RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 PCDHGA6Q9Y5G7 932 aa5.2□□□□□ -1.58
SQLE-204ENST00000520493 PCDHGA3Q9Y5H0 932 aa5.2□□□□□ -1.58
SQLE-204ENST00000520493 PCDHGA2Q9Y5H1 932 aa5.2□□□□□ -1.58
SQLE-204ENST00000520493 LEFTY2O00292 366 aa5.19□□□□□ -1.58
SQLE-204ENST00000520493 NCR1O76036 304 aa5.19□□□□□ -1.58
SQLE-204ENST00000520493 ENDOD1O94919 500 aa5.19□□□□□ -1.58
SQLE-204ENST00000520493 GCP02774 474 aa5.19□□□□□ -1.58
SQLE-204ENST00000520493 IL2RBP14784 551 aa5.19□□□□□ -1.58
SQLE-204ENST00000520493 AGXTP21549 392 aa5.19□□□□□ -1.58
SQLE-204ENST00000520493 LPOP22079 712 aaPredicted RBP5.19□□□□□ -1.58
SQLE-204ENST00000520493 MTNR1BP49286 362 aa5.19□□□□□ -1.58
SQLE-204ENST00000520493 USP14P54578 494 aa5.19□□□□□ -1.58
SQLE-204ENST00000520493 ADKP55263 362 aaKnown RBP5.19□□□□□ -1.58
SQLE-204ENST00000520493 RHBDL3P58872 404 aa5.19□□□□□ -1.58
SQLE-204ENST00000520493 GBX1Q14549 363 aa5.19□□□□□ -1.58
SQLE-204ENST00000520493 ODF1Q14990 250 aa5.19□□□□□ -1.58
SQLE-204ENST00000520493 MFSD14BQ5SR56 506 aa5.19□□□□□ -1.58
SQLE-204ENST00000520493 MBNL2Q5VZF2 373 aaKnown RBP5.19□□□□□ -1.58
SQLE-204ENST00000520493 ANKS6Q68DC2 871 aa5.19□□□□□ -1.58
SQLE-204ENST00000520493 ARMC6Q6NXE6 501 aa5.19□□□□□ -1.58
SQLE-204ENST00000520493 GLCCI1Q86VQ1 547 aa5.19□□□□□ -1.58
SQLE-204ENST00000520493 SAMD3Q8N6K7 520 aa5.19□□□□□ -1.58
SQLE-204ENST00000520493 SENP6Q9GZR1 1112 aaPredicted RBP5.19□□□□□ -1.58
SQLE-204ENST00000520493 LANCL2Q9NS86 450 aa5.19□□□□□ -1.58
SQLE-204ENST00000520493 NOB1Q9ULX3 412 aaKnown RBP5.19□□□□□ -1.58
SQLE-204ENST00000520493 CHST2Q9Y4C5 530 aa5.19□□□□□ -1.58
SQLE-204ENST00000520493 GPR45Q9Y5Y3 372 aa5.19□□□□□ -1.58
SQLE-204ENST00000520493 HS3ST4Q9Y661 456 aa5.19□□□□□ -1.58
SQLE-204ENST00000520493 TEX33O43247 280 aa5.18□□□□□ -1.58
SQLE-204ENST00000520493 ADCY6O43306 1168 aa5.18□□□□□ -1.58
SQLE-204ENST00000520493 PRPF3O43395 683 aaKnown RBP5.18□□□□□ -1.58
SQLE-204ENST00000520493 NDUFA10O95299 355 aa5.18□□□□□ -1.58
SQLE-204ENST00000520493 HSPA6P17066 643 aa5.18□□□□□ -1.58
SQLE-204ENST00000520493 AVPR1BP47901 424 aa5.18□□□□□ -1.58
SQLE-204ENST00000520493 SRSF2Q01130 221 aaKnown RBP5.18□□□□□ -1.58
SQLE-204ENST00000520493 MALLQ13021 153 aa5.18□□□□□ -1.58
SQLE-204ENST00000520493 SP140Q13342 867 aa5.18□□□□□ -1.58
SQLE-204ENST00000520493 BIRC2Q13490 618 aa5.18□□□□□ -1.58
SQLE-204ENST00000520493 EPM2AIP1Q7L775 607 aaPredicted RBP5.18□□□□□ -1.58
SQLE-204ENST00000520493 ZNF572Q7Z3I7 529 aaPredicted RBP5.18□□□□□ -1.58
SQLE-204ENST00000520493 KCNK18Q7Z418 384 aa5.18□□□□□ -1.58
SQLE-204ENST00000520493 TPH2Q8IWU9 490 aa5.18□□□□□ -1.58
SQLE-204ENST00000520493 CMIPQ8IY22 773 aa5.18□□□□□ -1.58
SQLE-204ENST00000520493 DRC7Q8IY82 874 aa5.18□□□□□ -1.58
SQLE-204ENST00000520493 TRMT2AQ8IZ69 625 aaKnown RBP5.18□□□□□ -1.58
SQLE-204ENST00000520493 PQLC1Q8N2U9 271 aa5.18□□□□□ -1.58
SQLE-204ENST00000520493 LCORLQ8N3X6 602 aa5.18□□□□□ -1.58
SQLE-204ENST00000520493 TEKT5Q96M29 485 aa5.18□□□□□ -1.58
SQLE-204ENST00000520493 TMEM140Q9NV12 185 aa5.18□□□□□ -1.58
SQLE-204ENST00000520493 PACSIN3Q9UKS6 424 aa5.18□□□□□ -1.58
SQLE-204ENST00000520493 ATP11BQ9Y2G3 1177 aa5.18□□□□□ -1.58
SQLE-204ENST00000520493 USP15Q9Y4E8 981 aaPredicted RBP5.18□□□□□ -1.58
SQLE-204ENST00000520493 FPGT-TNNI3KV9GXZ4 949 aa5.18□□□□□ -1.58
SQLE-204ENST00000520493 CENPVL1A0A0U1RR11 272 aa5.17□□□□□ -1.58
SQLE-204ENST00000520493 TMEM200CA6NKL6 621 aa5.17□□□□□ -1.58
SQLE-204ENST00000520493 FAM171A2A8MVW0 826 aa5.17□□□□□ -1.58
SQLE-204ENST00000520493 CXorf49A8MYA2 514 aaPredicted RBP5.17□□□□□ -1.58
SQLE-204ENST00000520493 XPOTO43592 962 aaKnown RBP5.17□□□□□ -1.58
SQLE-204ENST00000520493 IL33O95760 270 aa5.17□□□□□ -1.58
SQLE-204ENST00000520493 RAP2AP10114 183 aa5.17□□□□□ -1.58
SQLE-204ENST00000520493 TRIM27P14373 513 aa5.17□□□□□ -1.58
SQLE-204ENST00000520493 PHKG2P15735 406 aa5.17□□□□□ -1.58
SQLE-204ENST00000520493 KRT4P19013 534 aa5.17□□□□□ -1.58
SQLE-204ENST00000520493 BMPR1AP36894 532 aa5.17□□□□□ -1.58
SQLE-204ENST00000520493 RAP2BP61225 183 aa5.17□□□□□ -1.58
SQLE-204ENST00000520493 FAM189BP81408 668 aa5.17□□□□□ -1.58
SQLE-204ENST00000520493 GUCY1B3Q02153 619 aa5.17□□□□□ -1.58
SQLE-204ENST00000520493 NOMO1Q15155 1222 aa5.17□□□□□ -1.58
SQLE-204ENST00000520493 CLUL1Q15846 466 aa5.17□□□□□ -1.58
SQLE-204ENST00000520493 BEAN1Q3B7T3 259 aa5.17□□□□□ -1.58
SQLE-204ENST00000520493 Q6ZPA2 131 aa5.17□□□□□ -1.58
SQLE-204ENST00000520493 C11orf96Q7Z7L8 435 aa5.17□□□□□ -1.58
SQLE-204ENST00000520493 SYT12Q8IV01 421 aa5.17□□□□□ -1.58
SQLE-204ENST00000520493 VRK3Q8IV63 474 aa5.17□□□□□ -1.58
SQLE-204ENST00000520493 CPEB3Q8NE35 698 aaKnown RBP5.17□□□□□ -1.58
SQLE-204ENST00000520493 SUPT20HQ8NEM7 779 aa5.17□□□□□ -1.58
SQLE-204ENST00000520493 REPS2Q8NFH8 660 aa5.17□□□□□ -1.58
SQLE-204ENST00000520493 JADE3Q92613 823 aa5.17□□□□□ -1.58
SQLE-204ENST00000520493 TTC17Q96AE7 1141 aa5.17□□□□□ -1.58
SQLE-204ENST00000520493 PHACTR3Q96KR7 559 aa5.17□□□□□ -1.58
SQLE-204ENST00000520493 AGAP2Q99490 1192 aa5.17□□□□□ -1.58
SQLE-204ENST00000520493 NMRK2Q9NPI5 230 aa5.17□□□□□ -1.58
SQLE-204ENST00000520493 C1orf112Q9NSG2 853 aa5.17□□□□□ -1.58
SQLE-204ENST00000520493 VSTM5A8MXK1 200 aa5.16□□□□□ -1.58
SQLE-204ENST00000520493 ZRANB2O95218 330 aaKnown RBP eCLIP5.16□□□□□ -1.58
SQLE-204ENST00000520493 ALOX15P16050 662 aaPredicted RBP5.16□□□□□ -1.58
SQLE-204ENST00000520493 ATP5JP18859 108 aa5.16□□□□□ -1.58
SQLE-204ENST00000520493 DDX6P26196 483 aaKnown RBP eCLIP5.16□□□□□ -1.58
SQLE-204ENST00000520493 SREBF1P36956 1147 aa5.16□□□□□ -1.58
SQLE-204ENST00000520493 CHN2P52757 468 aa5.16□□□□□ -1.58
SQLE-204ENST00000520493 BLOC1S1P78537 153 aa5.16□□□□□ -1.58
SQLE-204ENST00000520493 OS9Q13438 667 aaPredicted RBP5.16□□□□□ -1.58
SQLE-204ENST00000520493 SPDYE7PQ495Y7 208 aa5.16□□□□□ -1.58
SQLE-204ENST00000520493 PDCD4Q53EL6 469 aaKnown RBP5.16□□□□□ -1.58
SQLE-204ENST00000520493 ATAT1Q5SQI0 421 aa5.16□□□□□ -1.58
SQLE-204ENST00000520493 HECTD2Q5U5R9 776 aa5.16□□□□□ -1.58
SQLE-204ENST00000520493 Q6ZVL8 140 aa5.16□□□□□ -1.58
SQLE-204ENST00000520493 ARHGEF19Q8IW93 802 aa5.16□□□□□ -1.58
SQLE-204ENST00000520493 FAM43AQ8N2R8 423 aa5.16□□□□□ -1.58
SQLE-204ENST00000520493 MIER2Q8N344 545 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms