RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 ZNF516Q92618 1163 aa9.65□□□□□ -0.86
CSMD1-208ENST00000520561 LPPQ93052 612 aa9.65□□□□□ -0.86
CSMD1-208ENST00000520561 TRIM43Q96BQ3 446 aaPredicted RBP9.65□□□□□ -0.86
CSMD1-208ENST00000520561 FAM84AQ96KN4 292 aa9.65□□□□□ -0.86
CSMD1-208ENST00000520561 ZNF560Q96MR9 790 aa9.65□□□□□ -0.86
CSMD1-208ENST00000520561 SPAG5Q96R06 1193 aa9.65□□□□□ -0.86
CSMD1-208ENST00000520561 GAD1Q99259 594 aa9.65□□□□□ -0.86
CSMD1-208ENST00000520561 TTYH3Q9C0H2 523 aa9.65□□□□□ -0.86
CSMD1-208ENST00000520561 NUCKS1Q9H1E3 243 aaKnown RBP9.65□□□□□ -0.86
CSMD1-208ENST00000520561 ELAC1Q9H777 363 aaKnown RBP9.65□□□□□ -0.86
CSMD1-208ENST00000520561 NLRC4Q9NPP4 1024 aa9.65□□□□□ -0.86
CSMD1-208ENST00000520561 SLC38A7Q9NVC3 462 aa9.65□□□□□ -0.86
CSMD1-208ENST00000520561 TMEM161AQ9NX61 479 aa9.65□□□□□ -0.86
CSMD1-208ENST00000520561 CAPN11Q9UMQ6 739 aa9.65□□□□□ -0.86
CSMD1-208ENST00000520561 LUC7L2Q9Y383 392 aaKnown RBP9.65□□□□□ -0.86
CSMD1-208ENST00000520561 FHOD1Q9Y613 1164 aa9.65□□□□□ -0.86
CSMD1-208ENST00000520561 SCN5AQ14524 2016 aa9.65□□□□□ -0.87
CSMD1-208ENST00000520561 PDCD11Q14690 1871 aaKnown RBP9.64□□□□□ -0.87
CSMD1-208ENST00000520561 SMIM28A0A1B0GU29 152 aa9.64□□□□□ -0.87
CSMD1-208ENST00000520561 ARL5CA6NH57 179 aa9.64□□□□□ -0.87
CSMD1-208ENST00000520561 EPHB6O15197 1021 aa9.64□□□□□ -0.87
CSMD1-208ENST00000520561 EFCAB14O75071 495 aa9.64□□□□□ -0.87
CSMD1-208ENST00000520561 VNN1O95497 513 aa9.64□□□□□ -0.87
CSMD1-208ENST00000520561 THP07101 528 aa9.64□□□□□ -0.87
CSMD1-208ENST00000520561 CYP3A5P20815 502 aa9.64□□□□□ -0.87
CSMD1-208ENST00000520561 TBXAS1P24557 533 aaPredicted RBP9.64□□□□□ -0.87
CSMD1-208ENST00000520561 POLR2BP30876 1174 aaKnown RBP9.64□□□□□ -0.87
CSMD1-208ENST00000520561 ATICP31939 592 aa9.64□□□□□ -0.87
CSMD1-208ENST00000520561 KRT9P35527 623 aa9.64□□□□□ -0.87
CSMD1-208ENST00000520561 FXR1P51114 621 aaKnown RBP eCLIP9.64□□□□□ -0.87
CSMD1-208ENST00000520561 SCNN1GP51170 649 aa9.64□□□□□ -0.87
CSMD1-208ENST00000520561 GRIK3Q13003 919 aa9.64□□□□□ -0.87
CSMD1-208ENST00000520561 IKBKEQ14164 716 aa9.64□□□□□ -0.87
CSMD1-208ENST00000520561 IQCEQ6IPM2 695 aa9.64□□□□□ -0.87
CSMD1-208ENST00000520561 MFSD5Q6N075 450 aa9.64□□□□□ -0.87
CSMD1-208ENST00000520561 PDXDC1Q6P996 788 aa9.64□□□□□ -0.87
CSMD1-208ENST00000520561 ALKAL1Q6UXT8 129 aa9.64□□□□□ -0.87
CSMD1-208ENST00000520561 NPAS4Q8IUM7 802 aa9.64□□□□□ -0.87
CSMD1-208ENST00000520561 PPM1KQ8N3J5 372 aa9.64□□□□□ -0.87
CSMD1-208ENST00000520561 CCDC112Q8NEF3 446 aa9.64□□□□□ -0.87
CSMD1-208ENST00000520561 LMO3Q8TAP4 145 aa9.64□□□□□ -0.87
CSMD1-208ENST00000520561 RSPH1Q8WYR4 309 aa9.64□□□□□ -0.87
CSMD1-208ENST00000520561 TAF4BQ92750 862 aa9.64□□□□□ -0.87
CSMD1-208ENST00000520561 SEMA4DQ92854 862 aa9.64□□□□□ -0.87
CSMD1-208ENST00000520561 ZMAT2Q96NC0 199 aaKnown RBP9.64□□□□□ -0.87
CSMD1-208ENST00000520561 PI4K2AQ9BTU6 479 aa9.64□□□□□ -0.87
CSMD1-208ENST00000520561 SIX2Q9NPC8 291 aa9.64□□□□□ -0.87
CSMD1-208ENST00000520561 ZNHIT6Q9NWK9 470 aaKnown RBP9.64□□□□□ -0.87
CSMD1-208ENST00000520561 DPP3Q9NY33 737 aa9.64□□□□□ -0.87
CSMD1-208ENST00000520561 TUBGCP4Q9UGJ1 667 aa9.64□□□□□ -0.87
CSMD1-208ENST00000520561 FBXL5Q9UKA1 691 aa9.64□□□□□ -0.87
CSMD1-208ENST00000520561 DNAJC12Q9UKB3 198 aa9.64□□□□□ -0.87
CSMD1-208ENST00000520561 INPP5FQ9Y2H2 1132 aa9.64□□□□□ -0.87
CSMD1-208ENST00000520561 PCDHB7Q9Y5E2 793 aa9.64□□□□□ -0.87
CSMD1-208ENST00000520561 ALPK3Q96L96 1907 aa9.64□□□□□ -0.87
CSMD1-208ENST00000520561 ABHD14A-ACY1A0A1B0GW23 586 aa9.63□□□□□ -0.87
CSMD1-208ENST00000520561 CCDC85CA6NKD9 419 aa9.63□□□□□ -0.87
CSMD1-208ENST00000520561 MEIS3P2A8K0S8 358 aa9.63□□□□□ -0.87
CSMD1-208ENST00000520561 ENPP3O14638 875 aa9.63□□□□□ -0.87
CSMD1-208ENST00000520561 PTGESO14684 152 aa9.63□□□□□ -0.87
CSMD1-208ENST00000520561 INPPL1O15357 1258 aa9.63□□□□□ -0.87
CSMD1-208ENST00000520561 EVI5O60447 810 aa9.63□□□□□ -0.87
CSMD1-208ENST00000520561 BAIAP3O94812 1187 aa9.63□□□□□ -0.87
CSMD1-208ENST00000520561 NOL4O94818 638 aa9.63□□□□□ -0.87
CSMD1-208ENST00000520561 ASS1P00966 412 aaKnown RBP9.63□□□□□ -0.87
CSMD1-208ENST00000520561 P4HA1P13674 534 aa9.63□□□□□ -0.87
CSMD1-208ENST00000520561 CSF2RAP15509 400 aa9.63□□□□□ -0.87
CSMD1-208ENST00000520561 PNPLA4P41247 253 aa9.63□□□□□ -0.87
CSMD1-208ENST00000520561 GUCY2FP51841 1108 aa9.63□□□□□ -0.87
CSMD1-208ENST00000520561 MFAP3P55082 362 aa9.63□□□□□ -0.87
CSMD1-208ENST00000520561 ADKP55263 362 aaKnown RBP9.63□□□□□ -0.87
CSMD1-208ENST00000520561 MYL6P60660 151 aa9.63□□□□□ -0.87
CSMD1-208ENST00000520561 TNNC1P63316 161 aa9.63□□□□□ -0.87
CSMD1-208ENST00000520561 FAM189BP81408 668 aa9.63□□□□□ -0.87
CSMD1-208ENST00000520561 APBA1Q02410 837 aa9.63□□□□□ -0.87
CSMD1-208ENST00000520561 GCNT1Q02742 428 aa9.63□□□□□ -0.87
CSMD1-208ENST00000520561 GOLGA8FQ08AF8 430 aa9.63□□□□□ -0.87
CSMD1-208ENST00000520561 GOLGA8DPQ0D2H9 430 aa9.63□□□□□ -0.87
CSMD1-208ENST00000520561 MYO1EQ12965 1108 aa9.63□□□□□ -0.87
CSMD1-208ENST00000520561 ARHGAP44Q17R89 818 aa9.63□□□□□ -0.87
CSMD1-208ENST00000520561 SGSM1Q2NKQ1 1148 aa9.63□□□□□ -0.87
CSMD1-208ENST00000520561 ZNF667Q5HYK9 610 aa9.63□□□□□ -0.87
CSMD1-208ENST00000520561 GJB7Q6PEY0 223 aa9.63□□□□□ -0.87
CSMD1-208ENST00000520561 RRAGAQ7L523 313 aa9.63□□□□□ -0.87
CSMD1-208ENST00000520561 ENOSF1Q7L5Y1 443 aa9.63□□□□□ -0.87
CSMD1-208ENST00000520561 RTN4RL1Q86UN2 441 aaPredicted RBP9.63□□□□□ -0.87
CSMD1-208ENST00000520561 ARHGEF19Q8IW93 802 aa9.63□□□□□ -0.87
CSMD1-208ENST00000520561 LRRC52Q8N7C0 313 aa9.63□□□□□ -0.87
CSMD1-208ENST00000520561 TC2NQ8N9U0 490 aa9.63□□□□□ -0.87
CSMD1-208ENST00000520561 OR8K1Q8NGG5 319 aa9.63□□□□□ -0.87
CSMD1-208ENST00000520561 C18orf25Q96B23 403 aaPredicted RBP9.63□□□□□ -0.87
CSMD1-208ENST00000520561 ZFP42Q96MM3 310 aa9.63□□□□□ -0.87
CSMD1-208ENST00000520561 PPP1R10Q96QC0 940 aaKnown RBP9.63□□□□□ -0.87
CSMD1-208ENST00000520561 PANX2Q96RD6 677 aa9.63□□□□□ -0.87
CSMD1-208ENST00000520561 NIF3L1Q9GZT8 377 aa9.63□□□□□ -0.87
CSMD1-208ENST00000520561 UBE2TQ9NPD8 197 aaPredicted RBP9.63□□□□□ -0.87
CSMD1-208ENST00000520561 IL23AQ9NPF7 189 aa9.63□□□□□ -0.87
CSMD1-208ENST00000520561 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.63□□□□□ -0.87
CSMD1-208ENST00000520561 ABHD10Q9NUJ1 306 aa9.63□□□□□ -0.87
CSMD1-208ENST00000520561 SIX4Q9UIU6 781 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms