RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 ATF7IP2Q5U623 682 aa12.12□□□□□ -0.47
CLK4-206ENST00000520878 DNAJC24Q6P3W2 148 aa12.12□□□□□ -0.47
CLK4-206ENST00000520878 ENOSF1Q7L5Y1 443 aa12.12□□□□□ -0.47
CLK4-206ENST00000520878 SCFD2Q8WU76 684 aa12.12□□□□□ -0.47
CLK4-206ENST00000520878 AFG1LQ8WV93 481 aa12.12□□□□□ -0.47
CLK4-206ENST00000520878 MFSD14AQ96MC6 490 aa12.12□□□□□ -0.47
CLK4-206ENST00000520878 ZSWIM1Q9BR11 485 aa12.12□□□□□ -0.47
CLK4-206ENST00000520878 JPH2Q9BR39 696 aaPredicted RBP12.12□□□□□ -0.47
CLK4-206ENST00000520878 TSPYL1Q9H0U9 437 aa12.12□□□□□ -0.47
CLK4-206ENST00000520878 ST6GALNAC4Q9H4F1 302 aa12.12□□□□□ -0.47
CLK4-206ENST00000520878 PNMA3Q9UL41 463 aa12.12□□□□□ -0.47
CLK4-206ENST00000520878 UMODL1Q5DID0 1318 aa12.12□□□□□ -0.47
CLK4-206ENST00000520878 TTLL13PA6NNM8 815 aa12.12□□□□□ -0.47
CLK4-206ENST00000520878 TOM1L1O75674 476 aa12.12□□□□□ -0.47
CLK4-206ENST00000520878 GZMAP12544 262 aa12.12□□□□□ -0.47
CLK4-206ENST00000520878 MXD4Q14582 209 aaPredicted RBP12.12□□□□□ -0.47
CLK4-206ENST00000520878 GPRC5AQ8NFJ5 357 aa12.12□□□□□ -0.47
CLK4-206ENST00000520878 CPB2Q96IY4 423 aa12.12□□□□□ -0.47
CLK4-206ENST00000520878 NTPCRQ9BSD7 190 aaKnown RBP12.12□□□□□ -0.47
CLK4-206ENST00000520878 RBPJLQ9UBG7 517 aa12.12□□□□□ -0.47
CLK4-206ENST00000520878 TGFB3P10600 412 aa12.11□□□□□ -0.47
CLK4-206ENST00000520878 INSRRP14616 1297 aa12.11□□□□□ -0.47
CLK4-206ENST00000520878 CHRNB2P17787 502 aa12.11□□□□□ -0.47
CLK4-206ENST00000520878 FGFR4P22455 802 aa12.11□□□□□ -0.47
CLK4-206ENST00000520878 ZNF667Q5HYK9 610 aa12.11□□□□□ -0.47
CLK4-206ENST00000520878 DENND2CQ68D51 928 aa12.11□□□□□ -0.47
CLK4-206ENST00000520878 DPY19L2P1Q6NXN4 242 aa12.11□□□□□ -0.47
CLK4-206ENST00000520878 TAS1R3Q7RTX0 852 aa12.11□□□□□ -0.47
CLK4-206ENST00000520878 DYDC1Q8WWB3 177 aa12.11□□□□□ -0.47
CLK4-206ENST00000520878 WNT8AQ9H1J5 351 aa12.11□□□□□ -0.47
CLK4-206ENST00000520878 DHX33Q9H6R0 707 aaKnown RBP12.11□□□□□ -0.47
CLK4-206ENST00000520878 NOVA2Q9UNW9 492 aaKnown RBP12.11□□□□□ -0.47
CLK4-206ENST00000520878 NUB1Q9Y5A7 615 aa12.11□□□□□ -0.47
CLK4-206ENST00000520878 MAFBQ9Y5Q3 323 aaPredicted RBP12.11□□□□□ -0.47
CLK4-206ENST00000520878 A0A087WZ62 844 aa12.11□□□□□ -0.47
CLK4-206ENST00000520878 CST3P01034 146 aaPredicted RBP12.11□□□□□ -0.47
CLK4-206ENST00000520878 ABCD1P33897 745 aa12.11□□□□□ -0.47
CLK4-206ENST00000520878 RAP1GAPP47736 663 aa12.11□□□□□ -0.47
CLK4-206ENST00000520878 ERICH1Q86X53 443 aa12.11□□□□□ -0.47
CLK4-206ENST00000520878 HES6Q96HZ4 224 aa12.11□□□□□ -0.47
CLK4-206ENST00000520878 FDXACB1Q9BRP7 624 aaPredicted RBP12.11□□□□□ -0.47
CLK4-206ENST00000520878 ISCUQ9H1K1 167 aa12.11□□□□□ -0.47
CLK4-206ENST00000520878 SLITRK6Q9H5Y7 841 aa12.11□□□□□ -0.47
CLK4-206ENST00000520878 ZNF148Q9UQR1 794 aa12.11□□□□□ -0.47
CLK4-206ENST00000520878 ATP2C2O75185 946 aa12.11□□□□□ -0.47
CLK4-206ENST00000520878 ECEL1O95672 775 aa12.11□□□□□ -0.47
CLK4-206ENST00000520878 CXCL8P10145 99 aa12.11□□□□□ -0.47
CLK4-206ENST00000520878 CDH8P55286 799 aa12.11□□□□□ -0.47
CLK4-206ENST00000520878 WNT7BP56706 349 aa12.11□□□□□ -0.47
CLK4-206ENST00000520878 PSMD6Q15008 389 aa12.11□□□□□ -0.47
CLK4-206ENST00000520878 ZACNQ401N2 412 aa12.11□□□□□ -0.47
CLK4-206ENST00000520878 CYP4A22Q5TCH4 519 aa12.11□□□□□ -0.47
CLK4-206ENST00000520878 ARMCX2Q7L311 632 aa12.11□□□□□ -0.47
CLK4-206ENST00000520878 JAMLQ86YT9 394 aa12.11□□□□□ -0.47
CLK4-206ENST00000520878 C1orf131Q8NDD1 294 aaKnown RBP12.11□□□□□ -0.47
CLK4-206ENST00000520878 ATP8B4Q8TF62 1192 aa12.11□□□□□ -0.47
CLK4-206ENST00000520878 PKNOX2Q96KN3 472 aa12.11□□□□□ -0.47
CLK4-206ENST00000520878 CALR3Q96L12 384 aaKnown RBP12.11□□□□□ -0.47
CLK4-206ENST00000520878 ADPGKQ9BRR6 497 aa12.11□□□□□ -0.47
CLK4-206ENST00000520878 MRPL47Q9HD33 250 aaKnown RBP12.11□□□□□ -0.47
CLK4-206ENST00000520878 ERVK-5Q9HDB9 667 aa12.11□□□□□ -0.47
CLK4-206ENST00000520878 OGTO15294 1046 aa12.1□□□□□ -0.47
CLK4-206ENST00000520878 DYNC1LI2O43237 492 aaPredicted RBP12.1□□□□□ -0.47
CLK4-206ENST00000520878 GAS8O95995 478 aa12.1□□□□□ -0.47
CLK4-206ENST00000520878 ADCYAP1R1P41586 468 aa12.1□□□□□ -0.47
CLK4-206ENST00000520878 CCT5P48643 541 aa12.1□□□□□ -0.47
CLK4-206ENST00000520878 ADCY1Q08828 1119 aa12.1□□□□□ -0.47
CLK4-206ENST00000520878 RNF187Q5TA31 235 aaPredicted RBP12.1□□□□□ -0.47
CLK4-206ENST00000520878 HEXIM2Q96MH2 286 aaKnown RBP12.1□□□□□ -0.47
CLK4-206ENST00000520878 ZWILCHQ9H900 591 aa12.1□□□□□ -0.47
CLK4-206ENST00000520878 ERAP1Q9NZ08 941 aa12.1□□□□□ -0.47
CLK4-206ENST00000520878 UVRAGQ9P2Y5 699 aa12.1□□□□□ -0.47
CLK4-206ENST00000520878 SIPA1L1O43166 1804 aa12.1□□□□□ -0.47
CLK4-206ENST00000520878 MYPNQ86TC9 1320 aa12.1□□□□□ -0.47
CLK4-206ENST00000520878 LRRD1A4D1F6 860 aa12.1□□□□□ -0.47
CLK4-206ENST00000520878 ASB14A6NK59 587 aa12.1□□□□□ -0.47
CLK4-206ENST00000520878 BTNL10A8MVZ5 291 aa12.1□□□□□ -0.47
CLK4-206ENST00000520878 ATP2A1O14983 1001 aa12.1□□□□□ -0.47
CLK4-206ENST00000520878 TBXAS1P24557 533 aaPredicted RBP12.1□□□□□ -0.47
CLK4-206ENST00000520878 PPP2R5EQ16537 467 aa12.1□□□□□ -0.47
CLK4-206ENST00000520878 CLEC16AQ2KHT3 1053 aa12.1□□□□□ -0.47
CLK4-206ENST00000520878 CELF3Q5SZQ8 465 aaKnown RBP12.1□□□□□ -0.47
CLK4-206ENST00000520878 EEF1DP3Q658K8 133 aa12.1□□□□□ -0.47
CLK4-206ENST00000520878 RUFY4Q6ZNE9 571 aa12.1□□□□□ -0.47
CLK4-206ENST00000520878 C7orf31Q8N865 590 aa12.1□□□□□ -0.47
CLK4-206ENST00000520878 FAM53CQ9NYF3 392 aa12.1□□□□□ -0.47
CLK4-206ENST00000520878 PASKQ96RG2 1323 aa12.1□□□□□ -0.47
CLK4-206ENST00000520878 PDHXO00330 501 aa12.1□□□□□ -0.47
CLK4-206ENST00000520878 HBP1O60381 514 aa12.1□□□□□ -0.47
CLK4-206ENST00000520878 ACSL3O95573 720 aa12.1□□□□□ -0.47
CLK4-206ENST00000520878 ADORA2AP29274 412 aa12.1□□□□□ -0.47
CLK4-206ENST00000520878 HSD17B3P37058 310 aa12.1□□□□□ -0.47
CLK4-206ENST00000520878 PHKA2P46019 1235 aa12.1□□□□□ -0.47
CLK4-206ENST00000520878 GUCY1A3Q02108 690 aa12.1□□□□□ -0.47
CLK4-206ENST00000520878 HP1BP3Q5SSJ5 553 aaPredicted RBP12.1□□□□□ -0.47
CLK4-206ENST00000520878 GPAT2Q6NUI2 795 aa12.1□□□□□ -0.47
CLK4-206ENST00000520878 SCYL2Q6P3W7 929 aa12.1□□□□□ -0.47
CLK4-206ENST00000520878 C10orf67Q8IYJ2 551 aa12.1□□□□□ -0.47
CLK4-206ENST00000520878 TMEM35BQ8NCS4 154 aa12.1□□□□□ -0.47
CLK4-206ENST00000520878 C2orf40Q9H1Z8 148 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms