RNA–Protein interactions for RNA: ENST00000524213.5

CSGALNACT1-216, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-216ENST00000524213 CDCA3Q99618 268 aaPredicted RBP18.03■□□□□ 0.48
CSGALNACT1-216ENST00000524213 CBWD1Q9BRT8 395 aa18.03■□□□□ 0.48
CSGALNACT1-216ENST00000524213 FAM213AQ9BRX8 229 aa18.03■□□□□ 0.48
CSGALNACT1-216ENST00000524213 AGPAT3Q9NRZ7 376 aa18.03■□□□□ 0.48
CSGALNACT1-216ENST00000524213 CLEC1BQ9P126 229 aa18.03■□□□□ 0.48
CSGALNACT1-216ENST00000524213 CACNG4Q9UBN1 327 aa18.03■□□□□ 0.48
CSGALNACT1-216ENST00000524213 ADAM28Q9UKQ2 775 aa18.03■□□□□ 0.48
CSGALNACT1-216ENST00000524213 BARX2Q9UMQ3 279 aaPredicted RBP18.03■□□□□ 0.48
CSGALNACT1-216ENST00000524213 SSX2IPQ9Y2D8 614 aa18.03■□□□□ 0.48
CSGALNACT1-216ENST00000524213 PCDHA5Q9Y5H7 936 aa18.03■□□□□ 0.48
CSGALNACT1-216ENST00000524213 C2orf71A6NGG8 1288 aa18.02■□□□□ 0.48
CSGALNACT1-216ENST00000524213 TMEM189-UBE2V1I3L0A0 370 aa18.02■□□□□ 0.48
CSGALNACT1-216ENST00000524213 TGFB1I1O43294 461 aa18.02■□□□□ 0.48
CSGALNACT1-216ENST00000524213 CXCL14O95715 111 aa18.02■□□□□ 0.48
CSGALNACT1-216ENST00000524213 CTSAP10619 480 aa18.02■□□□□ 0.48
CSGALNACT1-216ENST00000524213 ELAVL2Q12926 359 aaKnown RBP18.02■□□□□ 0.48
CSGALNACT1-216ENST00000524213 FUT10Q6P4F1 479 aa18.02■□□□□ 0.48
CSGALNACT1-216ENST00000524213 CRELD2Q6UXH1 353 aaPredicted RBP18.02■□□□□ 0.48
CSGALNACT1-216ENST00000524213 BRSK2Q8IWQ3 736 aa18.02■□□□□ 0.48
CSGALNACT1-216ENST00000524213 GUF1Q8N442 669 aaKnown RBP18.02■□□□□ 0.48
CSGALNACT1-216ENST00000524213 BEST2Q8NFU1 509 aa18.02■□□□□ 0.48
CSGALNACT1-216ENST00000524213 SPATA20Q8TB22 786 aa18.02■□□□□ 0.48
CSGALNACT1-216ENST00000524213 SAAL1Q96ER3 474 aa18.02■□□□□ 0.48
CSGALNACT1-216ENST00000524213 MSLNLQ96KJ4 702 aa18.02■□□□□ 0.48
CSGALNACT1-216ENST00000524213 HERC2P3Q9BVR0 1158 aa18.02■□□□□ 0.48
CSGALNACT1-216ENST00000524213 PCIF1Q9H4Z3 704 aa18.02■□□□□ 0.48
CSGALNACT1-216ENST00000524213 HSPBP1Q9NZL4 362 aa18.02■□□□□ 0.48
CSGALNACT1-216ENST00000524213 CD207Q9UJ71 328 aa18.02■□□□□ 0.48
CSGALNACT1-216ENST00000524213 PLXNA3P51805 1871 aa18.01■□□□□ 0.47
CSGALNACT1-216ENST00000524213 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.01■□□□□ 0.47
CSGALNACT1-216ENST00000524213 ZNF233A6NK53 670 aa18.01■□□□□ 0.47
CSGALNACT1-216ENST00000524213 PDXKO00764 312 aa18.01■□□□□ 0.47
CSGALNACT1-216ENST00000524213 MEFVO15553 781 aaPredicted RBP18.01■□□□□ 0.47
CSGALNACT1-216ENST00000524213 CALUO43852 315 aaPredicted RBP18.01■□□□□ 0.47
CSGALNACT1-216ENST00000524213 SOD2P04179 222 aa18.01■□□□□ 0.47
CSGALNACT1-216ENST00000524213 KCNC3Q14003 757 aa18.01■□□□□ 0.47
CSGALNACT1-216ENST00000524213 SURF1Q15526 300 aa18.01■□□□□ 0.47
CSGALNACT1-216ENST00000524213 ZBTB6Q15916 424 aa18.01■□□□□ 0.47
CSGALNACT1-216ENST00000524213 PUS10Q3MIT2 529 aaKnown RBP18.01■□□□□ 0.47
CSGALNACT1-216ENST00000524213 LLGL2Q6P1M3 1020 aa18.01■□□□□ 0.47
CSGALNACT1-216ENST00000524213 XXYLT1Q8NBI6 393 aa18.01■□□□□ 0.47
CSGALNACT1-216ENST00000524213 RABGGTAQ92696 567 aa18.01■□□□□ 0.47
CSGALNACT1-216ENST00000524213 C2CD2Q9Y426 696 aa18.01■□□□□ 0.47
CSGALNACT1-216ENST00000524213 MUC3AQ02505 3323 aa18.01■□□□□ 0.47
CSGALNACT1-216ENST00000524213 SF3B1O75533 1304 aaKnown RBP eCLIP18■□□□□ 0.47
CSGALNACT1-216ENST00000524213 GOLGA8IPA6NC78 632 aa18■□□□□ 0.47
CSGALNACT1-216ENST00000524213 GOLGA8JA6NMD2 632 aa18■□□□□ 0.47
CSGALNACT1-216ENST00000524213 PODXLO00592 558 aa18■□□□□ 0.47
CSGALNACT1-216ENST00000524213 CLIC2O15247 247 aa18■□□□□ 0.47
CSGALNACT1-216ENST00000524213 MBTPS2O43462 519 aa18■□□□□ 0.47
CSGALNACT1-216ENST00000524213 TRAPPC3O43617 180 aa18■□□□□ 0.47
CSGALNACT1-216ENST00000524213 B3GAT3O94766 335 aa18■□□□□ 0.47
CSGALNACT1-216ENST00000524213 LRPAP1P30533 357 aa18■□□□□ 0.47
CSGALNACT1-216ENST00000524213 PPP1R2P41236 205 aa18■□□□□ 0.47
CSGALNACT1-216ENST00000524213 CLCNKBP51801 687 aa18■□□□□ 0.47
CSGALNACT1-216ENST00000524213 MYBPC2Q14324 1141 aa18■□□□□ 0.47
CSGALNACT1-216ENST00000524213 TMEM132DQ14C87 1099 aa18■□□□□ 0.47
CSGALNACT1-216ENST00000524213 PTPN14Q15678 1187 aa18■□□□□ 0.47
CSGALNACT1-216ENST00000524213 UPP1Q16831 310 aa18■□□□□ 0.47
CSGALNACT1-216ENST00000524213 COBLL1Q53SF7 1204 aa18■□□□□ 0.47
CSGALNACT1-216ENST00000524213 ZNF658Q5TYW1 1059 aaPredicted RBP18■□□□□ 0.47
CSGALNACT1-216ENST00000524213 JADE1Q6IE81 842 aa18■□□□□ 0.47
CSGALNACT1-216ENST00000524213 TAS1R1Q7RTX1 841 aa18■□□□□ 0.47
CSGALNACT1-216ENST00000524213 GPR65Q8IYL9 337 aa18■□□□□ 0.47
CSGALNACT1-216ENST00000524213 RNF168Q8IYW5 571 aaPredicted RBP18■□□□□ 0.47
CSGALNACT1-216ENST00000524213 NOC3LQ8WTT2 800 aaKnown RBP18■□□□□ 0.47
CSGALNACT1-216ENST00000524213 PAAF1Q9BRP4 392 aa18■□□□□ 0.47
CSGALNACT1-216ENST00000524213 KCTD10Q9H3F6 313 aa18■□□□□ 0.47
CSGALNACT1-216ENST00000524213 RBAKQ9NYW8 714 aaPredicted RBP18■□□□□ 0.47
CSGALNACT1-216ENST00000524213 TRAF3IP3Q9Y228 551 aa18■□□□□ 0.47
CSGALNACT1-216ENST00000524213 IRAK3Q9Y616 596 aa18■□□□□ 0.47
CSGALNACT1-216ENST00000524213 TNFRSF10AO00220 468 aa17.99■□□□□ 0.47
CSGALNACT1-216ENST00000524213 CLASP2O75122 1294 aaKnown RBP17.99■□□□□ 0.47
CSGALNACT1-216ENST00000524213 KIF4AO95239 1232 aa17.99■□□□□ 0.47
CSGALNACT1-216ENST00000524213 EFEMP2O95967 443 aa17.99■□□□□ 0.47
CSGALNACT1-216ENST00000524213 URODP06132 367 aa17.99■□□□□ 0.47
CSGALNACT1-216ENST00000524213 PAX3P23760 479 aa17.99■□□□□ 0.47
CSGALNACT1-216ENST00000524213 SOX4Q06945 474 aaPredicted RBP17.99■□□□□ 0.47
CSGALNACT1-216ENST00000524213 SMAD4Q13485 552 aaKnown RBP17.99■□□□□ 0.47
CSGALNACT1-216ENST00000524213 USP41Q3LFD5 358 aa17.99■□□□□ 0.47
CSGALNACT1-216ENST00000524213 SPATA1Q5VX52 437 aa17.99■□□□□ 0.47
CSGALNACT1-216ENST00000524213 KIAA1841Q6NSI8 718 aa17.99■□□□□ 0.47
CSGALNACT1-216ENST00000524213 SLC9A9Q8IVB4 645 aa17.99■□□□□ 0.47
CSGALNACT1-216ENST00000524213 CACTINQ8WUQ7 758 aaKnown RBP17.99■□□□□ 0.47
CSGALNACT1-216ENST00000524213 TMEM174Q8WUU8 243 aa17.99■□□□□ 0.47
CSGALNACT1-216ENST00000524213 FBXL18Q96ME1 805 aa17.99■□□□□ 0.47
CSGALNACT1-216ENST00000524213 GOLGA2P5Q9HBQ8 144 aa17.99■□□□□ 0.47
CSGALNACT1-216ENST00000524213 MRPL17Q9NRX2 175 aaKnown RBP17.99■□□□□ 0.47
CSGALNACT1-216ENST00000524213 LMBRD1Q9NUN5 540 aa17.99■□□□□ 0.47
CSGALNACT1-216ENST00000524213 VWA8A3KMH1 1905 aa17.99■□□□□ 0.47
CSGALNACT1-216ENST00000524213 EXOC3O60645 756 aa17.98■□□□□ 0.47
CSGALNACT1-216ENST00000524213 GLUD2P49448 558 aa17.98■□□□□ 0.47
CSGALNACT1-216ENST00000524213 CYP2J2P51589 502 aa17.98■□□□□ 0.47
CSGALNACT1-216ENST00000524213 SPAG1Q07617 926 aa17.98■□□□□ 0.47
CSGALNACT1-216ENST00000524213 NFIL3Q16649 462 aa17.98■□□□□ 0.47
CSGALNACT1-216ENST00000524213 PDXDC1Q6P996 788 aa17.98■□□□□ 0.47
CSGALNACT1-216ENST00000524213 TMEM184AQ6ZMB5 413 aa17.98■□□□□ 0.47
CSGALNACT1-216ENST00000524213 SMRP1Q8NCR6 262 aa17.98■□□□□ 0.47
CSGALNACT1-216ENST00000524213 C18orf25Q96B23 403 aaPredicted RBP17.98■□□□□ 0.47
CSGALNACT1-216ENST00000524213 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms