RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 GTF2BQ00403 316 aa17.69■□□□□ 0.42
CLN8-206ENST00000523237 PPP2R3AQ06190 1150 aa17.69■□□□□ 0.42
CLN8-206ENST00000523237 RAB33AQ14088 237 aa17.69■□□□□ 0.42
CLN8-206ENST00000523237 CCDC73Q6ZRK6 1079 aa17.69■□□□□ 0.42
CLN8-206ENST00000523237 SV2BQ7L1I2 683 aa17.69■□□□□ 0.42
CLN8-206ENST00000523237 DYMQ7RTS9 669 aa17.69■□□□□ 0.42
CLN8-206ENST00000523237 MAP4K3Q8IVH8 894 aa17.69■□□□□ 0.42
CLN8-206ENST00000523237 SUGP1Q8IWZ8 645 aaKnown RBP17.69■□□□□ 0.42
CLN8-206ENST00000523237 FIZ1Q96SL8 496 aa17.69■□□□□ 0.42
CLN8-206ENST00000523237 KCNH6Q9H252 994 aa17.69■□□□□ 0.42
CLN8-206ENST00000523237 ST6GALNAC4Q9H4F1 302 aa17.69■□□□□ 0.42
CLN8-206ENST00000523237 CDY1Q9Y6F8 540 aa17.69■□□□□ 0.42
CLN8-206ENST00000523237 A0A0B4J269 797 aa17.68■□□□□ 0.42
CLN8-206ENST00000523237 TTC26A0AVF1 554 aa17.68■□□□□ 0.42
CLN8-206ENST00000523237 SYN3O14994 580 aa17.68■□□□□ 0.42
CLN8-206ENST00000523237 C8AP07357 584 aa17.68■□□□□ 0.42
CLN8-206ENST00000523237 HNRNPA1P09651 372 aaKnown RBP eCLIP17.68■□□□□ 0.42
CLN8-206ENST00000523237 PDIA4P13667 645 aaKnown RBP17.68■□□□□ 0.42
CLN8-206ENST00000523237 HOXA9P31269 272 aa17.68■□□□□ 0.42
CLN8-206ENST00000523237 GBP2P32456 591 aaPredicted RBP17.68■□□□□ 0.42
CLN8-206ENST00000523237 TNFSF9P41273 254 aa17.68■□□□□ 0.42
CLN8-206ENST00000523237 STK38Q15208 465 aa17.68■□□□□ 0.42
CLN8-206ENST00000523237 PPM1LQ5SGD2 360 aa17.68■□□□□ 0.42
CLN8-206ENST00000523237 FBXL6Q8N531 539 aa17.68■□□□□ 0.42
CLN8-206ENST00000523237 DDX12PQ92771 950 aa17.68■□□□□ 0.42
CLN8-206ENST00000523237 KIF12Q96FN5 646 aa17.68■□□□□ 0.42
CLN8-206ENST00000523237 ZNF396Q96N95 335 aaPredicted RBP17.68■□□□□ 0.42
CLN8-206ENST00000523237 MSTO1Q9BUK6 570 aa17.68■□□□□ 0.42
CLN8-206ENST00000523237 RPF1Q9H9Y2 349 aaKnown RBP17.68■□□□□ 0.42
CLN8-206ENST00000523237 SEL1LQ9UBV2 794 aa17.68■□□□□ 0.42
CLN8-206ENST00000523237 ZNF318Q5VUA4 2279 aa17.68■□□□□ 0.42
CLN8-206ENST00000523237 DOCK8Q8NF50 2099 aa17.67■□□□□ 0.42
CLN8-206ENST00000523237 XPOTO43592 962 aaKnown RBP17.67■□□□□ 0.42
CLN8-206ENST00000523237 FAM189A1O60320 539 aa17.67■□□□□ 0.42
CLN8-206ENST00000523237 MCM4P33991 863 aa17.67■□□□□ 0.42
CLN8-206ENST00000523237 STAT6P42226 847 aa17.67■□□□□ 0.42
CLN8-206ENST00000523237 ZC2HC1CQ53FD0 456 aaPredicted RBP17.67■□□□□ 0.42
CLN8-206ENST00000523237 VARS2Q5ST30 1063 aaKnown RBP17.67■□□□□ 0.42
CLN8-206ENST00000523237 AXDND1Q5T1B0 1012 aaPredicted RBP17.67■□□□□ 0.42
CLN8-206ENST00000523237 SFR1Q86XK3 245 aa17.67■□□□□ 0.42
CLN8-206ENST00000523237 LINC00301Q8NCQ3 95 aa17.67■□□□□ 0.42
CLN8-206ENST00000523237 SLC7A14Q8TBB6 771 aa17.67■□□□□ 0.42
CLN8-206ENST00000523237 SUSD3Q96L08 255 aa17.67■□□□□ 0.42
CLN8-206ENST00000523237 TSPAN18Q96SJ8 248 aa17.67■□□□□ 0.42
CLN8-206ENST00000523237 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.67■□□□□ 0.42
CLN8-206ENST00000523237 TUBGCP4Q9UGJ1 667 aa17.67■□□□□ 0.42
CLN8-206ENST00000523237 UBQLN1Q9UMX0 589 aaKnown RBP17.67■□□□□ 0.42
CLN8-206ENST00000523237 ANK1P16157 1881 aa17.67■□□□□ 0.42
CLN8-206ENST00000523237 KMT2EQ8IZD2 1858 aa17.67■□□□□ 0.42
CLN8-206ENST00000523237 MYMKA6NI61 221 aa17.66■□□□□ 0.42
CLN8-206ENST00000523237 H7C4K7 107 aa17.66■□□□□ 0.42
CLN8-206ENST00000523237 N4BP1O75113 896 aaKnown RBP17.66■□□□□ 0.42
CLN8-206ENST00000523237 XYLBO75191 536 aa17.66■□□□□ 0.42
CLN8-206ENST00000523237 GAP43P17677 238 aa17.66■□□□□ 0.42
CLN8-206ENST00000523237 LRPAP1P30533 357 aa17.66■□□□□ 0.42
CLN8-206ENST00000523237 SPAG1Q07617 926 aa17.66■□□□□ 0.42
CLN8-206ENST00000523237 ENOX2Q16206 610 aaKnown RBP17.66■□□□□ 0.42
CLN8-206ENST00000523237 UVSSAQ2YD98 709 aa17.66■□□□□ 0.42
CLN8-206ENST00000523237 ZBTB41Q5SVQ8 909 aa17.66■□□□□ 0.42
CLN8-206ENST00000523237 SLFN12LQ6IEE8 588 aa17.66■□□□□ 0.42
CLN8-206ENST00000523237 SLC39A4Q6P5W5 647 aa17.66■□□□□ 0.42
CLN8-206ENST00000523237 RSPO2Q6UXX9 243 aaPredicted RBP17.66■□□□□ 0.42
CLN8-206ENST00000523237 RTL10Q7L3V2 364 aa17.66■□□□□ 0.42
CLN8-206ENST00000523237 ZNF720Q7Z2F6 126 aa17.66■□□□□ 0.42
CLN8-206ENST00000523237 CD302Q8IX05 232 aa17.66■□□□□ 0.42
CLN8-206ENST00000523237 HVCN1Q96D96 273 aa17.66■□□□□ 0.42
CLN8-206ENST00000523237 MRPL44Q9H9J2 332 aaKnown RBP17.66■□□□□ 0.42
CLN8-206ENST00000523237 KCNK12Q9HB15 430 aa17.66■□□□□ 0.42
CLN8-206ENST00000523237 IGSF9Q9P2J2 1179 aa17.66■□□□□ 0.42
CLN8-206ENST00000523237 EPS15L1Q9UBC2 864 aa17.66■□□□□ 0.42
CLN8-206ENST00000523237 DOCK6Q96HP0 2047 aa17.65■□□□□ 0.42
CLN8-206ENST00000523237 LACTBL1A8MY62 500 aa17.65■□□□□ 0.42
CLN8-206ENST00000523237 SPTLC2O15270 562 aa17.65■□□□□ 0.42
CLN8-206ENST00000523237 CYP3A5P20815 502 aa17.65■□□□□ 0.42
CLN8-206ENST00000523237 TDGQ13569 410 aa17.65■□□□□ 0.42
CLN8-206ENST00000523237 ZBTB6Q15916 424 aa17.65■□□□□ 0.42
CLN8-206ENST00000523237 SLC8B1Q6J4K2 584 aa17.65■□□□□ 0.42
CLN8-206ENST00000523237 GET4Q7L5D6 327 aaPredicted RBP17.65■□□□□ 0.42
CLN8-206ENST00000523237 GRASPQ7Z6J2 395 aaPredicted RBP17.65■□□□□ 0.42
CLN8-206ENST00000523237 APPL2Q8NEU8 664 aa17.65■□□□□ 0.42
CLN8-206ENST00000523237 DNAJC19Q96DA6 116 aa17.65■□□□□ 0.42
CLN8-206ENST00000523237 FAM212AQ96EL1 285 aa17.65■□□□□ 0.42
CLN8-206ENST00000523237 MYADMQ96S97 322 aa17.65■□□□□ 0.42
CLN8-206ENST00000523237 PANK2Q9BZ23 570 aa17.65■□□□□ 0.42
CLN8-206ENST00000523237 SMOC2Q9H3U7 446 aa17.65■□□□□ 0.42
CLN8-206ENST00000523237 TFIP11Q9UBB9 837 aaKnown RBP17.65■□□□□ 0.42
CLN8-206ENST00000523237 CPSF3Q9UKF6 684 aaKnown RBP17.65■□□□□ 0.42
CLN8-206ENST00000523237 POLIQ9UNA4 740 aa17.65■□□□□ 0.42
CLN8-206ENST00000523237 GTF3C3Q9Y5Q9 886 aa17.65■□□□□ 0.42
CLN8-206ENST00000523237 A0A087X0B3 334 aa17.64■□□□□ 0.41
CLN8-206ENST00000523237 ANKRD63C9JTQ0 380 aa17.64■□□□□ 0.41
CLN8-206ENST00000523237 CCL16O15467 120 aa17.64■□□□□ 0.41
CLN8-206ENST00000523237 PPP6R2O75170 966 aa17.64■□□□□ 0.41
CLN8-206ENST00000523237 YEATS4O95619 227 aa17.64■□□□□ 0.41
CLN8-206ENST00000523237 ADRB2P07550 413 aa17.64■□□□□ 0.41
CLN8-206ENST00000523237 POU2F2P09086 479 aa17.64■□□□□ 0.41
CLN8-206ENST00000523237 IDEP14735 1019 aa17.64■□□□□ 0.41
CLN8-206ENST00000523237 FSHRP23945 695 aa17.64■□□□□ 0.41
CLN8-206ENST00000523237 ROR1Q01973 937 aa17.64■□□□□ 0.41
CLN8-206ENST00000523237 MRPL58Q14197 206 aaKnown RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms