RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 TRIM49CP0CI26 452 aa12.92□□□□□ -0.34
PVT1-215ENST00000522963 KRT13P13646 458 aa12.92□□□□□ -0.34
PVT1-215ENST00000522963 SCNN1GP51170 649 aa12.92□□□□□ -0.34
PVT1-215ENST00000522963 VAMP7P51809 220 aa12.92□□□□□ -0.34
PVT1-215ENST00000522963 AFF1P51825 1210 aaKnown RBP12.92□□□□□ -0.34
PVT1-215ENST00000522963 TPM4P67936 248 aa12.92□□□□□ -0.34
PVT1-215ENST00000522963 DLG4P78352 724 aa12.92□□□□□ -0.34
PVT1-215ENST00000522963 BFSP1Q12934 665 aa12.92□□□□□ -0.34
PVT1-215ENST00000522963 XKR4Q5GH76 650 aa12.92□□□□□ -0.34
PVT1-215ENST00000522963 C1orf220Q5T0J3 134 aa12.92□□□□□ -0.34
PVT1-215ENST00000522963 KCNT2Q6UVM3 1135 aa12.92□□□□□ -0.34
PVT1-215ENST00000522963 TRIM59Q8IWR1 403 aa12.92□□□□□ -0.34
PVT1-215ENST00000522963 TMC2Q8TDI7 906 aa12.92□□□□□ -0.34
PVT1-215ENST00000522963 PARD3BQ8TEW8 1205 aa12.92□□□□□ -0.34
PVT1-215ENST00000522963 CCDC127Q96BQ5 260 aa12.92□□□□□ -0.34
PVT1-215ENST00000522963 FAM84AQ96KN4 292 aa12.92□□□□□ -0.34
PVT1-215ENST00000522963 ZFP42Q96MM3 310 aa12.92□□□□□ -0.34
PVT1-215ENST00000522963 RPS6KC1Q96S38 1066 aa12.92□□□□□ -0.34
PVT1-215ENST00000522963 POP1Q99575 1024 aaKnown RBP12.92□□□□□ -0.34
PVT1-215ENST00000522963 PLVAPQ9BX97 442 aa12.92□□□□□ -0.34
PVT1-215ENST00000522963 PLEKHA5Q9HAU0 1116 aa12.92□□□□□ -0.34
PVT1-215ENST00000522963 PLXNA4Q9HCM2 1894 aa12.92□□□□□ -0.34
PVT1-215ENST00000522963 UBN1Q9NPG3 1134 aa12.92□□□□□ -0.34
PVT1-215ENST00000522963 TOPORSQ9NS56 1045 aaPredicted RBP12.92□□□□□ -0.34
PVT1-215ENST00000522963 CNTN3Q9P232 1028 aa12.92□□□□□ -0.34
PVT1-215ENST00000522963 PLAGL2Q9UPG8 496 aa12.92□□□□□ -0.34
PVT1-215ENST00000522963 ARL5CA6NH57 179 aa12.91□□□□□ -0.34
PVT1-215ENST00000522963 LRRIQ3A6PVS8 624 aaPredicted RBP12.91□□□□□ -0.34
PVT1-215ENST00000522963 PTGESO14684 152 aa12.91□□□□□ -0.34
PVT1-215ENST00000522963 FGF18O76093 207 aa12.91□□□□□ -0.34
PVT1-215ENST00000522963 IL18RAPO95256 599 aa12.91□□□□□ -0.34
PVT1-215ENST00000522963 NFICP08651 508 aa12.91□□□□□ -0.34
PVT1-215ENST00000522963 DLATP10515 647 aaKnown RBP12.91□□□□□ -0.34
PVT1-215ENST00000522963 CDK11BP21127 795 aaKnown RBP12.91□□□□□ -0.34
PVT1-215ENST00000522963 EEF1GP26641 437 aaKnown RBP12.91□□□□□ -0.34
PVT1-215ENST00000522963 CA8P35219 290 aa12.91□□□□□ -0.34
PVT1-215ENST00000522963 MTIF2P46199 727 aaKnown RBP12.91□□□□□ -0.34
PVT1-215ENST00000522963 ALDH7A1P49419 539 aaKnown RBP12.91□□□□□ -0.34
PVT1-215ENST00000522963 BCAR1P56945 870 aa12.91□□□□□ -0.34
PVT1-215ENST00000522963 PPP2R3AQ06190 1150 aa12.91□□□□□ -0.34
PVT1-215ENST00000522963 ENPEPQ07075 957 aa12.91□□□□□ -0.34
PVT1-215ENST00000522963 SPAG1Q07617 926 aa12.91□□□□□ -0.34
PVT1-215ENST00000522963 KRT31Q15323 416 aa12.91□□□□□ -0.34
PVT1-215ENST00000522963 SURF1Q15526 300 aa12.91□□□□□ -0.34
PVT1-215ENST00000522963 LMBRD2Q68DH5 695 aaPredicted RBP12.91□□□□□ -0.34
PVT1-215ENST00000522963 EP400NLQ6ZTU2 488 aa12.91□□□□□ -0.34
PVT1-215ENST00000522963 APTXQ7Z2E3 356 aaKnown RBP12.91□□□□□ -0.34
PVT1-215ENST00000522963 ZNF280BQ86YH2 543 aa12.91□□□□□ -0.34
PVT1-215ENST00000522963 CD302Q8IX05 232 aa12.91□□□□□ -0.34
PVT1-215ENST00000522963 EFCAB13Q8IY85 973 aa12.91□□□□□ -0.34
PVT1-215ENST00000522963 GSTCDQ8NEC7 633 aa12.91□□□□□ -0.34
PVT1-215ENST00000522963 SPPL3Q8TCT6 385 aa12.91□□□□□ -0.34
PVT1-215ENST00000522963 MICAL1Q8TDZ2 1067 aa12.91□□□□□ -0.34
PVT1-215ENST00000522963 POF1BQ8WVV4 589 aa12.91□□□□□ -0.34
PVT1-215ENST00000522963 ZNF516Q92618 1163 aa12.91□□□□□ -0.34
PVT1-215ENST00000522963 SLC35C1Q96A29 364 aa12.91□□□□□ -0.34
PVT1-215ENST00000522963 MRPL38Q96DV4 380 aaKnown RBP12.91□□□□□ -0.34
PVT1-215ENST00000522963 ZMAT2Q96NC0 199 aaKnown RBP12.91□□□□□ -0.34
PVT1-215ENST00000522963 FNBP1Q96RU3 617 aa12.91□□□□□ -0.34
PVT1-215ENST00000522963 CGRRF1Q99675 332 aa12.91□□□□□ -0.34
PVT1-215ENST00000522963 ASB7Q9H672 318 aa12.91□□□□□ -0.34
PVT1-215ENST00000522963 NRDE2Q9H7Z3 1164 aa12.91□□□□□ -0.34
PVT1-215ENST00000522963 PRDM6Q9NQX0 595 aa12.91□□□□□ -0.34
PVT1-215ENST00000522963 MIOSQ9NXC5 875 aa12.91□□□□□ -0.34
PVT1-215ENST00000522963 TAB2Q9NYJ8 693 aa12.91□□□□□ -0.34
PVT1-215ENST00000522963 DNAJB4Q9UDY4 337 aa12.91□□□□□ -0.34
PVT1-215ENST00000522963 LIMA1Q9UHB6 759 aaKnown RBP12.91□□□□□ -0.34
PVT1-215ENST00000522963 PTPRJQ12913 1337 aa12.9□□□□□ -0.34
PVT1-215ENST00000522963 SMIM28A0A1B0GU29 152 aa12.9□□□□□ -0.34
PVT1-215ENST00000522963 INPPL1O15357 1258 aa12.9□□□□□ -0.34
PVT1-215ENST00000522963 DDHD2O94830 711 aa12.9□□□□□ -0.34
PVT1-215ENST00000522963 KCNE1P15382 129 aa12.9□□□□□ -0.34
PVT1-215ENST00000522963 CLDN10P78369 228 aa12.9□□□□□ -0.34
PVT1-215ENST00000522963 DCAF17Q5H9S7 520 aaPredicted RBP12.9□□□□□ -0.34
PVT1-215ENST00000522963 GLRA4Q5JXX5 417 aa12.9□□□□□ -0.34
PVT1-215ENST00000522963 TCERG1LQ5VWI1 586 aa12.9□□□□□ -0.34
PVT1-215ENST00000522963 JADE1Q6IE81 842 aa12.9□□□□□ -0.34
PVT1-215ENST00000522963 WDR49Q8IV35 697 aa12.9□□□□□ -0.34
PVT1-215ENST00000522963 TMEM130Q8N3G9 435 aa12.9□□□□□ -0.34
PVT1-215ENST00000522963 OR5B17Q8NGF7 314 aa12.9□□□□□ -0.34
PVT1-215ENST00000522963 KIF12Q96FN5 646 aa12.9□□□□□ -0.34
PVT1-215ENST00000522963 TUBGCP2Q9BSJ2 902 aa12.9□□□□□ -0.34
PVT1-215ENST00000522963 SPG21Q9NZD8 308 aa12.9□□□□□ -0.34
PVT1-215ENST00000522963 KANSL3Q9P2N6 904 aa12.9□□□□□ -0.34
PVT1-215ENST00000522963 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.9□□□□□ -0.34
PVT1-215ENST00000522963 CHD9Q3L8U1 2897 aa12.89□□□□□ -0.35
PVT1-215ENST00000522963 LRRC10BA6NIK2 292 aa12.89□□□□□ -0.35
PVT1-215ENST00000522963 B4GALT3O60512 393 aa12.89□□□□□ -0.35
PVT1-215ENST00000522963 PRKCSHP14314 528 aaPredicted RBP12.89□□□□□ -0.35
PVT1-215ENST00000522963 TNNI1P19237 187 aa12.89□□□□□ -0.35
PVT1-215ENST00000522963 POU3F3P20264 500 aaPredicted RBP12.89□□□□□ -0.35
PVT1-215ENST00000522963 DNAJB1P25685 340 aa12.89□□□□□ -0.35
PVT1-215ENST00000522963 PPM1AP35813 382 aa12.89□□□□□ -0.35
PVT1-215ENST00000522963 OR1G1P47890 313 aa12.89□□□□□ -0.35
PVT1-215ENST00000522963 SLC11A1P49279 550 aa12.89□□□□□ -0.35
PVT1-215ENST00000522963 COPB1P53618 953 aaKnown RBP12.89□□□□□ -0.35
PVT1-215ENST00000522963 TFAMQ00059 246 aaKnown RBP12.89□□□□□ -0.35
PVT1-215ENST00000522963 FANCCQ00597 558 aa12.89□□□□□ -0.35
PVT1-215ENST00000522963 KRT17Q04695 432 aa12.89□□□□□ -0.35
PVT1-215ENST00000522963 PPP3CAQ08209 521 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms