RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 COL4A3BPQ9Y5P4 624 aa8.65□□□□□ -1.02
CTHRC1-203ENST00000520337 EMSYQ7Z589 1322 aa8.64□□□□□ -1.03
CTHRC1-203ENST00000520337 LOC100289279A0A1B0GTE1 492 aa8.64□□□□□ -1.03
CTHRC1-203ENST00000520337 NOP56O00567 594 aaKnown RBP8.64□□□□□ -1.03
CTHRC1-203ENST00000520337 USO1O60763 962 aaKnown RBP8.64□□□□□ -1.03
CTHRC1-203ENST00000520337 MYBP10242 640 aa8.64□□□□□ -1.03
CTHRC1-203ENST00000520337 NMT1P30419 496 aaKnown RBP8.64□□□□□ -1.03
CTHRC1-203ENST00000520337 FANCCQ00597 558 aa8.64□□□□□ -1.03
CTHRC1-203ENST00000520337 SP3Q02447 781 aa8.64□□□□□ -1.03
CTHRC1-203ENST00000520337 BMT2Q1RMZ1 405 aa8.64□□□□□ -1.03
CTHRC1-203ENST00000520337 ZCWPW2Q504Y3 356 aa8.64□□□□□ -1.03
CTHRC1-203ENST00000520337 FAM160B1Q5W0V3 765 aa8.64□□□□□ -1.03
CTHRC1-203ENST00000520337 HGSNATQ68CP4 663 aa8.64□□□□□ -1.03
CTHRC1-203ENST00000520337 FOXR2Q6PJQ5 311 aa8.64□□□□□ -1.03
CTHRC1-203ENST00000520337 MAEAQ7L5Y9 396 aa8.64□□□□□ -1.03
CTHRC1-203ENST00000520337 ZNF720Q7Z2F6 126 aa8.64□□□□□ -1.03
CTHRC1-203ENST00000520337 TRMT1LQ7Z2T5 733 aaKnown RBP8.64□□□□□ -1.03
CTHRC1-203ENST00000520337 ZDHHC13Q8IUH4 622 aa8.64□□□□□ -1.03
CTHRC1-203ENST00000520337 CCNJLQ8IV13 435 aa8.64□□□□□ -1.03
CTHRC1-203ENST00000520337 MYCT1Q8N699 235 aa8.64□□□□□ -1.03
CTHRC1-203ENST00000520337 SMG8Q8ND04 991 aaKnown RBP8.64□□□□□ -1.03
CTHRC1-203ENST00000520337 PPTC7Q8NI37 304 aa8.64□□□□□ -1.03
CTHRC1-203ENST00000520337 ZNF507Q8TCN5 953 aa8.64□□□□□ -1.03
CTHRC1-203ENST00000520337 AFG1LQ8WV93 481 aa8.64□□□□□ -1.03
CTHRC1-203ENST00000520337 CEP170P1Q96L14 293 aa8.64□□□□□ -1.03
CTHRC1-203ENST00000520337 TRIM5Q9C035 493 aa8.64□□□□□ -1.03
CTHRC1-203ENST00000520337 KCTD10Q9H3F6 313 aa8.64□□□□□ -1.03
CTHRC1-203ENST00000520337 PARVGQ9HBI0 331 aa8.64□□□□□ -1.03
CTHRC1-203ENST00000520337 GPRC5CQ9NQ84 441 aa8.64□□□□□ -1.03
CTHRC1-203ENST00000520337 XPNPEP1Q9NQW7 623 aa8.64□□□□□ -1.03
CTHRC1-203ENST00000520337 SEL1LQ9UBV2 794 aa8.64□□□□□ -1.03
CTHRC1-203ENST00000520337 ZHX1Q9UKY1 873 aaPredicted RBP8.64□□□□□ -1.03
CTHRC1-203ENST00000520337 BICDL2A1A5D9 508 aa8.63□□□□□ -1.03
CTHRC1-203ENST00000520337 HMX2A2RU54 273 aa8.63□□□□□ -1.03
CTHRC1-203ENST00000520337 LRRC10BA6NIK2 292 aa8.63□□□□□ -1.03
CTHRC1-203ENST00000520337 NKRFO15226 690 aaKnown RBP eCLIP8.63□□□□□ -1.03
CTHRC1-203ENST00000520337 GAS2O43903 313 aaKnown RBP8.63□□□□□ -1.03
CTHRC1-203ENST00000520337 PPFIA4O75335 1185 aa8.63□□□□□ -1.03
CTHRC1-203ENST00000520337 PRPF6O94906 941 aaKnown RBP8.63□□□□□ -1.03
CTHRC1-203ENST00000520337 PLS3P13797 630 aa8.63□□□□□ -1.03
CTHRC1-203ENST00000520337 FLT3LGP49771 235 aa8.63□□□□□ -1.03
CTHRC1-203ENST00000520337 SLC26A2P50443 739 aa8.63□□□□□ -1.03
CTHRC1-203ENST00000520337 SOX10P56693 466 aa8.63□□□□□ -1.03
CTHRC1-203ENST00000520337 TPM4P67936 248 aa8.63□□□□□ -1.03
CTHRC1-203ENST00000520337 TNFAIP2Q03169 654 aa8.63□□□□□ -1.03
CTHRC1-203ENST00000520337 PLCB4Q15147 1175 aa8.63□□□□□ -1.03
CTHRC1-203ENST00000520337 MTERF2Q49AM1 385 aa8.63□□□□□ -1.03
CTHRC1-203ENST00000520337 HSP90AA4PQ58FG1 418 aa8.63□□□□□ -1.03
CTHRC1-203ENST00000520337 BEND4Q6ZU67 534 aa8.63□□□□□ -1.03
CTHRC1-203ENST00000520337 MTERF4Q7Z6M4 381 aaKnown RBP8.63□□□□□ -1.03
CTHRC1-203ENST00000520337 TRPV1Q8NER1 839 aa8.63□□□□□ -1.03
CTHRC1-203ENST00000520337 ATP8B4Q8TF62 1192 aa8.63□□□□□ -1.03
CTHRC1-203ENST00000520337 MRFAP1L1Q96HT8 127 aa8.63□□□□□ -1.03
CTHRC1-203ENST00000520337 FAM129BQ96TA1 746 aa8.63□□□□□ -1.03
CTHRC1-203ENST00000520337 NTPCRQ9BSD7 190 aaKnown RBP8.63□□□□□ -1.03
CTHRC1-203ENST00000520337 C16orf70Q9BSU1 422 aa8.63□□□□□ -1.03
CTHRC1-203ENST00000520337 SRRTQ9BXP5 876 aaKnown RBP8.63□□□□□ -1.03
CTHRC1-203ENST00000520337 PDCL3Q9H2J4 239 aa8.63□□□□□ -1.03
CTHRC1-203ENST00000520337 KCNF1Q9H3M0 494 aa8.63□□□□□ -1.03
CTHRC1-203ENST00000520337 RNPEPQ9H4A4 650 aa8.63□□□□□ -1.03
CTHRC1-203ENST00000520337 SMARCAD1Q9H4L7 1026 aa8.63□□□□□ -1.03
CTHRC1-203ENST00000520337 DHX33Q9H6R0 707 aaKnown RBP8.63□□□□□ -1.03
CTHRC1-203ENST00000520337 AZI2Q9H6S1 392 aa8.63□□□□□ -1.03
CTHRC1-203ENST00000520337 MRPL44Q9H9J2 332 aaKnown RBP8.63□□□□□ -1.03
CTHRC1-203ENST00000520337 GOLGA2P5Q9HBQ8 144 aa8.63□□□□□ -1.03
CTHRC1-203ENST00000520337 NRBP2Q9NSY0 501 aa8.63□□□□□ -1.03
CTHRC1-203ENST00000520337 INTS13Q9NVM9 706 aa8.63□□□□□ -1.03
CTHRC1-203ENST00000520337 IFNKQ9P0W0 207 aa8.63□□□□□ -1.03
CTHRC1-203ENST00000520337 SCN10AQ9Y5Y9 1956 aa8.62□□□□□ -1.03
CTHRC1-203ENST00000520337 A0A096LPE4 126 aa8.62□□□□□ -1.03
CTHRC1-203ENST00000520337 A0A1W2PP55 124 aa8.62□□□□□ -1.03
CTHRC1-203ENST00000520337 A0A1W2PPZ6 126 aa8.62□□□□□ -1.03
CTHRC1-203ENST00000520337 KIAA1324LA8MWY0 1029 aaPredicted RBP8.62□□□□□ -1.03
CTHRC1-203ENST00000520337 EIF3DO15371 548 aaKnown RBP eCLIP8.62□□□□□ -1.03
CTHRC1-203ENST00000520337 TGFB1I1O43294 461 aa8.62□□□□□ -1.03
CTHRC1-203ENST00000520337 GCNT3O95395 438 aa8.62□□□□□ -1.03
CTHRC1-203ENST00000520337 LGALS2P05162 132 aa8.62□□□□□ -1.03
CTHRC1-203ENST00000520337 MMP3P08254 477 aa8.62□□□□□ -1.03
CTHRC1-203ENST00000520337 MARK3P27448 753 aa8.62□□□□□ -1.03
CTHRC1-203ENST00000520337 ARL2P36404 184 aa8.62□□□□□ -1.03
CTHRC1-203ENST00000520337 GRIK1P39086 918 aa8.62□□□□□ -1.03
CTHRC1-203ENST00000520337 RTP1P59025 263 aa8.62□□□□□ -1.03
CTHRC1-203ENST00000520337 PRKCZQ05513 592 aa8.62□□□□□ -1.03
CTHRC1-203ENST00000520337 LRRC63Q05C16 580 aa8.62□□□□□ -1.03
CTHRC1-203ENST00000520337 NR1I3Q14994 352 aa8.62□□□□□ -1.03
CTHRC1-203ENST00000520337 EMC2Q15006 297 aa8.62□□□□□ -1.03
CTHRC1-203ENST00000520337 KNOP1Q1ED39 458 aaKnown RBP8.62□□□□□ -1.03
CTHRC1-203ENST00000520337 ZC2HC1CQ53FD0 456 aaPredicted RBP8.62□□□□□ -1.03
CTHRC1-203ENST00000520337 TCP11X2Q5H9J9 407 aa8.62□□□□□ -1.03
CTHRC1-203ENST00000520337 EXOSC6Q5RKV6 272 aaKnown RBP8.62□□□□□ -1.03
CTHRC1-203ENST00000520337 ODR4Q5SWX8 454 aa8.62□□□□□ -1.03
CTHRC1-203ENST00000520337 FAM102BQ5T8I3 360 aa8.62□□□□□ -1.03
CTHRC1-203ENST00000520337 LRRC55Q6ZSA7 311 aa8.62□□□□□ -1.03
CTHRC1-203ENST00000520337 KSR1Q8IVT5 923 aa8.62□□□□□ -1.03
CTHRC1-203ENST00000520337 NELFCDQ8IXH7 590 aa8.62□□□□□ -1.03
CTHRC1-203ENST00000520337 FAM178BQ8IXR5 827 aa8.62□□□□□ -1.03
CTHRC1-203ENST00000520337 ZC3H3Q8IXZ2 948 aaKnown RBP8.62□□□□□ -1.03
CTHRC1-203ENST00000520337 CSGALNACT2Q8N6G5 542 aa8.62□□□□□ -1.03
CTHRC1-203ENST00000520337 MCPH1Q8NEM0 835 aa8.62□□□□□ -1.03
CTHRC1-203ENST00000520337 OR6J1Q8NGC5 347 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms