RNA–Protein interactions for RNA: ENST00000521798.1

SPIDR-215, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 647 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-215ENST00000521798 FAM89AQ96GI7 184 aa8.38□□□□□ -1.07
SPIDR-215ENST00000521798 FOXB1Q99853 325 aa8.38□□□□□ -1.07
SPIDR-215ENST00000521798 STOML1Q9UBI4 398 aa8.38□□□□□ -1.07
SPIDR-215ENST00000521798 PRSS50Q9UI38 385 aa8.38□□□□□ -1.07
SPIDR-215ENST00000521798 PCDHB4Q9Y5E5 795 aa8.38□□□□□ -1.07
SPIDR-215ENST00000521798 CDY2AQ9Y6F7 541 aa8.38□□□□□ -1.07
SPIDR-215ENST00000521798 ARFGEF1Q9Y6D6 1849 aa8.38□□□□□ -1.07
SPIDR-215ENST00000521798 CACNA1FO60840 1977 aa8.37□□□□□ -1.07
SPIDR-215ENST00000521798 ZBED9Q6R2W3 1325 aa8.37□□□□□ -1.07
SPIDR-215ENST00000521798 CNTNAP5Q8WYK1 1306 aa8.37□□□□□ -1.07
SPIDR-215ENST00000521798 TMEM265A0A087WTH1 108 aa8.37□□□□□ -1.07
SPIDR-215ENST00000521798 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.37□□□□□ -1.07
SPIDR-215ENST00000521798 ACOT7O00154 380 aa8.37□□□□□ -1.07
SPIDR-215ENST00000521798 KPNA5O15131 536 aa8.37□□□□□ -1.07
SPIDR-215ENST00000521798 FRS3O43559 492 aa8.37□□□□□ -1.07
SPIDR-215ENST00000521798 MYF5P13349 255 aa8.37□□□□□ -1.07
SPIDR-215ENST00000521798 CCT2P78371 535 aaKnown RBP8.37□□□□□ -1.07
SPIDR-215ENST00000521798 GPSM2P81274 684 aa8.37□□□□□ -1.07
SPIDR-215ENST00000521798 ADCY2Q08462 1091 aa8.37□□□□□ -1.07
SPIDR-215ENST00000521798 SIM2Q14190 667 aaPredicted RBP8.37□□□□□ -1.07
SPIDR-215ENST00000521798 ADRM1Q16186 407 aa8.37□□□□□ -1.07
SPIDR-215ENST00000521798 PRAMEF9Q5VWM5 478 aa8.37□□□□□ -1.07
SPIDR-215ENST00000521798 ZNF787Q6DD87 383 aa8.37□□□□□ -1.07
SPIDR-215ENST00000521798 KLHDC10Q6PID8 442 aa8.37□□□□□ -1.07
SPIDR-215ENST00000521798 APOA5Q6Q788 366 aa8.37□□□□□ -1.07
SPIDR-215ENST00000521798 CCDC191Q8NCU4 936 aa8.37□□□□□ -1.07
SPIDR-215ENST00000521798 TTLL11Q8NHH1 800 aa8.37□□□□□ -1.07
SPIDR-215ENST00000521798 DNAAF4Q8WXU2 420 aa8.37□□□□□ -1.07
SPIDR-215ENST00000521798 SEC14L1Q92503 715 aa8.37□□□□□ -1.07
SPIDR-215ENST00000521798 FATE1Q969F0 183 aa8.37□□□□□ -1.07
SPIDR-215ENST00000521798 KIAA1191Q96A73 305 aa8.37□□□□□ -1.07
SPIDR-215ENST00000521798 C22orf23Q9BZE7 217 aa8.37□□□□□ -1.07
SPIDR-215ENST00000521798 CERS4Q9HA82 394 aa8.37□□□□□ -1.07
SPIDR-215ENST00000521798 AGO4Q9HCK5 861 aaKnown RBP8.37□□□□□ -1.07
SPIDR-215ENST00000521798 IMPACTQ9P2X3 320 aa8.37□□□□□ -1.07
SPIDR-215ENST00000521798 CFAP20Q9Y6A4 193 aaKnown RBP8.37□□□□□ -1.07
SPIDR-215ENST00000521798 SCINQ9Y6U3 715 aa8.37□□□□□ -1.07
SPIDR-215ENST00000521798 SLX4Q8IY92 1834 aa8.36□□□□□ -1.07
SPIDR-215ENST00000521798 A0A088AWK7 358 aa8.36□□□□□ -1.07
SPIDR-215ENST00000521798 PRRT4C9JH25 899 aa8.36□□□□□ -1.07
SPIDR-215ENST00000521798 PCCAP05165 728 aaPredicted RBP8.36□□□□□ -1.07
SPIDR-215ENST00000521798 ABCB4P21439 1286 aa8.36□□□□□ -1.07
SPIDR-215ENST00000521798 YY1P25490 414 aa8.36□□□□□ -1.07
SPIDR-215ENST00000521798 AOAHP28039 575 aa8.36□□□□□ -1.07
SPIDR-215ENST00000521798 HOXA10P31260 410 aaPredicted RBP8.36□□□□□ -1.07
SPIDR-215ENST00000521798 SLC6A3Q01959 620 aa8.36□□□□□ -1.07
SPIDR-215ENST00000521798 ROM1Q03395 351 aa8.36□□□□□ -1.07
SPIDR-215ENST00000521798 IZUMO3Q5VZ72 239 aa8.36□□□□□ -1.07
SPIDR-215ENST00000521798 RNF43Q68DV7 783 aa8.36□□□□□ -1.07
SPIDR-215ENST00000521798 SLFN12LQ6IEE8 588 aa8.36□□□□□ -1.07
SPIDR-215ENST00000521798 UNQ6494/PRO21346Q6UXR6 183 aa8.36□□□□□ -1.07
SPIDR-215ENST00000521798 SYDE1Q6ZW31 735 aaPredicted RBP8.36□□□□□ -1.07
SPIDR-215ENST00000521798 DCP2Q8IU60 420 aaKnown RBP8.36□□□□□ -1.07
SPIDR-215ENST00000521798 PLD6Q8N2A8 252 aaKnown RBP8.36□□□□□ -1.07
SPIDR-215ENST00000521798 OXR1Q8N573 874 aa8.36□□□□□ -1.07
SPIDR-215ENST00000521798 NETO1Q8TDF5 533 aa8.36□□□□□ -1.07
SPIDR-215ENST00000521798 HDAC10Q969S8 669 aa8.36□□□□□ -1.07
SPIDR-215ENST00000521798 APIPQ96GX9 242 aa8.36□□□□□ -1.07
SPIDR-215ENST00000521798 CDK5RAP3Q96JB5 506 aa8.36□□□□□ -1.07
SPIDR-215ENST00000521798 PTPN18Q99952 460 aa8.36□□□□□ -1.07
SPIDR-215ENST00000521798 STARD7Q9NQZ5 370 aa8.36□□□□□ -1.07
SPIDR-215ENST00000521798 CWC25Q9NXE8 425 aaPredicted RBP8.36□□□□□ -1.07
SPIDR-215ENST00000521798 CDC23Q9UJX2 597 aa8.36□□□□□ -1.07
SPIDR-215ENST00000521798 PADI4Q9UM07 663 aa8.36□□□□□ -1.07
SPIDR-215ENST00000521798 CORO2BQ9UQ03 480 aa8.36□□□□□ -1.07
SPIDR-215ENST00000521798 NR2E3Q9Y5X4 410 aa8.36□□□□□ -1.07
SPIDR-215ENST00000521798 MYPNQ86TC9 1320 aa8.35□□□□□ -1.07
SPIDR-215ENST00000521798 CHD4Q14839 1912 aa8.35□□□□□ -1.07
SPIDR-215ENST00000521798 TCRBV5S2A0A599 114 aa8.35□□□□□ -1.07
SPIDR-215ENST00000521798 LRRC10BA6NIK2 292 aa8.35□□□□□ -1.07
SPIDR-215ENST00000521798 FOXN3O00409 490 aaPredicted RBP8.35□□□□□ -1.07
SPIDR-215ENST00000521798 NCK2O43639 380 aa8.35□□□□□ -1.07
SPIDR-215ENST00000521798 USP2O75604 605 aaPredicted RBP8.35□□□□□ -1.07
SPIDR-215ENST00000521798 FTLP02792 175 aaPredicted RBP8.35□□□□□ -1.07
SPIDR-215ENST00000521798 MSL3P1P0C860 447 aa8.35□□□□□ -1.07
SPIDR-215ENST00000521798 RPL17P18621 184 aaKnown RBP8.35□□□□□ -1.07
SPIDR-215ENST00000521798 TACR1P25103 407 aa8.35□□□□□ -1.07
SPIDR-215ENST00000521798 ALDH1B1P30837 517 aa8.35□□□□□ -1.07
SPIDR-215ENST00000521798 PRELPP51888 382 aa8.35□□□□□ -1.07
SPIDR-215ENST00000521798 MAP2K6P52564 334 aa8.35□□□□□ -1.07
SPIDR-215ENST00000521798 RTP1P59025 263 aa8.35□□□□□ -1.07
SPIDR-215ENST00000521798 RAB1AP62820 205 aa8.35□□□□□ -1.07
SPIDR-215ENST00000521798 RASSF7Q02833 373 aa8.35□□□□□ -1.07
SPIDR-215ENST00000521798 PPARAQ07869 468 aa8.35□□□□□ -1.07
SPIDR-215ENST00000521798 NEXNQ0ZGT2 675 aa8.35□□□□□ -1.07
SPIDR-215ENST00000521798 CPSF6Q16630 551 aaKnown RBP eCLIP8.35□□□□□ -1.07
SPIDR-215ENST00000521798 ALDH1L2Q3SY69 923 aa8.35□□□□□ -1.07
SPIDR-215ENST00000521798 BEND3Q5T5X7 828 aa8.35□□□□□ -1.07
SPIDR-215ENST00000521798 LVRNQ6Q4G3 990 aa8.35□□□□□ -1.07
SPIDR-215ENST00000521798 OLFM4Q6UX06 510 aa8.35□□□□□ -1.07
SPIDR-215ENST00000521798 SLC51AQ86UW1 340 aa8.35□□□□□ -1.07
SPIDR-215ENST00000521798 LINS1Q8NG48 757 aa8.35□□□□□ -1.07
SPIDR-215ENST00000521798 RGMAQ96B86 450 aa8.35□□□□□ -1.07
SPIDR-215ENST00000521798 CDC5LQ99459 802 aaKnown RBP8.35□□□□□ -1.07
SPIDR-215ENST00000521798 LRRC27Q9C0I9 530 aa8.35□□□□□ -1.07
SPIDR-215ENST00000521798 TMX4Q9H1E5 349 aaPredicted RBP8.35□□□□□ -1.07
SPIDR-215ENST00000521798 LRRC4CQ9HCJ2 640 aa8.35□□□□□ -1.07
SPIDR-215ENST00000521798 BTBD7Q9P203 1132 aa8.35□□□□□ -1.07
SPIDR-215ENST00000521798 EBF1Q9UH73 591 aa8.35□□□□□ -1.07
SPIDR-215ENST00000521798 SCOCQ9UIL1 159 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms