RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 HTR3AP46098 478 aa7.22□□□□□ -1.25
SKP1-213ENST00000524288 BPIFB4P59827 614 aa7.22□□□□□ -1.25
SKP1-213ENST00000524288 NKX6-1P78426 367 aaPredicted RBP7.22□□□□□ -1.25
SKP1-213ENST00000524288 TLE1Q04724 770 aa7.22□□□□□ -1.25
SKP1-213ENST00000524288 FGL2Q14314 439 aa7.22□□□□□ -1.25
SKP1-213ENST00000524288 TBR1Q16650 682 aa7.22□□□□□ -1.25
SKP1-213ENST00000524288 C19orf54Q5BKX5 351 aa7.22□□□□□ -1.25
SKP1-213ENST00000524288 SPDYAQ5MJ70 313 aa7.22□□□□□ -1.25
SKP1-213ENST00000524288 PRAMEF14Q5SWL7 426 aa7.22□□□□□ -1.25
SKP1-213ENST00000524288 AGBL4Q5VU57 503 aa7.22□□□□□ -1.25
SKP1-213ENST00000524288 C1orf228Q6PIY5 440 aa7.22□□□□□ -1.25
SKP1-213ENST00000524288 TSHZ1Q6ZSZ6 1077 aa7.22□□□□□ -1.25
SKP1-213ENST00000524288 POLNQ7Z5Q5 900 aa7.22□□□□□ -1.25
SKP1-213ENST00000524288 ANKRD53Q8N9V6 530 aa7.22□□□□□ -1.25
SKP1-213ENST00000524288 PNPOQ9NVS9 261 aa7.22□□□□□ -1.25
SKP1-213ENST00000524288 FEZ2Q9UHY8 353 aaPredicted RBP7.22□□□□□ -1.25
SKP1-213ENST00000524288 PCDHA6Q9UN73 950 aa7.22□□□□□ -1.25
SKP1-213ENST00000524288 CTDP1Q9Y5B0 961 aaPredicted RBP7.22□□□□□ -1.25
SKP1-213ENST00000524288 SNX13Q9Y5W8 968 aa7.22□□□□□ -1.25
SKP1-213ENST00000524288 RPS19P39019 145 aaKnown RBP7.21□□□□□ -1.26
SKP1-213ENST00000524288 CASRP41180 1078 aa7.21□□□□□ -1.26
SKP1-213ENST00000524288 TRAPPC10P48553 1259 aa7.21□□□□□ -1.26
SKP1-213ENST00000524288 PRIM2P49643 509 aa7.21□□□□□ -1.26
SKP1-213ENST00000524288 SESN2P58004 480 aaPredicted RBP7.21□□□□□ -1.26
SKP1-213ENST00000524288 DUSP2Q05923 314 aa7.21□□□□□ -1.26
SKP1-213ENST00000524288 IFIT5Q13325 482 aaKnown RBP7.21□□□□□ -1.26
SKP1-213ENST00000524288 POLD3Q15054 466 aaPredicted RBP7.21□□□□□ -1.26
SKP1-213ENST00000524288 USP30Q70CQ3 517 aa7.21□□□□□ -1.26
SKP1-213ENST00000524288 C11orf96Q7Z7L8 435 aa7.21□□□□□ -1.26
SKP1-213ENST00000524288 FUKQ8N0W3 1084 aa7.21□□□□□ -1.26
SKP1-213ENST00000524288 MTFMTQ96DP5 389 aaKnown RBP7.21□□□□□ -1.26
SKP1-213ENST00000524288 SORCS2Q96PQ0 1159 aa7.21□□□□□ -1.26
SKP1-213ENST00000524288 PPCSQ9HAB8 311 aa7.21□□□□□ -1.26
SKP1-213ENST00000524288 PLCB1Q9NQ66 1216 aa7.21□□□□□ -1.26
SKP1-213ENST00000524288 TPCN1Q9ULQ1 816 aa7.21□□□□□ -1.26
SKP1-213ENST00000524288 USP19O94966 1318 aa7.21□□□□□ -1.26
SKP1-213ENST00000524288 A0A1W2PPL8 197 aa7.2□□□□□ -1.26
SKP1-213ENST00000524288 RHPN2P1A8MT19 583 aa7.2□□□□□ -1.26
SKP1-213ENST00000524288 IFRD1O00458 451 aaPredicted RBP7.2□□□□□ -1.26
SKP1-213ENST00000524288 CDC14BO60729 498 aa7.2□□□□□ -1.26
SKP1-213ENST00000524288 MYF5P13349 255 aa7.2□□□□□ -1.26
SKP1-213ENST00000524288 ZKSCAN1P17029 563 aaPredicted RBP7.2□□□□□ -1.26
SKP1-213ENST00000524288 SMARCA1P28370 1054 aa7.2□□□□□ -1.26
SKP1-213ENST00000524288 ACVRL1P37023 503 aa7.2□□□□□ -1.26
SKP1-213ENST00000524288 GPSM2P81274 684 aa7.2□□□□□ -1.26
SKP1-213ENST00000524288 RAB39AQ14964 217 aa7.2□□□□□ -1.26
SKP1-213ENST00000524288 FLYWCH1Q4VC44 716 aa7.2□□□□□ -1.26
SKP1-213ENST00000524288 TOGARAM2Q6ZUX3 1019 aa7.2□□□□□ -1.26
SKP1-213ENST00000524288 PPP1R3BQ86XI6 285 aa7.2□□□□□ -1.26
SKP1-213ENST00000524288 LIX1LQ8IVB5 337 aa7.2□□□□□ -1.26
SKP1-213ENST00000524288 Q8N1X5 172 aa7.2□□□□□ -1.26
SKP1-213ENST00000524288 DCBLD1Q8N8Z6 715 aa7.2□□□□□ -1.26
SKP1-213ENST00000524288 IL31RAQ8NI17 732 aa7.2□□□□□ -1.26
SKP1-213ENST00000524288 SLC7A6OSQ96CW6 309 aaPredicted RBP7.2□□□□□ -1.26
SKP1-213ENST00000524288 CCDC138Q96M89 665 aa7.2□□□□□ -1.26
SKP1-213ENST00000524288 ADOQ96SZ5 270 aa7.2□□□□□ -1.26
SKP1-213ENST00000524288 C1orf43Q9BWL3 253 aa7.2□□□□□ -1.26
SKP1-213ENST00000524288 NUP62CLQ9H1M0 184 aa7.2□□□□□ -1.26
SKP1-213ENST00000524288 OR10A2Q9H208 303 aa7.2□□□□□ -1.26
SKP1-213ENST00000524288 SLAMF7Q9NQ25 335 aa7.2□□□□□ -1.26
SKP1-213ENST00000524288 TMEM140Q9NV12 185 aa7.2□□□□□ -1.26
SKP1-213ENST00000524288 ZMYM3Q14202 1370 aa7.2□□□□□ -1.26
SKP1-213ENST00000524288 PMS2P1A4D2B8 440 aa7.19□□□□□ -1.26
SKP1-213ENST00000524288 PHGDHO43175 533 aaKnown RBP7.19□□□□□ -1.26
SKP1-213ENST00000524288 AHSGP02765 367 aa7.19□□□□□ -1.26
SKP1-213ENST00000524288 RAP2AP10114 183 aa7.19□□□□□ -1.26
SKP1-213ENST00000524288 SLC7A1P30825 629 aa7.19□□□□□ -1.26
SKP1-213ENST00000524288 GUCY1A2P33402 732 aa7.19□□□□□ -1.26
SKP1-213ENST00000524288 CRHR1P34998 444 aa7.19□□□□□ -1.26
SKP1-213ENST00000524288 ALDH1A3P47895 512 aa7.19□□□□□ -1.26
SKP1-213ENST00000524288 TM4SF4P48230 202 aa7.19□□□□□ -1.26
SKP1-213ENST00000524288 WNT3AP56704 352 aa7.19□□□□□ -1.26
SKP1-213ENST00000524288 ATP8B2P98198 1209 aa7.19□□□□□ -1.26
SKP1-213ENST00000524288 CHAF1AQ13111 956 aaPredicted RBP7.19□□□□□ -1.26
SKP1-213ENST00000524288 STK3Q13188 491 aa7.19□□□□□ -1.26
SKP1-213ENST00000524288 DUSP8Q13202 625 aa7.19□□□□□ -1.26
SKP1-213ENST00000524288 MTM1Q13496 603 aa7.19□□□□□ -1.26
SKP1-213ENST00000524288 DHX8Q14562 1220 aaKnown RBP7.19□□□□□ -1.26
SKP1-213ENST00000524288 GRAMD1BQ3KR37 738 aa7.19□□□□□ -1.26
SKP1-213ENST00000524288 ACRBPQ8NEB7 543 aa7.19□□□□□ -1.26
SKP1-213ENST00000524288 FAM89AQ96GI7 184 aa7.19□□□□□ -1.26
SKP1-213ENST00000524288 RIPOR3Q96MK2 946 aa7.19□□□□□ -1.26
SKP1-213ENST00000524288 CDC5LQ99459 802 aaKnown RBP7.19□□□□□ -1.26
SKP1-213ENST00000524288 DPYSL5Q9BPU6 564 aa7.19□□□□□ -1.26
SKP1-213ENST00000524288 MATN2O00339 956 aa7.18□□□□□ -1.26
SKP1-213ENST00000524288 FOSP01100 380 aaPredicted RBP7.18□□□□□ -1.26
SKP1-213ENST00000524288 AMHP03971 560 aa7.18□□□□□ -1.26
SKP1-213ENST00000524288 CD1AP06126 327 aa7.18□□□□□ -1.26
SKP1-213ENST00000524288 GYPEP15421 78 aa7.18□□□□□ -1.26
SKP1-213ENST00000524288 NPR1P16066 1061 aa7.18□□□□□ -1.26
SKP1-213ENST00000524288 PHKA1P46020 1223 aa7.18□□□□□ -1.26
SKP1-213ENST00000524288 LONRF3Q496Y0 759 aa7.18□□□□□ -1.26
SKP1-213ENST00000524288 KHDC1LQ5JSQ8 128 aa7.18□□□□□ -1.26
SKP1-213ENST00000524288 KRT78Q8N1N4 520 aa7.18□□□□□ -1.26
SKP1-213ENST00000524288 OR5M3Q8NGP4 307 aa7.18□□□□□ -1.26
SKP1-213ENST00000524288 CFHR4Q92496 578 aa7.18□□□□□ -1.26
SKP1-213ENST00000524288 PGBD4Q96DM1 585 aa7.18□□□□□ -1.26
SKP1-213ENST00000524288 CYFIP2Q96F07 1278 aa7.18□□□□□ -1.26
SKP1-213ENST00000524288 CEP95Q96GE4 821 aa7.18□□□□□ -1.26
SKP1-213ENST00000524288 APIPQ96GX9 242 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms