RNA–Protein interactions for RNA: ENST00000522416.1

AP003550.1-201, humanhuman

TSL 3 BASIC

Gene AP003550.1, Length 414 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003550.1-201ENST00000522416 PCIF1Q9H4Z3 704 aa11.48□□□□□ -0.57
AP003550.1-201ENST00000522416 RPF1Q9H9Y2 349 aaKnown RBP11.48□□□□□ -0.57
AP003550.1-201ENST00000522416 RXFP1Q9HBX9 757 aa11.48□□□□□ -0.57
AP003550.1-201ENST00000522416 SLC38A7Q9NVC3 462 aa11.48□□□□□ -0.57
AP003550.1-201ENST00000522416 DZANK1Q9NVP4 752 aa11.48□□□□□ -0.57
AP003550.1-201ENST00000522416 PRKAG3Q9UGI9 489 aa11.48□□□□□ -0.57
AP003550.1-201ENST00000522416 SERTAD1Q9UHV2 236 aa11.48□□□□□ -0.57
AP003550.1-201ENST00000522416 RCOR1Q9UKL0 485 aa11.48□□□□□ -0.57
AP003550.1-201ENST00000522416 AGO2Q9UKV8 859 aaKnown RBP11.48□□□□□ -0.57
AP003550.1-201ENST00000522416 CFAP45Q9UL16 551 aa11.48□□□□□ -0.57
AP003550.1-201ENST00000522416 SSX2IPQ9Y2D8 614 aa11.48□□□□□ -0.57
AP003550.1-201ENST00000522416 TSC2P49815 1807 aa11.48□□□□□ -0.57
AP003550.1-201ENST00000522416 WDFY4Q6ZS81 3184 aa11.47□□□□□ -0.57
AP003550.1-201ENST00000522416 NOTCH4Q99466 2003 aa11.47□□□□□ -0.57
AP003550.1-201ENST00000522416 CCDC195A0A1B0GUA6 201 aa11.47□□□□□ -0.57
AP003550.1-201ENST00000522416 A0A1B0GVL5 298 aa11.47□□□□□ -0.57
AP003550.1-201ENST00000522416 LOC730098B7Z3J9 87 aa11.47□□□□□ -0.57
AP003550.1-201ENST00000522416 ADSSP30520 456 aa11.47□□□□□ -0.57
AP003550.1-201ENST00000522416 MCM4P33991 863 aa11.47□□□□□ -0.57
AP003550.1-201ENST00000522416 CDR1P51861 262 aa11.47□□□□□ -0.57
AP003550.1-201ENST00000522416 ARPP19P56211 112 aa11.47□□□□□ -0.57
AP003550.1-201ENST00000522416 L1TD1Q5T7N2 865 aaKnown RBP11.47□□□□□ -0.57
AP003550.1-201ENST00000522416 CCDC65Q8IXS2 484 aa11.47□□□□□ -0.57
AP003550.1-201ENST00000522416 SYCP3Q8IZU3 236 aa11.47□□□□□ -0.57
AP003550.1-201ENST00000522416 IQUBQ8NA54 791 aa11.47□□□□□ -0.57
AP003550.1-201ENST00000522416 ST13P5Q8NFI4 369 aaPredicted RBP11.47□□□□□ -0.57
AP003550.1-201ENST00000522416 SPATA32Q96LK8 384 aa11.47□□□□□ -0.57
AP003550.1-201ENST00000522416 UROC1Q96N76 676 aa11.47□□□□□ -0.57
AP003550.1-201ENST00000522416 ACCSQ96QU6 501 aa11.47□□□□□ -0.57
AP003550.1-201ENST00000522416 POP1Q99575 1024 aaKnown RBP11.47□□□□□ -0.57
AP003550.1-201ENST00000522416 FAM213AQ9BRX8 229 aa11.47□□□□□ -0.57
AP003550.1-201ENST00000522416 STRA6Q9BX79 667 aa11.47□□□□□ -0.57
AP003550.1-201ENST00000522416 TRIM9Q9C026 710 aa11.47□□□□□ -0.57
AP003550.1-201ENST00000522416 SFXN1Q9H9B4 322 aa11.47□□□□□ -0.57
AP003550.1-201ENST00000522416 KBTBD4Q9NVX7 518 aa11.47□□□□□ -0.57
AP003550.1-201ENST00000522416 FAM13BQ9NYF5 915 aa11.47□□□□□ -0.57
AP003550.1-201ENST00000522416 STK39Q9UEW8 545 aa11.47□□□□□ -0.57
AP003550.1-201ENST00000522416 CPSF3Q9UKF6 684 aaKnown RBP11.47□□□□□ -0.57
AP003550.1-201ENST00000522416 NUB1Q9Y5A7 615 aa11.47□□□□□ -0.57
AP003550.1-201ENST00000522416 TECTAO75443 2155 aa11.46□□□□□ -0.57
AP003550.1-201ENST00000522416 FRMD3A2A2Y4 597 aa11.46□□□□□ -0.57
AP003550.1-201ENST00000522416 C2CD4DB7Z1M9 353 aa11.46□□□□□ -0.57
AP003550.1-201ENST00000522416 PFKFB1P16118 471 aa11.46□□□□□ -0.57
AP003550.1-201ENST00000522416 FGFR3P22607 806 aa11.46□□□□□ -0.57
AP003550.1-201ENST00000522416 OR1D2P34982 312 aa11.46□□□□□ -0.57
AP003550.1-201ENST00000522416 WNT7BP56706 349 aa11.46□□□□□ -0.57
AP003550.1-201ENST00000522416 KRT85P78386 507 aa11.46□□□□□ -0.57
AP003550.1-201ENST00000522416 ITIH3Q06033 890 aa11.46□□□□□ -0.57
AP003550.1-201ENST00000522416 CUL4BQ13620 913 aa11.46□□□□□ -0.57
AP003550.1-201ENST00000522416 BECN1Q14457 450 aa11.46□□□□□ -0.57
AP003550.1-201ENST00000522416 ATAT1Q5SQI0 421 aa11.46□□□□□ -0.57
AP003550.1-201ENST00000522416 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.46□□□□□ -0.57
AP003550.1-201ENST00000522416 KREMEN2Q8NCW0 462 aa11.46□□□□□ -0.57
AP003550.1-201ENST00000522416 PIK3R5Q8WYR1 880 aa11.46□□□□□ -0.57
AP003550.1-201ENST00000522416 DDX27Q96GQ7 796 aaKnown RBP11.46□□□□□ -0.57
AP003550.1-201ENST00000522416 RIPOR3Q96MK2 946 aa11.46□□□□□ -0.57
AP003550.1-201ENST00000522416 CBWD1Q9BRT8 395 aa11.46□□□□□ -0.57
AP003550.1-201ENST00000522416 TNMDQ9H2S6 317 aa11.46□□□□□ -0.57
AP003550.1-201ENST00000522416 ST6GALNAC4Q9H4F1 302 aa11.46□□□□□ -0.57
AP003550.1-201ENST00000522416 C11orf16Q9NQ32 467 aa11.46□□□□□ -0.57
AP003550.1-201ENST00000522416 FNIP2Q9P278 1114 aa11.46□□□□□ -0.57
AP003550.1-201ENST00000522416 SEL1LQ9UBV2 794 aa11.46□□□□□ -0.57
AP003550.1-201ENST00000522416 KCNH3Q9ULD8 1083 aa11.46□□□□□ -0.57
AP003550.1-201ENST00000522416 TIMM13Q9Y5L4 95 aaPredicted RBP11.46□□□□□ -0.57
AP003550.1-201ENST00000522416 CDY1Q9Y6F8 540 aa11.46□□□□□ -0.57
AP003550.1-201ENST00000522416 PI4K2BG5E9Z4 385 aa11.45□□□□□ -0.58
AP003550.1-201ENST00000522416 TMEM189-UBE2V1I3L0A0 370 aa11.45□□□□□ -0.58
AP003550.1-201ENST00000522416 DCXO43602 365 aa11.45□□□□□ -0.58
AP003550.1-201ENST00000522416 PDIA4P13667 645 aaKnown RBP11.45□□□□□ -0.58
AP003550.1-201ENST00000522416 HOXD13P35453 343 aa11.45□□□□□ -0.58
AP003550.1-201ENST00000522416 MTHFRP42898 656 aa11.45□□□□□ -0.58
AP003550.1-201ENST00000522416 NTHL1P78549 312 aa11.45□□□□□ -0.58
AP003550.1-201ENST00000522416 ELAVL2Q12926 359 aaKnown RBP11.45□□□□□ -0.58
AP003550.1-201ENST00000522416 TMEM132DQ14C87 1099 aa11.45□□□□□ -0.58
AP003550.1-201ENST00000522416 VARS2Q5ST30 1063 aaKnown RBP11.45□□□□□ -0.58
AP003550.1-201ENST00000522416 SCARA3Q6AZY7 606 aa11.45□□□□□ -0.58
AP003550.1-201ENST00000522416 ATL3Q6DD88 541 aa11.45□□□□□ -0.58
AP003550.1-201ENST00000522416 LILRA6Q6PI73 481 aa11.45□□□□□ -0.58
AP003550.1-201ENST00000522416 CRELD2Q6UXH1 353 aaPredicted RBP11.45□□□□□ -0.58
AP003550.1-201ENST00000522416 GPR149Q86SP6 731 aa11.45□□□□□ -0.58
AP003550.1-201ENST00000522416 NELFCDQ8IXH7 590 aa11.45□□□□□ -0.58
AP003550.1-201ENST00000522416 SMG7Q92540 1137 aaKnown RBP11.45□□□□□ -0.58
AP003550.1-201ENST00000522416 KCNN1Q92952 543 aa11.45□□□□□ -0.58
AP003550.1-201ENST00000522416 C7orf25Q9BPX7 421 aa11.45□□□□□ -0.58
AP003550.1-201ENST00000522416 SMOC2Q9H3U7 446 aa11.45□□□□□ -0.58
AP003550.1-201ENST00000522416 PLEKHA5Q9HAU0 1116 aa11.45□□□□□ -0.58
AP003550.1-201ENST00000522416 OLFML3Q9NRN5 406 aa11.45□□□□□ -0.58
AP003550.1-201ENST00000522416 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.45□□□□□ -0.58
AP003550.1-201ENST00000522416 PCDHB13Q9Y5F0 798 aa11.45□□□□□ -0.58
AP003550.1-201ENST00000522416 CCL16O15467 120 aa11.44□□□□□ -0.58
AP003550.1-201ENST00000522416 TRAPPC3O43617 180 aa11.44□□□□□ -0.58
AP003550.1-201ENST00000522416 ACTN4O43707 911 aaKnown RBP11.44□□□□□ -0.58
AP003550.1-201ENST00000522416 ASGR2P07307 311 aa11.44□□□□□ -0.58
AP003550.1-201ENST00000522416 RPL9P32969 192 aaKnown RBP11.44□□□□□ -0.58
AP003550.1-201ENST00000522416 NDUFA8P51970 172 aa11.44□□□□□ -0.58
AP003550.1-201ENST00000522416 AMPD3Q01432 767 aa11.44□□□□□ -0.58
AP003550.1-201ENST00000522416 CREMQ03060 361 aa11.44□□□□□ -0.58
AP003550.1-201ENST00000522416 ZBTB6Q15916 424 aa11.44□□□□□ -0.58
AP003550.1-201ENST00000522416 SLFN12LQ6IEE8 588 aa11.44□□□□□ -0.58
AP003550.1-201ENST00000522416 EFCAB13Q8IY85 973 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms