RNA–Protein interactions for RNA: ENST00000522719.2

NKX2-1-204, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 1,417 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-204ENST00000522719 MRE11P49959 708 aa27.72■■■□□ 2.03
NKX2-1-204ENST00000522719 MYL7Q01449 175 aa27.72■■■□□ 2.03
NKX2-1-204ENST00000522719 NAB2Q15742 525 aa27.72■■■□□ 2.03
NKX2-1-204ENST00000522719 TDRD10Q5VZ19 366 aaKnown RBP27.72■■■□□ 2.03
NKX2-1-204ENST00000522719 DPP3Q9NY33 737 aa27.72■■■□□ 2.03
NKX2-1-204ENST00000522719 ITGA11Q9UKX5 1188 aa27.72■■■□□ 2.03
NKX2-1-204ENST00000522719 COQ4Q9Y3A0 265 aa27.72■■■□□ 2.03
NKX2-1-204ENST00000522719 POMCP01189 267 aa27.71■■■□□ 2.03
NKX2-1-204ENST00000522719 UBXN1Q04323 297 aa27.71■■■□□ 2.03
NKX2-1-204ENST00000522719 BIRC3Q13489 604 aa27.71■■■□□ 2.03
NKX2-1-204ENST00000522719 GDF15Q99988 308 aa27.71■■■□□ 2.03
NKX2-1-204ENST00000522719 TRIM5Q9C035 493 aa27.71■■■□□ 2.03
NKX2-1-204ENST00000522719 TBC1D13Q9NVG8 400 aa27.71■■■□□ 2.03
NKX2-1-204ENST00000522719 TBKBP1A7MCY6 615 aa27.7■■■□□ 2.03
NKX2-1-204ENST00000522719 H0YGN5 161 aa27.7■■■□□ 2.03
NKX2-1-204ENST00000522719 PHACTR2O75167 634 aa27.7■■■□□ 2.03
NKX2-1-204ENST00000522719 GBP6Q6ZN66 633 aa27.7■■■□□ 2.03
NKX2-1-204ENST00000522719 C1orf127Q8N9H9 656 aa27.7■■■□□ 2.03
NKX2-1-204ENST00000522719 FBXL13Q8NEE6 735 aa27.7■■■□□ 2.03
NKX2-1-204ENST00000522719 C18orf25Q96B23 403 aaPredicted RBP27.7■■■□□ 2.03
NKX2-1-204ENST00000522719 ZNF689Q96CS4 500 aaPredicted RBP27.7■■■□□ 2.03
NKX2-1-204ENST00000522719 XPO4Q9C0E2 1151 aaKnown RBP27.7■■■□□ 2.03
NKX2-1-204ENST00000522719 TUBGCP4Q9UGJ1 667 aa27.7■■■□□ 2.03
NKX2-1-204ENST00000522719 PDE4DIPQ5VU43 2346 aa27.69■■■□□ 2.02
NKX2-1-204ENST00000522719 AP5Z1O43299 807 aa27.69■■■□□ 2.02
NKX2-1-204ENST00000522719 GJB5O95377 273 aa27.69■■■□□ 2.02
NKX2-1-204ENST00000522719 TUSC3Q13454 348 aa27.69■■■□□ 2.02
NKX2-1-204ENST00000522719 FAM84AQ96KN4 292 aa27.69■■■□□ 2.02
NKX2-1-204ENST00000522719 RC3H2Q9HBD1 1191 aaKnown RBP27.69■■■□□ 2.02
NKX2-1-204ENST00000522719 COL4A6Q14031 1691 aa27.69■■■□□ 2.02
NKX2-1-204ENST00000522719 LRPAP1P30533 357 aa27.68■■■□□ 2.02
NKX2-1-204ENST00000522719 GATMP50440 423 aa27.68■■■□□ 2.02
NKX2-1-204ENST00000522719 RNASELQ05823 741 aaKnown RBP27.68■■■□□ 2.02
NKX2-1-204ENST00000522719 SOX4Q06945 474 aaPredicted RBP27.68■■■□□ 2.02
NKX2-1-204ENST00000522719 EPC2Q52LR7 807 aa27.68■■■□□ 2.02
NKX2-1-204ENST00000522719 LRRC43Q8N309 656 aa27.68■■■□□ 2.02
NKX2-1-204ENST00000522719 UROC1Q96N76 676 aa27.68■■■□□ 2.02
NKX2-1-204ENST00000522719 FAM193BQ96PV7 902 aaPredicted RBP27.68■■■□□ 2.02
NKX2-1-204ENST00000522719 ERGIC2Q96RQ1 377 aa27.68■■■□□ 2.02
NKX2-1-204ENST00000522719 UBE2OQ9C0C9 1292 aaKnown RBP27.68■■■□□ 2.02
NKX2-1-204ENST00000522719 R3HCC1Q9Y3T6 440 aaKnown RBP27.68■■■□□ 2.02
NKX2-1-204ENST00000522719 SCN1AP35498 2009 aa27.68■■■□□ 2.02
NKX2-1-204ENST00000522719 TEX33O43247 280 aa27.67■■■□□ 2.02
NKX2-1-204ENST00000522719 ATP2A2P16615 1042 aaKnown RBP27.67■■■□□ 2.02
NKX2-1-204ENST00000522719 RPL9P32969 192 aaKnown RBP27.67■■■□□ 2.02
NKX2-1-204ENST00000522719 RBP5P82980 135 aa27.67■■■□□ 2.02
NKX2-1-204ENST00000522719 DSC1Q08554 894 aa27.67■■■□□ 2.02
NKX2-1-204ENST00000522719 TRPC3Q13507 836 aa27.67■■■□□ 2.02
NKX2-1-204ENST00000522719 NCOA4Q13772 614 aa27.67■■■□□ 2.02
NKX2-1-204ENST00000522719 EXOC3L4Q17RC7 722 aa27.67■■■□□ 2.02
NKX2-1-204ENST00000522719 CMTR2Q8IYT2 770 aaKnown RBP27.67■■■□□ 2.02
NKX2-1-204ENST00000522719 CXorf38Q8TB03 319 aa27.67■■■□□ 2.02
NKX2-1-204ENST00000522719 TAS1R2Q8TE23 839 aa27.67■■■□□ 2.02
NKX2-1-204ENST00000522719 DDX27Q96GQ7 796 aaKnown RBP27.67■■■□□ 2.02
NKX2-1-204ENST00000522719 RAB20Q9NX57 234 aa27.67■■■□□ 2.02
NKX2-1-204ENST00000522719 SIX4Q9UIU6 781 aa27.67■■■□□ 2.02
NKX2-1-204ENST00000522719 A0A1W2PQC6 194 aa27.67■■■□□ 2.02
NKX2-1-204ENST00000522719 ANO9A1A5B4 782 aa27.67■■■□□ 2.02
NKX2-1-204ENST00000522719 SLC34A2O95436 690 aa27.67■■■□□ 2.02
NKX2-1-204ENST00000522719 VNN1O95497 513 aa27.67■■■□□ 2.02
NKX2-1-204ENST00000522719 HLA-DRAP01903 254 aa27.67■■■□□ 2.02
NKX2-1-204ENST00000522719 ITGB3P05106 788 aa27.67■■■□□ 2.02
NKX2-1-204ENST00000522719 PIK3CAP42336 1068 aa27.67■■■□□ 2.02
NKX2-1-204ENST00000522719 HTRA4P83105 476 aaPredicted RBP27.67■■■□□ 2.02
NKX2-1-204ENST00000522719 C9orf50Q5SZB4 431 aa27.67■■■□□ 2.02
NKX2-1-204ENST00000522719 FAM117BQ6P1L5 589 aa27.67■■■□□ 2.02
NKX2-1-204ENST00000522719 TMCO2Q7Z6W1 182 aaPredicted RBP27.67■■■□□ 2.02
NKX2-1-204ENST00000522719 HERC6Q8IVU3 1022 aa27.67■■■□□ 2.02
NKX2-1-204ENST00000522719 RNPC3Q96LT9 517 aaKnown RBP27.67■■■□□ 2.02
NKX2-1-204ENST00000522719 GCNT4Q9P109 453 aa27.67■■■□□ 2.02
NKX2-1-204ENST00000522719 KRT19P08727 400 aa27.66■■■□□ 2.02
NKX2-1-204ENST00000522719 BMP8BP34820 402 aa27.66■■■□□ 2.02
NKX2-1-204ENST00000522719 GUCY2FP51841 1108 aa27.66■■■□□ 2.02
NKX2-1-204ENST00000522719 SHHQ15465 462 aa27.66■■■□□ 2.02
NKX2-1-204ENST00000522719 C9orf57Q5W0N0 161 aa27.66■■■□□ 2.02
NKX2-1-204ENST00000522719 EHBP1Q8NDI1 1231 aa27.66■■■□□ 2.02
NKX2-1-204ENST00000522719 MRFAP1L1Q96HT8 127 aa27.66■■■□□ 2.02
NKX2-1-204ENST00000522719 YME1L1Q96TA2 773 aa27.66■■■□□ 2.02
NKX2-1-204ENST00000522719 ZBED2Q9BTP6 218 aa27.66■■■□□ 2.02
NKX2-1-204ENST00000522719 AGAP1Q9UPQ3 857 aa27.66■■■□□ 2.02
NKX2-1-204ENST00000522719 INSL6Q9Y581 213 aa27.66■■■□□ 2.02
NKX2-1-204ENST00000522719 PIRO00625 290 aa27.65■■■□□ 2.02
NKX2-1-204ENST00000522719 ZC3H11AO75152 810 aaKnown RBP eCLIP27.65■■■□□ 2.02
NKX2-1-204ENST00000522719 CST3P01034 146 aaPredicted RBP27.65■■■□□ 2.02
NKX2-1-204ENST00000522719 POLR2BP30876 1174 aaKnown RBP27.65■■■□□ 2.02
NKX2-1-204ENST00000522719 ATICP31939 592 aa27.65■■■□□ 2.02
NKX2-1-204ENST00000522719 ZNF75DP51815 510 aa27.65■■■□□ 2.02
NKX2-1-204ENST00000522719 SGSM1Q2NKQ1 1148 aa27.65■■■□□ 2.02
NKX2-1-204ENST00000522719 ZNF280BQ86YH2 543 aa27.65■■■□□ 2.02
NKX2-1-204ENST00000522719 COLGALT2Q8IYK4 626 aa27.65■■■□□ 2.02
NKX2-1-204ENST00000522719 LRRC52Q8N7C0 313 aa27.65■■■□□ 2.02
NKX2-1-204ENST00000522719 CCDC150Q8NCX0 1101 aa27.65■■■□□ 2.02
NKX2-1-204ENST00000522719 LMO3Q8TAP4 145 aa27.65■■■□□ 2.02
NKX2-1-204ENST00000522719 TAF4BQ92750 862 aa27.65■■■□□ 2.02
NKX2-1-204ENST00000522719 CRACR2AQ9BSW2 395 aa27.65■■■□□ 2.02
NKX2-1-204ENST00000522719 IMPG2Q9BZV3 1241 aa27.65■■■□□ 2.02
NKX2-1-204ENST00000522719 GOLGA2P5Q9HBQ8 144 aa27.65■■■□□ 2.02
NKX2-1-204ENST00000522719 DDHD2O94830 711 aa27.64■■■□□ 2.02
NKX2-1-204ENST00000522719 PNPLA4P41247 253 aa27.64■■■□□ 2.02
NKX2-1-204ENST00000522719 KCNMA1Q12791 1236 aa27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms