1L1Q96TA2 773 aa7.65□□□□□ -1.18
VPS11-201ENST00000524454 C17orf80Q9BSJ5 609 aa7.65□□□□□ -1.18
VPS11-201ENST00000524454 PRR14Q9BWN1 585 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms