RNA–Protein interactions for RNA: ENST00000521941.1

CTNNA1-231, Transcript of catenin alpha 1, human

TSL 3

Gene CTNNA1, Length 224 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-231	ENST00000521941	KMT5B	Q4FZB7	885 aa		9.09	□□□□□ -0.95
CTNNA1-231	ENST00000521941	RARS2	Q5T160	578 aa	Known RBP	9.09	□□□□□ -0.95
CTNNA1-231	ENST00000521941	ANKRD54	Q6NXT1	300 aa		9.09	□□□□□ -0.95
CTNNA1-231	ENST00000521941	KANK3	Q6NY19	840 aa		9.09	□□□□□ -0.95
CTNNA1-231	ENST00000521941	DCLRE1A	Q6PJP8	1040 aa		9.09	□□□□□ -0.95
CTNNA1-231	ENST00000521941	ALKAL1	Q6UXT8	129 aa		9.09	□□□□□ -0.95
CTNNA1-231	ENST00000521941	KRBA2	Q6ZNG9	492 aa		9.09	□□□□□ -0.95
CTNNA1-231	ENST00000521941	PALB2	Q86YC2	1186 aa		9.09	□□□□□ -0.95
CTNNA1-231	ENST00000521941	RNF168	Q8IYW5	571 aa	Predicted RBP	9.09	□□□□□ -0.95
CTNNA1-231	ENST00000521941	C12orf76	Q8N812	135 aa	Predicted RBP	9.09	□□□□□ -0.95
CTNNA1-231	ENST00000521941	BEST2	Q8NFU1	509 aa		9.09	□□□□□ -0.95
CTNNA1-231	ENST00000521941	MSLNL	Q96KJ4	702 aa		9.09	□□□□□ -0.95
CTNNA1-231	ENST00000521941	TTPAL	Q9BTX7	342 aa		9.09	□□□□□ -0.95
CTNNA1-231	ENST00000521941	TMEM206	Q9H813	350 aa		9.09	□□□□□ -0.95
CTNNA1-231	ENST00000521941	STK39	Q9UEW8	545 aa		9.09	□□□□□ -0.95
CTNNA1-231	ENST00000521941	USP25	Q9UHP3	1055 aa		9.09	□□□□□ -0.95
CTNNA1-231	ENST00000521941	CPSF3	Q9UKF6	684 aa	Known RBP	9.09	□□□□□ -0.95
CTNNA1-231	ENST00000521941	UBQLN1	Q9UMX0	589 aa	Known RBP	9.09	□□□□□ -0.95
CTNNA1-231	ENST00000521941	FAM50B	Q9Y247	325 aa		9.09	□□□□□ -0.95
CTNNA1-231	ENST00000521941	SSX2IP	Q9Y2D8	614 aa		9.09	□□□□□ -0.95
CTNNA1-231	ENST00000521941	USP15	Q9Y4E8	981 aa	Predicted RBP	9.09	□□□□□ -0.95
CTNNA1-231	ENST00000521941	VCAN	P13611	3396 aa		9.09	□□□□□ -0.95
CTNNA1-231	ENST00000521941	PVALEF	A0A1B0GWK0	134 aa		9.08	□□□□□ -0.96
CTNNA1-231	ENST00000521941	TMEM189-UBE2V1	I3L0A0	370 aa		9.08	□□□□□ -0.96
CTNNA1-231	ENST00000521941	PPEF2	O14830	753 aa		9.08	□□□□□ -0.96
CTNNA1-231	ENST00000521941	EIF3D	O15371	548 aa	Known RBP eCLIP	9.08	□□□□□ -0.96
CTNNA1-231	ENST00000521941	XPOT	O43592	962 aa	Known RBP	9.08	□□□□□ -0.96
CTNNA1-231	ENST00000521941	KLRC4	O43908	158 aa		9.08	□□□□□ -0.96
CTNNA1-231	ENST00000521941	ZNF202	O95125	648 aa		9.08	□□□□□ -0.96
CTNNA1-231	ENST00000521941	GLUD1	P00367	558 aa		9.08	□□□□□ -0.96
CTNNA1-231	ENST00000521941	RPN1	P04843	607 aa	Known RBP	9.08	□□□□□ -0.96
CTNNA1-231	ENST00000521941	ADH1A	P07327	375 aa		9.08	□□□□□ -0.96
CTNNA1-231	ENST00000521941	SPATA31D3	P0C874	917 aa		9.08	□□□□□ -0.96
CTNNA1-231	ENST00000521941	SSTR3	P32745	418 aa	Predicted RBP	9.08	□□□□□ -0.96
CTNNA1-231	ENST00000521941	CLCN4	P51793	760 aa		9.08	□□□□□ -0.96
CTNNA1-231	ENST00000521941	WNT7B	P56706	349 aa		9.08	□□□□□ -0.96
CTNNA1-231	ENST00000521941	KIAA0319	Q5VV43	1072 aa		9.08	□□□□□ -0.96
CTNNA1-231	ENST00000521941	LMBRD2	Q68DH5	695 aa	Predicted RBP	9.08	□□□□□ -0.96
CTNNA1-231	ENST00000521941	CNNM4	Q6P4Q7	775 aa		9.08	□□□□□ -0.96
CTNNA1-231	ENST00000521941	SYCE2	Q6PIF2	218 aa		9.08	□□□□□ -0.96
CTNNA1-231	ENST00000521941	CRELD2	Q6UXH1	353 aa	Predicted RBP	9.08	□□□□□ -0.96
CTNNA1-231	ENST00000521941	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	9.08	□□□□□ -0.96
CTNNA1-231	ENST00000521941	SPATA31D4	Q6ZUB0	917 aa		9.08	□□□□□ -0.96
CTNNA1-231	ENST00000521941	PPFIBP1	Q86W92	1011 aa		9.08	□□□□□ -0.96
CTNNA1-231	ENST00000521941	BRSK2	Q8IWQ3	736 aa		9.08	□□□□□ -0.96
CTNNA1-231	ENST00000521941	EFCAB13	Q8IY85	973 aa		9.08	□□□□□ -0.96
CTNNA1-231	ENST00000521941	SMRP1	Q8NCR6	262 aa		9.08	□□□□□ -0.96
CTNNA1-231	ENST00000521941	CCDC47	Q96A33	483 aa	Known RBP	9.08	□□□□□ -0.96
CTNNA1-231	ENST00000521941	DDX27	Q96GQ7	796 aa	Known RBP	9.08	□□□□□ -0.96
CTNNA1-231	ENST00000521941	FAM84A	Q96KN4	292 aa		9.08	□□□□□ -0.96
CTNNA1-231	ENST00000521941	PLEKHA5	Q9HAU0	1116 aa		9.08	□□□□□ -0.96
CTNNA1-231	ENST00000521941	MAN1C1	Q9NR34	630 aa		9.08	□□□□□ -0.96
CTNNA1-231	ENST00000521941	CHST7	Q9NS84	486 aa		9.08	□□□□□ -0.96
CTNNA1-231	ENST00000521941	RBAK	Q9NYW8	714 aa	Predicted RBP	9.08	□□□□□ -0.96
CTNNA1-231	ENST00000521941	CIZ1	Q9ULV3	898 aa	Predicted RBP	9.08	□□□□□ -0.96
CTNNA1-231	ENST00000521941	IRAK3	Q9Y616	596 aa		9.08	□□□□□ -0.96
CTNNA1-231	ENST00000521941	STYXL1	Q9Y6J8	313 aa		9.08	□□□□□ -0.96
CTNNA1-231	ENST00000521941	C2orf16	Q68DN1	1984 aa		9.08	□□□□□ -0.96
CTNNA1-231	ENST00000521941	UBE4B	O95155	1302 aa		9.07	□□□□□ -0.96
CTNNA1-231	ENST00000521941	FAM237A	A0A1B0GTK4	181 aa		9.07	□□□□□ -0.96
CTNNA1-231	ENST00000521941	TRAPPC3	O43617	180 aa		9.07	□□□□□ -0.96
CTNNA1-231	ENST00000521941	LILRB3	O75022	631 aa		9.07	□□□□□ -0.96
CTNNA1-231	ENST00000521941	EFEMP2	O95967	443 aa		9.07	□□□□□ -0.96
CTNNA1-231	ENST00000521941	LDHA	P00338	332 aa	Known RBP	9.07	□□□□□ -0.96
CTNNA1-231	ENST00000521941	GART	P22102	1010 aa		9.07	□□□□□ -0.96
CTNNA1-231	ENST00000521941	RPL9	P32969	192 aa	Known RBP	9.07	□□□□□ -0.96
CTNNA1-231	ENST00000521941	HOXD13	P35453	343 aa		9.07	□□□□□ -0.96
CTNNA1-231	ENST00000521941	ARPP19	P56211	112 aa		9.07	□□□□□ -0.96
CTNNA1-231	ENST00000521941	TFAM	Q00059	246 aa	Known RBP	9.07	□□□□□ -0.96
CTNNA1-231	ENST00000521941	CREM	Q03060	361 aa		9.07	□□□□□ -0.96
CTNNA1-231	ENST00000521941	EHHADH	Q08426	723 aa		9.07	□□□□□ -0.96
CTNNA1-231	ENST00000521941	STK4	Q13043	487 aa		9.07	□□□□□ -0.96
CTNNA1-231	ENST00000521941	PNOC	Q13519	176 aa		9.07	□□□□□ -0.96
CTNNA1-231	ENST00000521941	KCNC3	Q14003	757 aa		9.07	□□□□□ -0.96
CTNNA1-231	ENST00000521941	PUS10	Q3MIT2	529 aa	Known RBP	9.07	□□□□□ -0.96
CTNNA1-231	ENST00000521941	CD300LG	Q6UXG3	332 aa		9.07	□□□□□ -0.96
CTNNA1-231	ENST00000521941	TMC5	Q6UXY8	1006 aa		9.07	□□□□□ -0.96
CTNNA1-231	ENST00000521941	DSTYK	Q6XUX3	929 aa		9.07	□□□□□ -0.96
CTNNA1-231	ENST00000521941	EPM2AIP1	Q7L775	607 aa	Predicted RBP	9.07	□□□□□ -0.96
CTNNA1-231	ENST00000521941	HS2ST1	Q7LGA3	356 aa		9.07	□□□□□ -0.96
CTNNA1-231	ENST00000521941	CD302	Q8IX05	232 aa		9.07	□□□□□ -0.96
CTNNA1-231	ENST00000521941	GPD1L	Q8N335	351 aa		9.07	□□□□□ -0.96
CTNNA1-231	ENST00000521941	RDH13	Q8NBN7	331 aa		9.07	□□□□□ -0.96
CTNNA1-231	ENST00000521941	KIAA0895	Q8NCT3	520 aa		9.07	□□□□□ -0.96
CTNNA1-231	ENST00000521941	FEZF2	Q8TBJ5	459 aa		9.07	□□□□□ -0.96
CTNNA1-231	ENST00000521941	ZNF507	Q8TCN5	953 aa		9.07	□□□□□ -0.96
CTNNA1-231	ENST00000521941	SLC22A17	Q8WUG5	538 aa		9.07	□□□□□ -0.96
CTNNA1-231	ENST00000521941	SCFD1	Q8WVM8	642 aa		9.07	□□□□□ -0.96
CTNNA1-231	ENST00000521941	PIK3R5	Q8WYR1	880 aa		9.07	□□□□□ -0.96
CTNNA1-231	ENST00000521941	ERCC4	Q92889	916 aa	Predicted RBP	9.07	□□□□□ -0.96
CTNNA1-231	ENST00000521941	FBXL18	Q96ME1	805 aa		9.07	□□□□□ -0.96
CTNNA1-231	ENST00000521941	TSHZ2	Q9NRE2	1034 aa		9.07	□□□□□ -0.96
CTNNA1-231	ENST00000521941	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	9.07	□□□□□ -0.96
CTNNA1-231	ENST00000521941	AGPAT3	Q9NRZ7	376 aa		9.07	□□□□□ -0.96
CTNNA1-231	ENST00000521941	DZANK1	Q9NVP4	752 aa		9.07	□□□□□ -0.96
CTNNA1-231	ENST00000521941	HSPBP1	Q9NZL4	362 aa		9.07	□□□□□ -0.96
CTNNA1-231	ENST00000521941	CHMP5	Q9NZZ3	219 aa		9.07	□□□□□ -0.96
CTNNA1-231	ENST00000521941	TIMM13	Q9Y5L4	95 aa	Predicted RBP	9.07	□□□□□ -0.96
CTNNA1-231	ENST00000521941	TSC2	P49815	1807 aa		9.07	□□□□□ -0.96
CTNNA1-231	ENST00000521941	SCN1A	P35498	2009 aa		9.07	□□□□□ -0.96

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