RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 MMRN2Q9H8L6 949 aa19.23■□□□□ 0.67
SDC2-205ENST00000520233 DPP3Q9NY33 737 aa19.23■□□□□ 0.67
SDC2-205ENST00000520233 TUBGCP4Q9UGJ1 667 aa19.23■□□□□ 0.67
SDC2-205ENST00000520233 ITGA11Q9UKX5 1188 aa19.23■□□□□ 0.67
SDC2-205ENST00000520233 INSL6Q9Y581 213 aa19.23■□□□□ 0.67
SDC2-205ENST00000520233 COL4A6Q14031 1691 aa19.23■□□□□ 0.67
SDC2-205ENST00000520233 PTPRSQ13332 1948 aa19.23■□□□□ 0.67
SDC2-205ENST00000520233 P4HA2O15460 535 aa19.22■□□□□ 0.67
SDC2-205ENST00000520233 DDHD2O94830 711 aa19.22■□□□□ 0.67
SDC2-205ENST00000520233 SERPINC1P01008 464 aa19.22■□□□□ 0.67
SDC2-205ENST00000520233 LRPAP1P30533 357 aa19.22■□□□□ 0.67
SDC2-205ENST00000520233 BTG3Q14201 252 aaPredicted RBP19.22■□□□□ 0.67
SDC2-205ENST00000520233 CBWD6Q4V339 395 aa19.22■□□□□ 0.67
SDC2-205ENST00000520233 CBWD3Q5JTY5 395 aa19.22■□□□□ 0.67
SDC2-205ENST00000520233 CBWD5Q5RIA9 395 aa19.22■□□□□ 0.67
SDC2-205ENST00000520233 TDRD10Q5VZ19 366 aaKnown RBP19.22■□□□□ 0.67
SDC2-205ENST00000520233 ZNF280BQ86YH2 543 aa19.22■□□□□ 0.67
SDC2-205ENST00000520233 COLGALT2Q8IYK4 626 aa19.22■□□□□ 0.67
SDC2-205ENST00000520233 C1orf127Q8N9H9 656 aa19.22■□□□□ 0.67
SDC2-205ENST00000520233 FAM84AQ96KN4 292 aa19.22■□□□□ 0.67
SDC2-205ENST00000520233 UROC1Q96N76 676 aa19.22■□□□□ 0.67
SDC2-205ENST00000520233 FAM193BQ96PV7 902 aaPredicted RBP19.22■□□□□ 0.67
SDC2-205ENST00000520233 TLL1O43897 1013 aa19.21■□□□□ 0.67
SDC2-205ENST00000520233 PHACTR2O75167 634 aa19.21■□□□□ 0.67
SDC2-205ENST00000520233 RPL9P32969 192 aaKnown RBP19.21■□□□□ 0.67
SDC2-205ENST00000520233 GUCY2FP51841 1108 aa19.21■□□□□ 0.67
SDC2-205ENST00000520233 BIRC3Q13489 604 aa19.21■□□□□ 0.67
SDC2-205ENST00000520233 PDCD11Q14690 1871 aaKnown RBP19.21■□□□□ 0.67
SDC2-205ENST00000520233 FILIP1LQ4L180 1135 aa19.21■□□□□ 0.67
SDC2-205ENST00000520233 CXorf38Q8TB03 319 aa19.21■□□□□ 0.67
SDC2-205ENST00000520233 SP7Q8TDD2 431 aaPredicted RBP19.21■□□□□ 0.67
SDC2-205ENST00000520233 DDX27Q96GQ7 796 aaKnown RBP19.21■□□□□ 0.67
SDC2-205ENST00000520233 PRO3102Q9H379 93 aa19.21■□□□□ 0.67
SDC2-205ENST00000520233 NRDE2Q9H7Z3 1164 aa19.21■□□□□ 0.67
SDC2-205ENST00000520233 GOLGA2P5Q9HBQ8 144 aa19.21■□□□□ 0.67
SDC2-205ENST00000520233 COQ4Q9Y3A0 265 aa19.21■□□□□ 0.67
SDC2-205ENST00000520233 FNDC1Q4ZHG4 1894 aaPredicted RBP19.2■□□□□ 0.66
SDC2-205ENST00000520233 A0A1B0GTH6 734 aa19.2■□□□□ 0.66
SDC2-205ENST00000520233 ANO9A1A5B4 782 aa19.2■□□□□ 0.66
SDC2-205ENST00000520233 LGALS16A8MUM7 142 aa19.2■□□□□ 0.66
SDC2-205ENST00000520233 PES1O00541 588 aaKnown RBP19.2■□□□□ 0.66
SDC2-205ENST00000520233 VNN1O95497 513 aa19.2■□□□□ 0.66
SDC2-205ENST00000520233 ITGB3P05106 788 aa19.2■□□□□ 0.66
SDC2-205ENST00000520233 RBP5P82980 135 aa19.2■□□□□ 0.66
SDC2-205ENST00000520233 MYL7Q01449 175 aa19.2■□□□□ 0.66
SDC2-205ENST00000520233 CETN1Q12798 172 aa19.2■□□□□ 0.66
SDC2-205ENST00000520233 TDHQ8IZJ6 230 aa19.2■□□□□ 0.66
SDC2-205ENST00000520233 NAP1L5Q96NT1 182 aaPredicted RBP19.2■□□□□ 0.66
SDC2-205ENST00000520233 TMEM175Q9BSA9 504 aa19.2■□□□□ 0.66
SDC2-205ENST00000520233 CWH43Q9H720 699 aa19.2■□□□□ 0.66
SDC2-205ENST00000520233 RTN4Q9NQC3 1192 aaKnown RBP19.2■□□□□ 0.66
SDC2-205ENST00000520233 SIX4Q9UIU6 781 aa19.2■□□□□ 0.66
SDC2-205ENST00000520233 TRIP11Q15643 1979 aa19.19■□□□□ 0.66
SDC2-205ENST00000520233 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.19■□□□□ 0.66
SDC2-205ENST00000520233 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.19■□□□□ 0.66
SDC2-205ENST00000520233 GTPBP10A4D1E9 387 aaKnown RBP19.19■□□□□ 0.66
SDC2-205ENST00000520233 CASTOR2A6NHX0 329 aa19.19■□□□□ 0.66
SDC2-205ENST00000520233 PIRO00625 290 aa19.19■□□□□ 0.66
SDC2-205ENST00000520233 B4GALT3O60512 393 aa19.19■□□□□ 0.66
SDC2-205ENST00000520233 CST3P01034 146 aaPredicted RBP19.19■□□□□ 0.66
SDC2-205ENST00000520233 UBASH3AP57075 661 aa19.19■□□□□ 0.66
SDC2-205ENST00000520233 TRPC3Q13507 836 aa19.19■□□□□ 0.66
SDC2-205ENST00000520233 NCOA4Q13772 614 aa19.19■□□□□ 0.66
SDC2-205ENST00000520233 FKBP15Q5T1M5 1219 aa19.19■□□□□ 0.66
SDC2-205ENST00000520233 C9orf57Q5W0N0 161 aa19.19■□□□□ 0.66
SDC2-205ENST00000520233 SARM1Q6SZW1 724 aa19.19■□□□□ 0.66
SDC2-205ENST00000520233 TMEM130Q8N3G9 435 aa19.19■□□□□ 0.66
SDC2-205ENST00000520233 FIBCD1Q8N539 461 aa19.19■□□□□ 0.66
SDC2-205ENST00000520233 FBXL13Q8NEE6 735 aa19.19■□□□□ 0.66
SDC2-205ENST00000520233 TAS1R2Q8TE23 839 aa19.19■□□□□ 0.66
SDC2-205ENST00000520233 HCSTQ9UBK5 93 aa19.19■□□□□ 0.66
SDC2-205ENST00000520233 DNAJB4Q9UDY4 337 aa19.19■□□□□ 0.66
SDC2-205ENST00000520233 AGAP1Q9UPQ3 857 aa19.19■□□□□ 0.66
SDC2-205ENST00000520233 R3HCC1Q9Y3T6 440 aaKnown RBP19.19■□□□□ 0.66
SDC2-205ENST00000520233 TDRD15B5MCY1 1934 aaKnown RBP19.18■□□□□ 0.66
SDC2-205ENST00000520233 FSD2A1L4K1 749 aa19.18■□□□□ 0.66
SDC2-205ENST00000520233 CARNS1A5YM72 827 aa19.18■□□□□ 0.66
SDC2-205ENST00000520233 GOLGA6L3A6NEY3 463 aa19.18■□□□□ 0.66
SDC2-205ENST00000520233 PODXLO00592 558 aa19.18■□□□□ 0.66
SDC2-205ENST00000520233 ZC3H11AO75152 810 aaKnown RBP eCLIP19.18■□□□□ 0.668e-7■■□□□ 13.7
SDC2-205ENST00000520233 HLA-DRAP01903 254 aa19.18■□□□□ 0.66
SDC2-205ENST00000520233 ALDH2P05091 517 aa19.18■□□□□ 0.66
SDC2-205ENST00000520233 KRT19P08727 400 aa19.18■□□□□ 0.66
SDC2-205ENST00000520233 POLR2BP30876 1174 aaKnown RBP19.18■□□□□ 0.66
SDC2-205ENST00000520233 PIK3CAP42336 1068 aa19.18■□□□□ 0.66
SDC2-205ENST00000520233 CLCNKBP51801 687 aa19.18■□□□□ 0.66
SDC2-205ENST00000520233 NR1I3Q14994 352 aa19.18■□□□□ 0.66
SDC2-205ENST00000520233 UPP1Q16831 310 aa19.18■□□□□ 0.66
SDC2-205ENST00000520233 EPC2Q52LR7 807 aa19.18■□□□□ 0.66
SDC2-205ENST00000520233 FAM109BQ6ICB4 259 aaPredicted RBP19.18■□□□□ 0.66
SDC2-205ENST00000520233 DCLRE1AQ6PJP8 1040 aa19.18■□□□□ 0.66
SDC2-205ENST00000520233 CHRDL2Q6WN34 429 aa19.18■□□□□ 0.66
SDC2-205ENST00000520233 GBP6Q6ZN66 633 aa19.18■□□□□ 0.66
SDC2-205ENST00000520233 LRRC52Q8N7C0 313 aa19.18■□□□□ 0.66
SDC2-205ENST00000520233 RAB20Q9NX57 234 aa19.18■□□□□ 0.66
SDC2-205ENST00000520233 IFNKQ9P0W0 207 aa19.18■□□□□ 0.66
SDC2-205ENST00000520233 PCDHA11Q9Y5I1 949 aa19.18■□□□□ 0.66
SDC2-205ENST00000520233 MRPL42Q9Y6G3 142 aaKnown RBP19.18■□□□□ 0.66
SDC2-205ENST00000520233 GRXCR1A8MXD5 290 aa19.17■□□□□ 0.66
SDC2-205ENST00000520233 NRP1O14786 923 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms