RNA–Protein interactions for RNA: ENST00000523655.1

SREK1-213, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 5

Gene SREK1, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-213	ENST00000523655	FAM102B	Q5T8I3	360 aa		5.92	□□□□□ -1.46
SREK1-213	ENST00000523655	NAIF1	Q69YI7	327 aa	Predicted RBP	5.92	□□□□□ -1.46
SREK1-213	ENST00000523655	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	5.92	□□□□□ -1.46
SREK1-213	ENST00000523655	MRGPRG	Q86SM5	289 aa		5.92	□□□□□ -1.46
SREK1-213	ENST00000523655	SYT12	Q8IV01	421 aa		5.92	□□□□□ -1.46
SREK1-213	ENST00000523655	ULK2	Q8IYT8	1036 aa		5.92	□□□□□ -1.46
SREK1-213	ENST00000523655	CLRN3	Q8NCR9	226 aa		5.92	□□□□□ -1.46
SREK1-213	ENST00000523655	FBXO18	Q8NFZ0	1043 aa		5.92	□□□□□ -1.46
SREK1-213	ENST00000523655	MDM1	Q8TC05	714 aa		5.92	□□□□□ -1.46
SREK1-213	ENST00000523655	HAS1	Q92839	578 aa		5.92	□□□□□ -1.46
SREK1-213	ENST00000523655	SMAD5	Q99717	465 aa	Known RBP	5.92	□□□□□ -1.46
SREK1-213	ENST00000523655	UBA5	Q9GZZ9	404 aa		5.92	□□□□□ -1.46
SREK1-213	ENST00000523655	EIF2B4	Q9UI10	523 aa	Known RBP	5.92	□□□□□ -1.46
SREK1-213	ENST00000523655	SPEF1	Q9Y4P9	236 aa		5.92	□□□□□ -1.46
SREK1-213	ENST00000523655	MIA2	Q96PC5	1412 aa		5.91	□□□□□ -1.46
SREK1-213	ENST00000523655	UTRN	P46939	3433 aa		5.91	□□□□□ -1.46
SREK1-213	ENST00000523655	MAP3K1	Q13233	1512 aa		5.91	□□□□□ -1.46
SREK1-213	ENST00000523655	NRP1	O14786	923 aa		5.91	□□□□□ -1.46
SREK1-213	ENST00000523655	ADCY6	O43306	1168 aa		5.91	□□□□□ -1.46
SREK1-213	ENST00000523655	PEX11B	O96011	259 aa		5.91	□□□□□ -1.46
SREK1-213	ENST00000523655	LDHA	P00338	332 aa	Known RBP	5.91	□□□□□ -1.46
SREK1-213	ENST00000523655	CDK17	Q00537	523 aa		5.91	□□□□□ -1.46
SREK1-213	ENST00000523655	MBNL2	Q5VZF2	373 aa	Known RBP	5.91	□□□□□ -1.46
SREK1-213	ENST00000523655	LAIR1	Q6GTX8	287 aa		5.91	□□□□□ -1.46
SREK1-213	ENST00000523655	RHOU	Q7L0Q8	258 aa		5.91	□□□□□ -1.46
SREK1-213	ENST00000523655	ZBTB46	Q86UZ6	589 aa		5.91	□□□□□ -1.46
SREK1-213	ENST00000523655	RASSF3	Q86WH2	238 aa		5.91	□□□□□ -1.46
SREK1-213	ENST00000523655	TICAM2	Q86XR7	235 aa		5.91	□□□□□ -1.46
SREK1-213	ENST00000523655	GLB1L3	Q8NCI6	653 aa	Predicted RBP	5.91	□□□□□ -1.46
SREK1-213	ENST00000523655	RNF169	Q8NCN4	708 aa		5.91	□□□□□ -1.46
SREK1-213	ENST00000523655	TGFBRAP1	Q8WUH2	860 aa		5.91	□□□□□ -1.46
SREK1-213	ENST00000523655	USP7	Q93009	1102 aa		5.91	□□□□□ -1.46
SREK1-213	ENST00000523655	CEP95	Q96GE4	821 aa		5.91	□□□□□ -1.46
SREK1-213	ENST00000523655	MPHOSPH6	Q99547	160 aa	Known RBP	5.91	□□□□□ -1.46
SREK1-213	ENST00000523655	SPON1	Q9HCB6	807 aa		5.91	□□□□□ -1.46
SREK1-213	ENST00000523655	AASDHPPT	Q9NRN7	309 aa		5.91	□□□□□ -1.46
SREK1-213	ENST00000523655	CDY2A	Q9Y6F7	541 aa		5.91	□□□□□ -1.46
SREK1-213	ENST00000523655	NINL	Q9Y2I6	1382 aa		5.91	□□□□□ -1.46
SREK1-213	ENST00000523655	ATP7A	Q04656	1500 aa		5.9	□□□□□ -1.46
SREK1-213	ENST00000523655	GABRD	O14764	452 aa		5.9	□□□□□ -1.46
SREK1-213	ENST00000523655	FOXN1	O15353	648 aa		5.9	□□□□□ -1.46
SREK1-213	ENST00000523655	NRP2	O60462	931 aa		5.9	□□□□□ -1.46
SREK1-213	ENST00000523655	RAMP2	O60895	175 aa		5.9	□□□□□ -1.46
SREK1-213	ENST00000523655	PPFIA4	O75335	1185 aa		5.9	□□□□□ -1.46
SREK1-213	ENST00000523655	RFPL1	O75677	317 aa		5.9	□□□□□ -1.46
SREK1-213	ENST00000523655	ABLIM3	O94929	683 aa		5.9	□□□□□ -1.46
SREK1-213	ENST00000523655	LTA4H	P09960	611 aa	Known RBP	5.9	□□□□□ -1.46
SREK1-213	ENST00000523655	GPR15	P49685	360 aa		5.9	□□□□□ -1.46
SREK1-213	ENST00000523655	NRG3	P56975	720 aa		5.9	□□□□□ -1.46
SREK1-213	ENST00000523655	APBA1	Q02410	837 aa		5.9	□□□□□ -1.46
SREK1-213	ENST00000523655	COL10A1	Q03692	680 aa		5.9	□□□□□ -1.46
SREK1-213	ENST00000523655	MLC1	Q15049	377 aa		5.9	□□□□□ -1.46
SREK1-213	ENST00000523655	LONRF3	Q496Y0	759 aa		5.9	□□□□□ -1.46
SREK1-213	ENST00000523655	DCAF17	Q5H9S7	520 aa	Predicted RBP	5.9	□□□□□ -1.46
SREK1-213	ENST00000523655	PPP4R4	Q6NUP7	873 aa		5.9	□□□□□ -1.46
SREK1-213	ENST00000523655	FAM83A	Q86UY5	434 aa		5.9	□□□□□ -1.46
SREK1-213	ENST00000523655	MAGEB6	Q8N7X4	407 aa		5.9	□□□□□ -1.46
SREK1-213	ENST00000523655	REPS2	Q8NFH8	660 aa		5.9	□□□□□ -1.46
SREK1-213	ENST00000523655	OR14C36	Q8NHC7	312 aa		5.9	□□□□□ -1.46
SREK1-213	ENST00000523655	PROKR1	Q8TCW9	393 aa		5.9	□□□□□ -1.46
SREK1-213	ENST00000523655	LRRC59	Q96AG4	307 aa	Known RBP	5.9	□□□□□ -1.46
SREK1-213	ENST00000523655	TTC1	Q99614	292 aa		5.9	□□□□□ -1.46
SREK1-213	ENST00000523655	NDC1	Q9BTX1	674 aa		5.9	□□□□□ -1.46
SREK1-213	ENST00000523655	TRPM5	Q9NZQ8	1165 aa		5.9	□□□□□ -1.46
SREK1-213	ENST00000523655	TRHDE	Q9UKU6	1024 aa		5.9	□□□□□ -1.46
SREK1-213	ENST00000523655	HDAC5	Q9UQL6	1122 aa		5.9	□□□□□ -1.46
SREK1-213	ENST00000523655	ZC3H13	Q5T200	1668 aa	Known RBP	5.9	□□□□□ -1.47
SREK1-213	ENST00000523655	CAMTA1	Q9Y6Y1	1673 aa		5.9	□□□□□ -1.47
SREK1-213	ENST00000523655	ATRN	O75882	1429 aa		5.9	□□□□□ -1.47
SREK1-213	ENST00000523655	GOLGA6C	A6NDK9	693 aa		5.89	□□□□□ -1.47
SREK1-213	ENST00000523655	GOLGA6B	A6NDN3	693 aa		5.89	□□□□□ -1.47
SREK1-213	ENST00000523655	ZNF185	O15231	689 aa		5.89	□□□□□ -1.47
SREK1-213	ENST00000523655	ZEB2	O60315	1214 aa		5.89	□□□□□ -1.47
SREK1-213	ENST00000523655	ITGA10	O75578	1167 aa		5.89	□□□□□ -1.47
SREK1-213	ENST00000523655	GOLGA6D	P0CG33	693 aa		5.89	□□□□□ -1.47
SREK1-213	ENST00000523655	CTSS	P25774	331 aa		5.89	□□□□□ -1.47
SREK1-213	ENST00000523655	RNASE9	P60153	205 aa	Known RBP	5.89	□□□□□ -1.47
SREK1-213	ENST00000523655	BRD3	Q15059	726 aa		5.89	□□□□□ -1.47
SREK1-213	ENST00000523655	RALBP1	Q15311	655 aa		5.89	□□□□□ -1.47
SREK1-213	ENST00000523655	SMN1	Q16637	294 aa	Known RBP	5.89	□□□□□ -1.47
SREK1-213	ENST00000523655	MFSD14B	Q5SR56	506 aa		5.89	□□□□□ -1.47
SREK1-213	ENST00000523655	SYDE2	Q5VT97	1194 aa		5.89	□□□□□ -1.47
SREK1-213	ENST00000523655	KRTAP5-3	Q6L8H2	238 aa		5.89	□□□□□ -1.47
SREK1-213	ENST00000523655	BTNL9	Q6UXG8	535 aa		5.89	□□□□□ -1.47
SREK1-213	ENST00000523655	GPRIN1	Q7Z2K8	1008 aa		5.89	□□□□□ -1.47
SREK1-213	ENST00000523655	GLB1L2	Q8IW92	636 aa		5.89	□□□□□ -1.47
SREK1-213	ENST00000523655	CNTD1	Q8N815	330 aa		5.89	□□□□□ -1.47
SREK1-213	ENST00000523655	SVIP	Q8NHG7	77 aa		5.89	□□□□□ -1.47
SREK1-213	ENST00000523655	FAM193B	Q96PV7	902 aa	Predicted RBP	5.89	□□□□□ -1.47
SREK1-213	ENST00000523655	KCNH6	Q9H252	994 aa		5.89	□□□□□ -1.47
SREK1-213	ENST00000523655	IFT22	Q9H7X7	185 aa		5.89	□□□□□ -1.47
SREK1-213	ENST00000523655	GOLGA6A	Q9NYA3	693 aa		5.89	□□□□□ -1.47
SREK1-213	ENST00000523655	ANKFY1	Q9P2R3	1169 aa		5.89	□□□□□ -1.47
SREK1-213	ENST00000523655	DPP7	Q9UHL4	492 aa		5.89	□□□□□ -1.47
SREK1-213	ENST00000523655	ZNF180	Q9UJW8	692 aa		5.89	□□□□□ -1.47
SREK1-213	ENST00000523655	NLRP1	Q9C000	1473 aa		5.89	□□□□□ -1.47
SREK1-213	ENST00000523655	CENPVL1	A0A0U1RR11	272 aa		5.88	□□□□□ -1.47
SREK1-213	ENST00000523655	IFRD1	O00458	451 aa	Predicted RBP	5.88	□□□□□ -1.47
SREK1-213	ENST00000523655	PRPF3	O43395	683 aa	Known RBP	5.88	□□□□□ -1.47
SREK1-213	ENST00000523655	PROZ	P22891	400 aa		5.88	□□□□□ -1.47

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